CircNet

General Information

circRNA Basic Information

CircID	chr13:37024035\|37026236
Strand	-
CircType	exon
Host Gene	ENSG00000102710.19;
Algorism	CIRI2;find_circ;DCC;
Sequence	GTTCATTATTGGATCAAAGACCGATGCTGAGAGGGTAGTCAATCAGTACCAAGAATTAGTCCAGAATGAAGCCAAATGTCCGGTCAAGATGTCACACAGCTCCAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGATCAAACTGAAACCGTGTCAGTTCAGTCTTCGGTATTGGGGAAGGGTGTAAAACATCGACCCCCACCAATCAAACTTCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTATTTTACACCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAAATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:37024035\|37026236	hsa-miR-198	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:37024035\|37026236
ORF Type	ORF1
Protein Length	108
Nucleotide Length	324
Protein Sequence	MSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQ
Nucleotide Sequence	ATGTCACACAGCTCCAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGATCAAACTGAAACCGTGTCAGTTCAGTCTTCGGTATTGGGGAAGGGTGTAAAACATCGACCCCCACCAATCAAACTTCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTATTTTACACCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAAATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAA

CircID	chr13:37024035\|37026236
ORF Type	ORF2
Protein Length	71
Nucleotide Length	213
Protein Sequence	NIDPHQSNFPQAQEIVPQVTILHHNRQAAFSNLQLLLLLLSHQVFLGNHLWISIKLACFLQLPYHLPAHHK
Nucleotide Sequence	AACATCGACCCCCACCAATCAAACTTCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTATTTTACACCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAAATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:37024035\|37026236	U2AF2	20	37	11
chr13:37024035\|37026236	MOV10	0	2	0
chr13:37024035\|37026236	ELAVL1	11	7	1
chr13:37024035\|37026236	NUMA1	0	1	0
chr13:37024035\|37026236	TIAL1	0	2	0
chr13:37024035\|37026236	SF3B4	0	2	0
chr13:37024035\|37026236	FAM120A	0	0	2
chr13:37024035\|37026236	KHDRBS1	0	1	0
chr13:37024035\|37026236	CELF2	0	4	0
chr13:37024035\|37026236	PRPF8	2	8	0
chr13:37024035\|37026236	UPF1	0	3	0
chr13:37024035\|37026236	TAF15	1	1	1
chr13:37024035\|37026236	FMR1	0	0	4
chr13:37024035\|37026236	CPSF6	0	2	0
chr13:37024035\|37026236	TROVE2	0	1	1
chr13:37024035\|37026236	FUS	1	3	0
chr13:37024035\|37026236	SRSF7	0	0	3
chr13:37024035\|37026236	RNF219	0	1	0
chr13:37024035\|37026236	SRSF1	3	7	6
chr13:37024035\|37026236	NOP58	2	5	3
chr13:37024035\|37026236	SRSF3	0	1	0
chr13:37024035\|37026236	U2AF1	3	2	1
chr13:37024035\|37026236	TNRC6A	0	1	0
chr13:37024035\|37026236	NOP56	2	3	1
chr13:37024035\|37026236	SRSF9	0	0	1
chr13:37024035\|37026236	HNRNPU	0	0	2
chr13:37024035\|37026236	DDX54	0	1	7
chr13:37024035\|37026236	RBM10	1	4	0
chr13:37024035\|37026236	PCBP2	0	0	1
chr13:37024035\|37026236	HNRNPA2B1	1	1	6
chr13:37024035\|37026236	SF3A3	0	1	0
chr13:37024035\|37026236	HNRNPL	0	1	0
chr13:37024035\|37026236	PTBP1	0	1	0
chr13:37024035\|37026236	HNRNPC	0	10	0
chr13:37024035\|37026236	TRA2A	0	0	1
chr13:37024035\|37026236	ZNF184	0	2	3
chr13:37024035\|37026236	ACIN1	1	0	3
chr13:37024035\|37026236	ZC3H7B	0	0	1
chr13:37024035\|37026236	KHSRP	0	3	0
chr13:37024035\|37026236	MSI2	0	1	0
chr13:37024035\|37026236	HNRNPA1	3	6	2
chr13:37024035\|37026236	LIN28B	0	1	1
chr13:37024035\|37026236	FXR1	0	0	2
chr13:37024035\|37026236	BCCIP	0	0	1
chr13:37024035\|37026236	SND1	0	1	2
chr13:37024035\|37026236	IGF2BP1	1	4	15
chr13:37024035\|37026236	IGF2BP3	1	4	8
chr13:37024035\|37026236	IGF2BP2	8	15	14
chr13:37024035\|37026236	FTO	0	2	0
chr13:37024035\|37026236	TARDBP	0	5	0
chr13:37024035\|37026236	YTHDC1	0	2	1
chr13:37024035\|37026236	BUD13	1	1	5
chr13:37024035\|37026236	RBFOX2	3	1	0
chr13:37024035\|37026236	RBM47	0	0	1
chr13:37024035\|37026236	SLTM	0	0	1
chr13:37024035\|37026236	DDX42	0	0	1
chr13:37024035\|37026236	FXR2	0	0	1
chr13:37024035\|37026236	TIA1	0	2	0
chr13:37024035\|37026236	RBM22	0	2	0
chr13:37024035\|37026236	ILF3	0	1	1
chr13:37024035\|37026236	XRN2	1	0	1
chr13:37024035\|37026236	DKC1	0	1	0
chr13:37024035\|37026236	AGO2	0	2	0
chr13:37024035\|37026236	EIF4A3	4	3	8
chr13:37024035\|37026236	FBL	1	4	4

CircRNA Information