CircNet

General Information

circRNA Basic Information

CircID	chr13:31138781\|31140309
Strand	-
CircType	exon
Host Gene	ENSG00000120694.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGTAAGATGATAATGCAAGATAAATTGGAAAAAGAAAGGAATGATGCTAAAAATGCAGTTGAGGAATATGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATATGAAAAATTTATATGTGAGCAGAAAATTGGCACTCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACGGCCAAAAATGTTTGAAGAACTAGGACAGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACTTCAGAAATAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:31138781\|31140309	hsa-miR-1322	1	1	1
chr13:31138781\|31140309	hsa-miR-3138	1	1	1
chr13:31138781\|31140309	hsa-miR-3185	1	1	1
chr13:31138781\|31140309	hsa-miR-3911	1	1	1
chr13:31138781\|31140309	hsa-miR-6124	1	1	1
chr13:31138781\|31140309	hsa-miR-671-5p	1	1	1
chr13:31138781\|31140309	hsa-miR-3926	1	1	1
chr13:31138781\|31140309	hsa-miR-1301-3p	1	1	1
chr13:31138781\|31140309	hsa-miR-223-5p	1	1	1
chr13:31138781\|31140309	hsa-miR-4800-5p	1	1	1
chr13:31138781\|31140309	hsa-miR-6818-5p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:31138781\|31140309
ORF Type	ORF1
Protein Length	80
Nucleotide Length	240
Protein Sequence	MIMQDKLEKERNDAKNAVEEYVYEFRDKLCGPYEKFICEQKIGTPVKVRFQEAEERPKMFEELGQRLQHYAKIAADFRNK
Nucleotide Sequence	ATGATAATGCAAGATAAATTGGAAAAAGAAAGGAATGATGCTAAAAATGCAGTTGAGGAATATGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATATGAAAAATTTATATGTGAGCAGAAAATTGGCACTCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACGGCCAAAAATGTTTGAAGAACTAGGACAGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACTTCAGAAATAAG

CircID	chr13:31138781\|31140309
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	MMLKMQLRNMCMSSETSCVDHMKNLYVSRKLALQLKFGFRKLKNGQKCLKN*
Nucleotide Sequence	ATGATGCTAAAAATGCAGTTGAGGAATATGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATATGAAAAATTTATATGTGAGCAGAAAATTGGCACTCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACGGCCAAAAATGTTTGAAGAACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:31138781\|31140309	MOV10	1	0	0
chr13:31138781\|31140309	ELAVL1	2	2	2
chr13:31138781\|31140309	SF3B4	1	0	0
chr13:31138781\|31140309	FAM120A	2	0	2
chr13:31138781\|31140309	KHDRBS1	3	2	2
chr13:31138781\|31140309	FKBP4	0	0	1
chr13:31138781\|31140309	PRPF8	0	3	0
chr13:31138781\|31140309	UPF1	5	0	0
chr13:31138781\|31140309	TAF15	2	4	0
chr13:31138781\|31140309	FMR1	1	3	4
chr13:31138781\|31140309	CPSF6	0	0	2
chr13:31138781\|31140309	SAFB2	0	1	2
chr13:31138781\|31140309	CNBP	0	1	0
chr13:31138781\|31140309	TROVE2	0	1	0
chr13:31138781\|31140309	FUS	2	2	0
chr13:31138781\|31140309	GNL3	3	0	1
chr13:31138781\|31140309	DGCR8	1	2	3
chr13:31138781\|31140309	SRSF1	1	3	3
chr13:31138781\|31140309	NOP58	2	5	3
chr13:31138781\|31140309	SRSF3	0	1	0
chr13:31138781\|31140309	U2AF1	1	0	0
chr13:31138781\|31140309	TNRC6A	0	2	0
chr13:31138781\|31140309	U2AF2	14	3	0
chr13:31138781\|31140309	SRSF9	0	0	1
chr13:31138781\|31140309	DDX54	5	4	9
chr13:31138781\|31140309	RBM10	1	4	0
chr13:31138781\|31140309	HNRNPA2B1	0	1	0
chr13:31138781\|31140309	SF3A3	1	0	0
chr13:31138781\|31140309	YWHAG	0	0	1
chr13:31138781\|31140309	ZNF184	1	4	2
chr13:31138781\|31140309	HNRNPA1	2	0	0
chr13:31138781\|31140309	MSI2	0	2	0
chr13:31138781\|31140309	ACIN1	1	1	2
chr13:31138781\|31140309	LIN28B	1	0	3
chr13:31138781\|31140309	LIN28A	0	1	0
chr13:31138781\|31140309	RANGAP1	0	1	0
chr13:31138781\|31140309	FXR1	0	2	1
chr13:31138781\|31140309	FXR2	0	0	2
chr13:31138781\|31140309	SND1	0	0	2
chr13:31138781\|31140309	IGF2BP1	3	2	1
chr13:31138781\|31140309	IGF2BP3	0	1	0
chr13:31138781\|31140309	IGF2BP2	3	9	7
chr13:31138781\|31140309	HNRNPUL1	1	1	0
chr13:31138781\|31140309	TARDBP	0	2	0
chr13:31138781\|31140309	BUD13	0	0	1
chr13:31138781\|31140309	RBFOX2	0	0	1
chr13:31138781\|31140309	RBM47	1	1	2
chr13:31138781\|31140309	SLTM	0	0	1
chr13:31138781\|31140309	EIF4G2	0	1	1
chr13:31138781\|31140309	DDX42	1	0	0
chr13:31138781\|31140309	CSTF2T	2	1	1
chr13:31138781\|31140309	TRA2A	0	0	1
chr13:31138781\|31140309	RBM27	0	1	0
chr13:31138781\|31140309	RBM22	1	1	0
chr13:31138781\|31140309	FBL	0	2	3
chr13:31138781\|31140309	AGO1	1	0	0
chr13:31138781\|31140309	EIF4A3	4	4	4
chr13:31138781\|31140309	AGO2	2	6	4

CircRNA Information