CircNet

General Information

circRNA Basic Information

CircID	chr13:20061053\|20064545
Strand	+
CircType	exon
Host Gene	ENSG00000121741.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGCCAGTTCCTGTTTTTCTGCCTGCTCCATTGGACAGCAGTGAGAAGATTCCTGCAGCAATTGAGGAGCTAAAAAGCAAGGTTTCTTCAGATGCTCTTGATACAGAGTTGCTTACAATGACGGATATGATGAGTGAAGACGAGGGGAAAACAGAGACAACCAACATCAACACTGCTGAGGAGCTTGATATGGAAAATGAATTTTTATTACCACCTGTTTTTGGCGAAGAATATGAGGAACAGCCCAGACCTCGATCTAAAAAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:20061053\|20064545	hsa-miR-6081	1	1	1
chr13:20061053\|20064545	hsa-miR-26b-3p	1	1	1
chr13:20061053\|20064545	hsa-miR-6510-5p	1	1	1
chr13:20061053\|20064545	hsa-miR-6499-3p	1	1	1
chr13:20061053\|20064545	hsa-miR-6826-3p	1	1	1
chr13:20061053\|20064545	hsa-miR-6755-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:20061053\|20064545
ORF Type	ORF1
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLVVSVFPSSSLIISVIVSNSVSRASEETLLFSSSIAAGIFSLLSNGAGRKTGTG
Nucleotide Sequence	ATGTTGGTTGTCTCTGTTTTCCCCTCGTCTTCACTCATCATATCCGTCATTGTAAGCAACTCTGTATCAAGAGCATCTGAAGAAACCTTGCTTTTTAGCTCCTCAATTGCTGCAGGAATCTTCTCACTGCTGTCCAATGGAGCAGGCAGAAAAACAGGAACTGGC

CircID	chr13:20061053\|20064545
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MTDMMSEDEGKTETTNINTAEELDMENEFLLPPVFGEEYEEQPRPRSKKK
Nucleotide Sequence	ATGACGGATATGATGAGTGAAGACGAGGGGAAAACAGAGACAACCAACATCAACACTGCTGAGGAGCTTGATATGGAAAATGAATTTTTATTACCACCTGTTTTTGGCGAAGAATATGAGGAACAGCCCAGACCTCGATCTAAAAAAAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:20061053\|20064545	NOP56	0	1	0
chr13:20061053\|20064545	ELAVL1	0	5	1
chr13:20061053\|20064545	DHX9	1	0	0
chr13:20061053\|20064545	SF3B4	0	1	0
chr13:20061053\|20064545	CELF2	2	0	0
chr13:20061053\|20064545	PRPF8	0	0	2
chr13:20061053\|20064545	TNRC6A	1	0	0
chr13:20061053\|20064545	FMR1	0	2	8
chr13:20061053\|20064545	NUDT21	0	1	0
chr13:20061053\|20064545	FUS	1	0	0
chr13:20061053\|20064545	SRSF1	0	0	3
chr13:20061053\|20064545	NOP58	0	5	4
chr13:20061053\|20064545	U2AF2	9	8	3
chr13:20061053\|20064545	DDX54	0	2	10
chr13:20061053\|20064545	RBM10	3	0	0
chr13:20061053\|20064545	HNRNPC	0	1	0
chr13:20061053\|20064545	TRA2A	0	0	1
chr13:20061053\|20064545	ZNF184	0	0	2
chr13:20061053\|20064545	HNRNPA1	0	1	0
chr13:20061053\|20064545	ZC3H7B	0	0	1
chr13:20061053\|20064545	ACIN1	0	0	1
chr13:20061053\|20064545	LIN28B	0	0	2
chr13:20061053\|20064545	LIN28A	0	0	1
chr13:20061053\|20064545	RANGAP1	0	0	3
chr13:20061053\|20064545	FXR1	2	0	3
chr13:20061053\|20064545	FXR2	0	0	5
chr13:20061053\|20064545	IGF2BP3	1	0	1
chr13:20061053\|20064545	IGF2BP2	1	2	5
chr13:20061053\|20064545	TAF15	1	1	0
chr13:20061053\|20064545	BUD13	0	0	4
chr13:20061053\|20064545	RBM47	0	0	2
chr13:20061053\|20064545	SLTM	0	0	1
chr13:20061053\|20064545	CSTF2T	0	1	2
chr13:20061053\|20064545	RBM22	0	1	0
chr13:20061053\|20064545	TIAL1	0	1	0
chr13:20061053\|20064545	AIFM1	0	0	1
chr13:20061053\|20064545	EIF4A3	0	3	3
chr13:20061053\|20064545	FBL	1	4	3

CircRNA Information