CircRNA Information

General Information
circRNA Basic Information
CircID chr13:106492884|106493000
Strand +
CircType exon
Host Gene ENSG00000125266.6;
Algorism CIRI2;
Sequence CTAATGTCCCGATGCCTCCCTTGAGGGTTTGAGAGCCCGCGTGCTGGAGAATTGACTGAAGCACAGCACCGGGGGAGAGGGACACTCCTCCTCGGAAGAGCCCGTCGCGCTGGACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:106492884|106493000 hsa-miR-198 0 0 1
chr13:106492884|106493000 hsa-miR-122-5p 0 0 1
chr13:106492884|106493000 hsa-miR-122-3p 0 0 1
chr13:106492884|106493000 hsa-miR-636 0 0 1
chr13:106492884|106493000 hsa-miR-650 0 0 1
chr13:106492884|106493000 hsa-miR-766-5p 0 0 1
chr13:106492884|106493000 hsa-miR-766-3p 0 0 1
chr13:106492884|106493000 hsa-miR-765 0 0 1
chr13:106492884|106493000 hsa-miR-1236-5p 0 0 1
chr13:106492884|106493000 hsa-miR-1236-3p 0 0 1
chr13:106492884|106493000 hsa-miR-1250-5p 0 0 1
chr13:106492884|106493000 hsa-miR-1250-3p 0 0 1
chr13:106492884|106493000 hsa-miR-1321 0 0 1
chr13:106492884|106493000 hsa-miR-338-3p 0 0 1
chr13:106492884|106493000 hsa-miR-515-5p 0 0 1
chr13:106492884|106493000 hsa-miR-151-5p 0 0 1
chr13:106492884|106493000 hsa-miR-371-5p 0 0 1
chr13:106492884|106493000 hsa-miR-642 0 0 1
chr13:106492884|106493000 hsa-miR-218 0 0 1
chr13:106492884|106493000 hsa-miR-3612 0 1 0
chr13:106492884|106493000 hsa-miR-3977 0 1 0
chr13:106492884|106493000 hsa-miR-4634 1 0 0
chr13:106492884|106493000 hsa-miR-6892-3p 0 1 0
chr13:106492884|106493000 hsa-miR-4783-3p 1 1 0
chr13:106492884|106493000 hsa-miR-92b-5p 1 0 0
chr13:106492884|106493000 hsa-miR-4646-3p 0 1 0
chr13:106492884|106493000 hsa-miR-4707-5p 1 0 0
chr13:106492884|106493000 hsa-miR-642a-5p 0 1 0
chr13:106492884|106493000 hsa-miR-320a-5p 0 1 0
chr13:106492884|106493000 hsa-miR-6791-5p 1 0 0
chr13:106492884|106493000 hsa-miR-513c-5p 0 1 0
chr13:106492884|106493000 hsa-miR-371a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr13:106492884|106493000
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence LSSATGSSEEECPSPPVLCFSQFSSTRALKPSREASGH
Nucleotide Sequence CTGTCCAGCGCGACGGGCTCTTCCGAGGAGGAGTGTCCCTCTCCCCCGGTGCTGTGCTTCAGTCAATTCTCCAGCACGCGGGCTCTCAAACCCTCAAGGGAGGCATCGGGACATTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites