CircRNA Information

General Information
circRNA Basic Information
CircID chr13:21147809|21147971
Strand +
CircType exon
Host Gene ENSG00000150459.11;
Algorism CIRI2;
Sequence CCTTGTTTCCTCTGAACTGGTTCCAGCCTTTAAAATGCCCTATTCCCCACATGTTAAAAACTTAAGTGCTCATTGTGTTGCCTGTTCTTTAACCTTTTATGTCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:21147809|21147971 hsa-miR-186-5p 0 0 1
chr13:21147809|21147971 hsa-miR-186-3p 0 0 1
chr13:21147809|21147971 hsa-miR-383-5p 0 0 1
chr13:21147809|21147971 hsa-miR-383-3p 0 0 1
chr13:21147809|21147971 hsa-miR-491-5p 1 0 1
chr13:21147809|21147971 hsa-miR-299-3p 0 0 1
chr13:21147809|21147971 hsa-miR-768-3p 0 0 1
chr13:21147809|21147971 hsa-miR-1826 0 0 1
chr13:21147809|21147971 hsa-miR-762 1 0 0
chr13:21147809|21147971 hsa-miR-1275 1 0 0
chr13:21147809|21147971 hsa-miR-2110 1 0 0
chr13:21147809|21147971 hsa-miR-3125 1 0 0
chr13:21147809|21147971 hsa-miR-4271 1 0 0
chr13:21147809|21147971 hsa-miR-3652 1 0 0
chr13:21147809|21147971 hsa-miR-3945 1 0 0
chr13:21147809|21147971 hsa-miR-4430 1 0 0
chr13:21147809|21147971 hsa-miR-3135b 1 1 0
chr13:21147809|21147971 hsa-miR-4505 1 0 0
chr13:21147809|21147971 hsa-miR-4525 1 0 0
chr13:21147809|21147971 hsa-miR-4706 1 0 0
chr13:21147809|21147971 hsa-miR-5698 1 0 0
chr13:21147809|21147971 hsa-miR-5787 1 0 0
chr13:21147809|21147971 hsa-miR-10226 1 0 0
chr13:21147809|21147971 hsa-miR-12128 1 0 0
chr13:21147809|21147971 hsa-miR-92a-2-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6734-5p 1 0 0
chr13:21147809|21147971 hsa-miR-3150a-3p 1 0 0
chr13:21147809|21147971 hsa-miR-7106-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6857-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6820-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6727-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6759-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6742-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6716-5p 1 0 0
chr13:21147809|21147971 hsa-miR-3151-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6772-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6796-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6782-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6810-5p 1 0 0
chr13:21147809|21147971 hsa-miR-4690-5p 1 0 0
chr13:21147809|21147971 hsa-miR-3162-5p 1 0 0
chr13:21147809|21147971 hsa-miR-5010-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6866-5p 1 1 0
chr13:21147809|21147971 hsa-miR-4773 0 1 0
chr13:21147809|21147971 hsa-miR-503-3p 1 0 0
chr13:21147809|21147971 hsa-miR-302c-5p 0 1 0
chr13:21147809|21147971 hsa-miR-6505-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6870-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6775-5p 1 0 0
chr13:21147809|21147971 hsa-miR-5001-5p 1 1 0
chr13:21147809|21147971 hsa-miR-6756-5p 1 0 0
chr13:21147809|21147971 hsa-miR-10401-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6763-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6879-5p 1 0 0
chr13:21147809|21147971 hsa-miR-5196-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6780b-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6862-5p 1 0 0
chr13:21147809|21147971 hsa-miR-4701-3p 1 0 0
chr13:21147809|21147971 hsa-miR-4725-3p 1 0 0
chr13:21147809|21147971 hsa-miR-4745-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6735-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6777-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6889-5p 1 0 0
chr13:21147809|21147971 hsa-miR-3085-5p 1 0 0
chr13:21147809|21147971 hsa-miR-6773-5p 1 0 0
chr13:21147809|21147971 hsa-miR-7843-5p 1 0 0
chr13:21147809|21147971 hsa-miR-4665-5p 1 0 0
chr13:21147809|21147971 hsa-miR-7151-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr13:21147809|21147971
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MCCLFFNLLCHGTLIKAGQSRPTQLLQLAA
Nucleotide Sequence TTGTGTTGCCTGTTCTTTAACCTTTTATGTCATGGTACCCTGATCAAGGCGGGGCAATCTCGTCCAACACAGCTTCTTCAACTTGCCGCA
CircID chr13:21147809|21147971
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MVPAFKMPYSPHVKNLSAHCVACSLTFYVMVP
Nucleotide Sequence CTGGTTCCAGCCTTTAAAATGCCCTATTCCCCACATGTTAAAAACTTAAGTGCTCATTGTGTTGCCTGTTCTTTAACCTTTTATGTCATGGTACCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab