CircRNA Information

General Information
circRNA Basic Information
CircID chr13:35048563|35232619
Strand +
CircType exon
Host Gene ENSG00000172915.18;
Algorism find_circ;CIRI2;CIRC
Sequence GCAATTGCCTTGCCTCCTATTGCAAAGTGGCCTTATCAGAATGGCTTCACCTTAAACACTTGGTTTCGTATGGATCCATTAAATAATATTAATGTTGATAAGGATAAACCTTATCTTTATTGTTTTCGTACTAGCAAAGGAGTTGGTTACTCTGCTCATTTTGTTGGCAACTGTTTAATAGTCACATCATTGAAGTCCAAAGGAAAAGGTTTTCAGCATTGTGTGAAATATGATTTTCAACCACGCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr13:35048563|35232619 ELAVL1 3 3 0
chr13:35048563|35232619 FBL 0 1 0
chr13:35048563|35232619 BUD13 1 0 0
chr13:35048563|35232619 NOP58 0 2 1
chr13:35048563|35232619 SF3B4 1 0 0
chr13:35048563|35232619 HNRNPA1 0 1 0
chr13:35048563|35232619 U2AF2 0 0 1
chr13:35048563|35232619 CSTF2T 0 0 1
chr13:35048563|35232619 NOP56 0 1 0
chr13:35048563|35232619 DDX54 0 0 5
chr13:35048563|35232619 FUS 1 1 0
chr13:35048563|35232619 TARDBP 1 0 0
chr13:35048563|35232619 RBM10 2 2 0
chr13:35048563|35232619 TIAL1 0 1 0
chr13:35048563|35232619 TAF15 1 1 0
chr13:35048563|35232619 MOV10 0 2 0
chr13:35048563|35232619 IGF2BP2 2 1 0
chr13:35048563|35232619 HNRNPD 1 0 0
chr13:35048563|35232619 EIF4A3 1 4 3
chr13:35048563|35232619 AGO2 2 0 2