CircNet

General Information

circRNA Basic Information

CircID	chr13:114272292\|114272448
Strand	+
CircType	exon
Host Gene	ENSG00000130177.13;
Algorism	CIRI2;
Sequence	TGGAGTCACGTGCTGTGGTCTGACATAGATGTCTCTAACATCATGTCACTTTCATTCATTTCAATTTCAAAGGTTTCTTCCAAGGAAGGTCTGGAATCTGGAGTTTTCCTTGAGGTTTCCAATGGCGTAAGCCCCGTTTCTTCTGCAGTCTGTTTTT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:114272292\|114272448	hsa-miR-298	1	1	1
chr13:114272292\|114272448	hsa-miR-1303	0	0	1
chr13:114272292\|114272448	hsa-miR-525-5p	0	0	1
chr13:114272292\|114272448	hsa-miR-508-5p	0	0	1
chr13:114272292\|114272448	hsa-miR-502-5p	0	0	1
chr13:114272292\|114272448	hsa-miR-140-3p	0	0	1
chr13:114272292\|114272448	hsa-miR-520a-5p	0	0	1
chr13:114272292\|114272448	hsa-miR-509-3-5p	0	1	1
chr13:114272292\|114272448	hsa-miR-509-5p	0	0	1
chr13:114272292\|114272448	hsa-miR-7	0	0	1
chr13:114272292\|114272448	hsa-miR-203	0	0	1
chr13:114272292\|114272448	hsa-miR-3662	0	1	0
chr13:114272292\|114272448	hsa-miR-3937	1	0	0
chr13:114272292\|114272448	hsa-miR-4494	0	1	0
chr13:114272292\|114272448	hsa-miR-5100	0	1	0
chr13:114272292\|114272448	hsa-miR-1972	1	1	0
chr13:114272292\|114272448	hsa-miR-27a-5p	0	1	0
chr13:114272292\|114272448	hsa-miR-10b-3p	0	1	0
chr13:114272292\|114272448	hsa-miR-6746-5p	1	0	0
chr13:114272292\|114272448	hsa-miR-6760-5p	1	0	0
chr13:114272292\|114272448	hsa-miR-6878-5p	0	1	0
chr13:114272292\|114272448	hsa-miR-616-3p	0	1	0
chr13:114272292\|114272448	hsa-miR-3150b-5p	1	1	0
chr13:114272292\|114272448	hsa-miR-10394-5p	1	0	0
chr13:114272292\|114272448	hsa-miR-7161-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:114272292\|114272448
ORF Type	ORF1
Protein Length	48
Nucleotide Length	144
Protein Sequence	MWSDIDVSNIMSLSFISISKVSSKEGLESGVFLEVSNGVSPVSSAVCF
Nucleotide Sequence	CTGTGGTCTGACATAGATGTCTCTAACATCATGTCACTTTCATTCATTTCAATTTCAAAGGTTTCTTCCAAGGAAGGTCTGGAATCTGGAGTTTTCCTTGAGGTTTCCAATGGCGTAAGCCCCGTTTCTTCTGCAGTCTGTTTT

CircID	chr13:114272292\|114272448
ORF Type	ORF2
Protein Length	33
Nucleotide Length	102
Protein Sequence	MSLTSCHFHSFQFQRFLPRKVWNLEFSLRFPMA
Nucleotide Sequence	ATGTCTCTAACATCATGTCACTTTCATTCATTTCAATTTCAAAGGTTTCTTCCAAGGAAGGTCTGGAATCTGGAGTTTTCCTTGAGGTTTCCAATGGCGTAA

CircID	chr13:114272292\|114272448
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MQKKRGLRHWKPQGKLQIPDLPWKKPLKLK
Nucleotide Sequence	CTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCAAGGAAAACTCCAGATTCCAGACCTTCCTTGGAAGAAACCTTTGAAATTGAAATGA

CircID	chr13:114272292\|114272448
ORF Type	ORF4
Protein Length	38
Nucleotide Length	117
Protein Sequence	METSRKTPDSRPSLEETFEIEMNESDMMLETSMSDHST
Nucleotide Sequence	TTGGAAACCTCAAGGAAAACTCCAGATTCCAGACCTTCCTTGGAAGAAACCTTTGAAATTGAAATGAATGAAAGTGACATGATGTTAGAGACATCTATGTCAGACCACAGCACGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information