CircRNA Information

General Information
circRNA Basic Information
CircID chr13:24223694|24223888
Strand -
CircType exon
Host Gene ENSG00000273167.1;
Algorism CIRI2;
Sequence GGACAATCTTGCCTTTCTGAAGAAGAGCTCCTTTAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:24223694|24223888 hsa-miR-31-5p 0 0 1
chr13:24223694|24223888 hsa-miR-31-3p 0 0 1
chr13:24223694|24223888 hsa-miR-99a-5p 0 0 1
chr13:24223694|24223888 hsa-miR-99a-3p 0 0 1
chr13:24223694|24223888 hsa-miR-100-5p 0 0 1
chr13:24223694|24223888 hsa-miR-100-3p 0 0 1
chr13:24223694|24223888 hsa-miR-99b-5p 0 0 1
chr13:24223694|24223888 hsa-miR-99b-3p 0 0 1
chr13:24223694|24223888 hsa-miR-328-5p 0 0 1
chr13:24223694|24223888 hsa-miR-328-3p 0 0 1
chr13:24223694|24223888 hsa-miR-133b 0 1 1
chr13:24223694|24223888 hsa-miR-520g-5p 0 0 1
chr13:24223694|24223888 hsa-miR-520g-3p 0 0 1
chr13:24223694|24223888 hsa-miR-520h 0 0 1
chr13:24223694|24223888 hsa-miR-572 0 0 1
chr13:24223694|24223888 hsa-miR-617 0 1 1
chr13:24223694|24223888 hsa-miR-766-5p 0 0 1
chr13:24223694|24223888 hsa-miR-766-3p 0 0 1
chr13:24223694|24223888 hsa-miR-765 0 0 1
chr13:24223694|24223888 hsa-miR-708-5p 0 0 1
chr13:24223694|24223888 hsa-miR-708-3p 0 0 1
chr13:24223694|24223888 hsa-miR-938 0 0 1
chr13:24223694|24223888 hsa-miR-1200 0 0 1
chr13:24223694|24223888 hsa-miR-1291 0 0 1
chr13:24223694|24223888 hsa-miR-1263 0 1 1
chr13:24223694|24223888 hsa-miR-1266-5p 0 0 1
chr13:24223694|24223888 hsa-miR-1266-3p 0 0 1
chr13:24223694|24223888 hsa-miR-28-5p 0 0 1
chr13:24223694|24223888 hsa-miR-767-3p 0 0 1
chr13:24223694|24223888 hsa-miR-1308 0 0 1
chr13:24223694|24223888 hsa-miR-768-5p 0 0 1
chr13:24223694|24223888 hsa-miR-133a 0 0 1
chr13:24223694|24223888 hsa-miR-219-5p 0 0 1
chr13:24223694|24223888 hsa-miR-544b 1 1 0
chr13:24223694|24223888 hsa-miR-4449 1 0 0
chr13:24223694|24223888 hsa-miR-4488 1 0 0
chr13:24223694|24223888 hsa-miR-4518 0 1 0
chr13:24223694|24223888 hsa-miR-4527 0 1 0
chr13:24223694|24223888 hsa-miR-4741 1 1 0
chr13:24223694|24223888 hsa-miR-12119 1 0 0
chr13:24223694|24223888 hsa-miR-22-5p 0 1 0
chr13:24223694|24223888 hsa-miR-6749-3p 1 0 0
chr13:24223694|24223888 hsa-miR-4433a-3p 1 0 0
chr13:24223694|24223888 hsa-miR-212-5p 0 1 0
chr13:24223694|24223888 hsa-miR-7160-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6875-3p 0 1 0
chr13:24223694|24223888 hsa-miR-3928-3p 0 1 0
chr13:24223694|24223888 hsa-miR-3180-3p 1 0 0
chr13:24223694|24223888 hsa-miR-3934-3p 0 1 0
chr13:24223694|24223888 hsa-miR-1343-3p 1 0 0
chr13:24223694|24223888 hsa-miR-6852-5p 1 0 0
chr13:24223694|24223888 hsa-miR-3944-3p 0 1 0
chr13:24223694|24223888 hsa-miR-378a-5p 0 1 0
chr13:24223694|24223888 hsa-miR-2276-3p 0 1 0
chr13:24223694|24223888 hsa-miR-6781-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6877-5p 1 0 0
chr13:24223694|24223888 hsa-miR-3189-3p 1 0 0
chr13:24223694|24223888 hsa-miR-208a-5p 0 1 0
chr13:24223694|24223888 hsa-miR-3140-3p 0 1 0
chr13:24223694|24223888 hsa-miR-6851-3p 0 1 0
chr13:24223694|24223888 hsa-miR-431-3p 1 0 0
chr13:24223694|24223888 hsa-miR-133a-3p 0 1 0
chr13:24223694|24223888 hsa-miR-5001-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6752-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6803-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6819-5p 1 0 0
chr13:24223694|24223888 hsa-miR-6851-5p 1 1 0
chr13:24223694|24223888 hsa-miR-6852-3p 0 1 0
chr13:24223694|24223888 hsa-miR-3620-5p 1 0 0
chr13:24223694|24223888 hsa-miR-3689d 0 1 0
chr13:24223694|24223888 hsa-miR-6791-5p 1 0 0
chr13:24223694|24223888 hsa-miR-4659a-3p 0 1 0
chr13:24223694|24223888 hsa-miR-6507-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr13:24223694|24223888
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSPIRAKDFDR
Nucleotide Sequence CTGAAGAAGAGCTCCTTTAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGA

CircID chr13:24223694|24223888
ORF Type ORF2
Protein Length 64
Nucleotide Length 192
Protein Sequence MSKSLALIGLLQRLVLPDPSFWESVEELLRVLCGTRASWAVLRSARLEVDFRLKELFFRKARLS
Nucleotide Sequence CTGTCAAAGTCCTTGGCCCTTATCGGGCTCCTCCAGCGTTTGGTCCTTCCTGACCCAAGCTTTTGGGAGTCAGTGGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATGGGCCGTCCTGAGGTCTGCAAGATTGGAGGTGGACTTCCGCTTAAAGGAGCTCTTCTTCAGAAAGGCAAGATTGTCC

CircID chr13:24223694|24223888
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MTQAFGSQWRNCSGSSVVPVRHGPS
Nucleotide Sequence CTGACCCAAGCTTTTGGGAGTCAGTGGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATGGGCCGTCCTGA

CircID chr13:24223694|24223888
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MGVSGGTAQGPLWYPCVMGRPEVCKIGGGLPLKGALLQKGKIV
Nucleotide Sequence TTGGGAGTCAGTGGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATGGGCCGTCCTGAGGTCTGCAAGATTGGAGGTGGACTTCCGCTTAAAGGAGCTCTTCTTCAGAAAGGCAAGATTGTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites