CircNet

General Information

circRNA Basic Information

CircID	chr13:27066275\|27066478
Strand	+
CircType	exon
Host Gene	ENSG00000152484.12;
Algorism	CIRI2;
Sequence	CTCATTTTCATAACATAACTACTCTTGATACTTTCTTTAAAAACACTTTTTATTAAAGATTCTATCATGAGGTATTTGGCTGGGAGCTGGGAGGCTAAAGCGCTCATGTCCTGGCTCTTCAGTGAATTTAACTGTGTGACCTTGGGCAAGTCACTTAACCTCTCTGTGCTTCAGTCTCCCTGTCTTGTAAAATGGGAGTAATAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:27066275\|27066478	hsa-miR-186-5p	0	0	1
chr13:27066275\|27066478	hsa-miR-186-3p	0	0	1
chr13:27066275\|27066478	hsa-miR-377-5p	0	0	1
chr13:27066275\|27066478	hsa-miR-377-3p	0	0	1
chr13:27066275\|27066478	hsa-miR-335-5p	0	0	1
chr13:27066275\|27066478	hsa-miR-335-3p	0	0	1
chr13:27066275\|27066478	hsa-miR-433-5p	0	0	1
chr13:27066275\|27066478	hsa-miR-433-3p	0	0	1
chr13:27066275\|27066478	hsa-miR-548l	0	0	1
chr13:27066275\|27066478	hsa-miR-339-3p	0	0	1
chr13:27066275\|27066478	hsa-miR-875-5p	0	0	1
chr13:27066275\|27066478	hsa-miR-1244	0	1	1
chr13:27066275\|27066478	hsa-miR-4270	0	1	0
chr13:27066275\|27066478	hsa-miR-7977	0	1	0
chr13:27066275\|27066478	hsa-miR-12127	0	1	0
chr13:27066275\|27066478	hsa-miR-12128	0	1	0
chr13:27066275\|27066478	hsa-miR-4761-3p	0	1	0
chr13:27066275\|27066478	hsa-miR-6760-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-4684-3p	1	0	0
chr13:27066275\|27066478	hsa-miR-6778-3p	0	1	0
chr13:27066275\|27066478	hsa-miR-6882-5p	1	1	0
chr13:27066275\|27066478	hsa-miR-4777-3p	0	1	0
chr13:27066275\|27066478	hsa-miR-1207-5p	1	1	0
chr13:27066275\|27066478	hsa-miR-4763-3p	1	0	0
chr13:27066275\|27066478	hsa-miR-6754-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-6808-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-6889-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-6758-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-6856-5p	0	1	0
chr13:27066275\|27066478	hsa-miR-4716-3p	0	1	0
chr13:27066275\|27066478	hsa-miR-6820-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:27066275\|27066478
ORF Type	ORF1
Protein Length	58
Nucleotide Length	177
Protein Sequence	MILSLKTLFIKDSIMRYLAGSWEAKALMSWLFSEFNCVTLGKSLNLSVLQSPCLVKWE
Nucleotide Sequence	TTGATACTTTCTTTAAAAACACTTTTTATTAAAGATTCTATCATGAGGTATTTGGCTGGGAGCTGGGAGGCTAAAGCGCTCATGTCCTGGCTCTTCAGTGAATTTAACTGTGTGACCTTGGGCAAGTCACTTAACCTCTCTGTGCTTCAGTCTCCCTGTCTTGTAAAATGGGAGTAA

CircID	chr13:27066275\|27066478
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MPKVTQLNSLKSQDMSALASQLPAKYLMIESLIKSVFKESIKSSYVMKM
Nucleotide Sequence	TTGCCCAAGGTCACACAGTTAAATTCACTGAAGAGCCAGGACATGAGCGCTTTAGCCTCCCAGCTCCCAGCCAAATACCTCATGATAGAATCTTTAATAAAAAGTGTTTTTAAAGAAAGTATCAAGAGTAGTTATGTTATGAAAATG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information