CircRNA Information

General Information
circRNA Basic Information
CircID chr13:110176496|110176912
Strand -
CircType exon
Host Gene ENSG00000187498.13;
Algorism CIRI2;
Sequence CTGGATCACCTTTAGGTCCTGGCTGCCCAGGCTGTCCTGCCTGCCCGTCCTTTCCAGGCACTCCTGGGGTCCCAGGGTCTCCTCGGGATCCCTTCTCACCAATTGGTCCAATTTGTCCTACACATCAGAGAAGAAAATAGCAATGACCCGCATTTGCTTGCAAGCAAGTTGCTGCAGAAACGCAGGTTGGTTTGGTTATTATTTATGGAGGACCCGATAACCCAGGAAAGGCACATTGTGGTTCCGAGCTTGGCCATGAGAAGCCTCCTGGACTTGCCTTTCTCTCCTTGGTCTCCTTTCTGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:110176496|110176912 hsa-miR-107 0 0 1
chr13:110176496|110176912 hsa-miR-185-5p 0 0 1
chr13:110176496|110176912 hsa-miR-185-3p 0 0 1
chr13:110176496|110176912 hsa-miR-519e-5p 0 0 1
chr13:110176496|110176912 hsa-miR-519e-3p 0 0 1
chr13:110176496|110176912 hsa-miR-504-5p 0 0 1
chr13:110176496|110176912 hsa-miR-504-3p 0 0 1
chr13:110176496|110176912 hsa-miR-612 0 1 1
chr13:110176496|110176912 hsa-miR-616-5p 0 0 1
chr13:110176496|110176912 hsa-miR-616-3p 0 0 1
chr13:110176496|110176912 hsa-miR-640 0 0 1
chr13:110176496|110176912 hsa-miR-661 0 1 1
chr13:110176496|110176912 hsa-miR-891b 0 0 1
chr13:110176496|110176912 hsa-miR-665 0 1 1
chr13:110176496|110176912 hsa-miR-940 0 1 1
chr13:110176496|110176912 hsa-miR-942-5p 0 0 1
chr13:110176496|110176912 hsa-miR-942-3p 0 0 1
chr13:110176496|110176912 hsa-miR-1205 0 0 1
chr13:110176496|110176912 hsa-miR-1286 0 0 1
chr13:110176496|110176912 hsa-miR-1253 0 0 1
chr13:110176496|110176912 hsa-miR-548m 0 0 1
chr13:110176496|110176912 hsa-miR-1197 0 0 1
chr13:110176496|110176912 hsa-miR-1184 0 1 1
chr13:110176496|110176912 hsa-miR-875-3p 0 0 1
chr13:110176496|110176912 hsa-miR-455-5p 0 0 1
chr13:110176496|110176912 hsa-miR-515-3p 0 0 1
chr13:110176496|110176912 hsa-miR-105 0 0 1
chr13:110176496|110176912 hsa-miR-151-5p 0 0 1
chr13:110176496|110176912 hsa-miR-550 0 0 1
chr13:110176496|110176912 hsa-miR-103 0 0 1
chr13:110176496|110176912 hsa-miR-1300 0 0 1
chr13:110176496|110176912 hsa-miR-1285 0 0 1
chr13:110176496|110176912 hsa-miR-544 0 0 1
chr13:110176496|110176912 hsa-miR-1254 0 0 1
chr13:110176496|110176912 hsa-miR-768-3p 0 0 1
chr13:110176496|110176912 hsa-miR-886-3p 0 0 1
chr13:110176496|110176912 hsa-miR-638 1 0 0
chr13:110176496|110176912 hsa-miR-762 1 0 0
chr13:110176496|110176912 hsa-miR-2861 1 0 0
chr13:110176496|110176912 hsa-miR-3141 1 0 0
chr13:110176496|110176912 hsa-miR-3147 1 0 0
chr13:110176496|110176912 hsa-miR-3154 0 1 0
chr13:110176496|110176912 hsa-miR-3188 0 1 0
chr13:110176496|110176912 hsa-miR-4298 1 0 0
chr13:110176496|110176912 hsa-miR-4306 0 1 0
chr13:110176496|110176912 hsa-miR-4253 1 0 0
chr13:110176496|110176912 hsa-miR-3909 1 0 0
chr13:110176496|110176912 hsa-miR-4428 0 1 0
chr13:110176496|110176912 hsa-miR-4498 1 0 0
chr13:110176496|110176912 hsa-miR-4514 0 1 0
chr13:110176496|110176912 hsa-miR-3978 0 1 0
chr13:110176496|110176912 hsa-miR-4644 0 1 0
chr13:110176496|110176912 hsa-miR-4688 1 0 0
chr13:110176496|110176912 hsa-miR-4706 1 0 0
chr13:110176496|110176912 hsa-miR-4784 1 1 0
chr13:110176496|110176912 hsa-miR-6860 1 0 0
chr13:110176496|110176912 hsa-miR-4433b-3p 1 1 0
chr13:110176496|110176912 hsa-miR-6840-3p 0 1 0
chr13:110176496|110176912 hsa-miR-4433a-3p 0 1 0
chr13:110176496|110176912 hsa-miR-6861-5p 1 0 0
chr13:110176496|110176912 hsa-miR-4786-5p 0 1 0
chr13:110176496|110176912 hsa-miR-4768-3p 0 1 0
chr13:110176496|110176912 hsa-miR-6089 1 0 0
chr13:110176496|110176912 hsa-miR-7847-3p 1 0 0
chr13:110176496|110176912 hsa-miR-4695-5p 1 1 0
chr13:110176496|110176912 hsa-miR-4722-5p 1 0 0
chr13:110176496|110176912 hsa-miR-4755-3p 1 1 0
chr13:110176496|110176912 hsa-miR-6806-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6772-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6798-5p 1 0 0
chr13:110176496|110176912 hsa-miR-3150b-3p 0 1 0
chr13:110176496|110176912 hsa-miR-5008-5p 0 1 0
chr13:110176496|110176912 hsa-miR-6815-3p 0 1 0
chr13:110176496|110176912 hsa-miR-1343-3p 0 1 0
chr13:110176496|110176912 hsa-miR-6740-5p 1 0 0
chr13:110176496|110176912 hsa-miR-1229-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6753-5p 0 1 0
chr13:110176496|110176912 hsa-miR-1228-5p 1 0 0
chr13:110176496|110176912 hsa-miR-92b-5p 1 1 0
chr13:110176496|110176912 hsa-miR-4713-3p 0 1 0
chr13:110176496|110176912 hsa-miR-4446-3p 1 0 0
chr13:110176496|110176912 hsa-miR-6742-3p 0 1 0
chr13:110176496|110176912 hsa-miR-4776-5p 0 1 0
chr13:110176496|110176912 hsa-miR-7112-5p 1 1 0
chr13:110176496|110176912 hsa-miR-6715a-3p 0 1 0
chr13:110176496|110176912 hsa-miR-3144-5p 0 1 0
chr13:110176496|110176912 hsa-miR-99a-3p 0 1 0
chr13:110176496|110176912 hsa-miR-1207-5p 1 1 0
chr13:110176496|110176912 hsa-miR-4763-3p 1 0 0
chr13:110176496|110176912 hsa-miR-6816-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6893-5p 0 1 0
chr13:110176496|110176912 hsa-miR-6743-5p 1 0 0
chr13:110176496|110176912 hsa-miR-7107-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6774-5p 1 1 0
chr13:110176496|110176912 hsa-miR-6797-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6808-5p 0 1 0
chr13:110176496|110176912 hsa-miR-3620-5p 1 0 0
chr13:110176496|110176912 hsa-miR-4728-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6836-5p 1 0 0
chr13:110176496|110176912 hsa-miR-10526-3p 0 1 0
chr13:110176496|110176912 hsa-miR-328-5p 1 0 0
chr13:110176496|110176912 hsa-miR-4632-5p 1 0 0
chr13:110176496|110176912 hsa-miR-4685-5p 0 1 0
chr13:110176496|110176912 hsa-miR-6735-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6889-5p 0 1 0
chr13:110176496|110176912 hsa-miR-3187-5p 1 1 0
chr13:110176496|110176912 hsa-miR-6511b-5p 1 1 0
chr13:110176496|110176912 hsa-miR-10398-3p 1 0 0
chr13:110176496|110176912 hsa-miR-3173-3p 0 1 0
chr13:110176496|110176912 hsa-miR-4646-5p 1 0 0
chr13:110176496|110176912 hsa-miR-6876-5p 1 1 0
chr13:110176496|110176912 hsa-miR-6791-5p 1 1 0
chr13:110176496|110176912 hsa-miR-550a-3-5p 0 1 0
chr13:110176496|110176912 hsa-miR-550a-5p 0 1 0
chr13:110176496|110176912 hsa-miR-769-3p 0 1 0
chr13:110176496|110176912 hsa-miR-6783-3p 0 1 0
chr13:110176496|110176912 hsa-miR-4691-5p 1 0 0
chr13:110176496|110176912 hsa-miR-33b-3p 1 0 0
chr13:110176496|110176912 hsa-miR-10527-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr13:110176496|110176912
ORF Type ORF1
Protein Length 95
Nucleotide Length 285
Protein Sequence MAAQAVLPARPFQALLGSQGLLGIPSHQLVQFVLHIREENSNDPHLLASKLLQKRRLVWLLFMEDPITQERHIVVPSLAMRSLLDLPFSPWSPFW
Nucleotide Sequence CTGGCTGCCCAGGCTGTCCTGCCTGCCCGTCCTTTCCAGGCACTCCTGGGGTCCCAGGGTCTCCTCGGGATCCCTTCTCACCAATTGGTCCAATTTGTCCTACACATCAGAGAAGAAAATAGCAATGACCCGCATTTGCTTGCAAGCAAGTTGCTGCAGAAACGCAGGTTGGTTTGGTTATTATTTATGGAGGACCCGATAACCCAGGAAAGGCACATTGTGGTTCCGAGCTTGGCCATGAGAAGCCTCCTGGACTTGCCTTTCTCTCCTTGGTCTCCTTTCTGG

CircID chr13:110176496|110176912
ORF Type ORF2
Protein Length 65
Nucleotide Length 198
Protein Sequence MPRLSCLPVLSRHSWGPRVSSGSLLTNWSNLSYTSEKKIAMTRICLQASCCRNAGWFGYYLWRTR
Nucleotide Sequence CTGCCCAGGCTGTCCTGCCTGCCCGTCCTTTCCAGGCACTCCTGGGGTCCCAGGGTCTCCTCGGGATCCCTTCTCACCAATTGGTCCAATTTGTCCTACACATCAGAGAAGAAAATAGCAATGACCCGCATTTGCTTGCAAGCAAGTTGCTGCAGAAACGCAGGTTGGTTTGGTTATTATTTATGGAGGACCCGATAA

CircID chr13:110176496|110176912
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MVIIYGGPDNPGKAHCGSELGHEKPPGLAFLSLVSFLA
Nucleotide Sequence TTGGTTATTATTTATGGAGGACCCGATAACCCAGGAAAGGCACATTGTGGTTCCGAGCTTGGCCATGAGAAGCCTCCTGGACTTGCCTTTCTCTCCTTGGTCTCCTTTCTGGCC

CircID chr13:110176496|110176912
ORF Type ORF4
Protein Length 53
Nucleotide Length 162
Protein Sequence MAKLGTTMCLSWVIGSSINNNQTNLRFCSNLLASKCGSLLFSSLMCRTNWTNW
Nucleotide Sequence ATGGCCAAGCTCGGAACCACAATGTGCCTTTCCTGGGTTATCGGGTCCTCCATAAATAATAACCAAACCAACCTGCGTTTCTGCAGCAACTTGCTTGCAAGCAAATGCGGGTCATTGCTATTTTCTTCTCTGATGTGTAGGACAAATTGGACCAATTGGTGA

CircID chr13:110176496|110176912
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MDQLVRRDPEETLGPQECLERTGRQDSLGSQDLKVIQ
Nucleotide Sequence TTGGACCAATTGGTGAGAAGGGATCCCGAGGAGACCCTGGGACCCCAGGAGTGCCTGGAAAGGACGGGCAGGCAGGACAGCCTGGGCAGCCAGGACCTAAAGGTGATCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites