CircRNA Information

General Information
circRNA Basic Information
CircID chr13:113323011|113323181
Strand +
CircType exon
Host Gene ENSG00000185896.10;
Algorism CIRI2;
Sequence GCCCAAGGACGTGCCGCCACTGGAACGAGGCCGCCAGCCACGTGTGGCCCGTCCTGGCCTTTAAAGCTGAACTGAAGCGCTCCAGACACTCATCTCTGGAGTTCCTCTGTCTTAGGATGTTCCCTCTCTACTGTTGTAATGTGTGAGCATGTCAGCCTCACCACGAGTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:113323011|113323181 hsa-miR-143-5p 0 0 1
chr13:113323011|113323181 hsa-miR-143-3p 0 0 1
chr13:113323011|113323181 hsa-miR-377-5p 0 0 1
chr13:113323011|113323181 hsa-miR-377-3p 0 0 1
chr13:113323011|113323181 hsa-miR-635 0 0 1
chr13:113323011|113323181 hsa-miR-641 0 0 1
chr13:113323011|113323181 hsa-miR-668-5p 0 0 1
chr13:113323011|113323181 hsa-miR-668-3p 0 0 1
chr13:113323011|113323181 hsa-miR-936 1 1 1
chr13:113323011|113323181 hsa-miR-1178-5p 0 0 1
chr13:113323011|113323181 hsa-miR-1178-3p 0 0 1
chr13:113323011|113323181 hsa-miR-1231 0 0 1
chr13:113323011|113323181 hsa-miR-1825 0 0 1
chr13:113323011|113323181 hsa-miR-145-5p 0 0 1
chr13:113323011|113323181 hsa-miR-485-5p 0 1 1
chr13:113323011|113323181 hsa-miR-199a-5p 0 0 1
chr13:113323011|113323181 hsa-miR-574-5p 0 0 1
chr13:113323011|113323181 hsa-miR-525-5p 0 0 1
chr13:113323011|113323181 hsa-miR-508-5p 0 1 1
chr13:113323011|113323181 hsa-miR-199b-5p 0 0 1
chr13:113323011|113323181 hsa-miR-520a-5p 0 1 1
chr13:113323011|113323181 hsa-miR-342-3p 0 0 1
chr13:113323011|113323181 hsa-miR-323-3p 0 0 1
chr13:113323011|113323181 hsa-miR-516b 0 0 1
chr13:113323011|113323181 hsa-miR-1294 0 1 0
chr13:113323011|113323181 hsa-miR-3125 0 1 0
chr13:113323011|113323181 hsa-miR-3132 1 0 0
chr13:113323011|113323181 hsa-miR-3139 0 1 0
chr13:113323011|113323181 hsa-miR-3929 0 1 0
chr13:113323011|113323181 hsa-miR-4739 1 0 0
chr13:113323011|113323181 hsa-miR-9986 0 1 0
chr13:113323011|113323181 hsa-miR-6734-5p 1 0 0
chr13:113323011|113323181 hsa-miR-5187-5p 0 1 0
chr13:113323011|113323181 hsa-miR-6757-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6873-5p 1 1 0
chr13:113323011|113323181 hsa-miR-3928-3p 0 1 0
chr13:113323011|113323181 hsa-miR-6842-3p 0 1 0
chr13:113323011|113323181 hsa-miR-197-5p 1 0 0
chr13:113323011|113323181 hsa-miR-7108-5p 1 0 0
chr13:113323011|113323181 hsa-miR-7855-5p 0 1 0
chr13:113323011|113323181 hsa-miR-4640-5p 1 0 0
chr13:113323011|113323181 hsa-miR-4756-3p 0 1 0
chr13:113323011|113323181 hsa-miR-4732-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6847-5p 0 1 0
chr13:113323011|113323181 hsa-miR-6832-5p 0 1 0
chr13:113323011|113323181 hsa-miR-6770-3p 0 1 0
chr13:113323011|113323181 hsa-miR-10400-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6756-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6780a-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6797-5p 1 1 0
chr13:113323011|113323181 hsa-miR-4728-5p 1 0 0
chr13:113323011|113323181 hsa-miR-642b-3p 1 0 0
chr13:113323011|113323181 hsa-miR-10392-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6794-5p 1 0 0
chr13:113323011|113323181 hsa-miR-6758-5p 0 1 0
chr13:113323011|113323181 hsa-miR-6750-5p 0 1 0
chr13:113323011|113323181 hsa-miR-6822-5p 0 1 0
chr13:113323011|113323181 hsa-miR-642a-3p 1 0 0
chr13:113323011|113323181 hsa-miR-4799-3p 0 1 0
chr13:113323011|113323181 hsa-miR-323a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr13:113323011|113323181
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MAFKAELKRSRHSSLEFLCLRMFPLYCCNV
Nucleotide Sequence CTGGCCTTTAAAGCTGAACTGAAGCGCTCCAGACACTCATCTCTGGAGTTCCTCTGTCTTAGGATGTTCCCTCTCTACTGTTGTAATGTGTGA

CircID chr13:113323011|113323181
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MERFSSALKARTGHTWLAASFQWRHVLG
Nucleotide Sequence CTGGAGCGCTTCAGTTCAGCTTTAAAGGCCAGGACGGGCCACACGTGGCTGGCGGCCTCGTTCCAGTGGCGGCACGTCCTTGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites