CircNet

General Information

circRNA Basic Information

CircID	chr13:42189036\|42206146
Strand	+
CircType	exon
Host Gene	ENSG00000102780.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGCCGAACTAAAAACTTGATGTGGTATGGAGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATTCCCAGCTATGCTGGAGGCACTAACTTTTGGGGTGGAACTAAAGAGGATGAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:42189036\|42206146
ORF Type	ORF1
Protein Length	62
Nucleotide Length	186
Protein Sequence	MWYGVLGTRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDD
Nucleotide Sequence	ATGTGGTATGGAGTCCTTGGAACCCGGGAGTTATTACAGAGATCGTACAAGAATTTAGAACAAAGGGTTCAACTTGAGTGTGATGGGCAGTATATTCCTCTTCCCAGCTTGCAAGGCATAGCCGTGTTGAACATTCCCAGCTATGCTGGAGGCACTAACTTTTGGGGTGGAACTAAAGAGGATGAT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:42189036\|42206146	U2AF2	8	0	2
chr13:42189036\|42206146	NOP58	0	2	1
chr13:42189036\|42206146	SRSF3	0	1	0
chr13:42189036\|42206146	U2AF1	0	0	1
chr13:42189036\|42206146	MSI1	0	1	0
chr13:42189036\|42206146	NOP56	1	0	0
chr13:42189036\|42206146	DDX54	0	0	3
chr13:42189036\|42206146	RBFOX2	2	0	0
chr13:42189036\|42206146	PTBP1	2	0	0
chr13:42189036\|42206146	IGF2BP2	0	1	0
chr13:42189036\|42206146	EIF4A3	1	0	4
chr13:42189036\|42206146	FUS	1	0	0

CircRNA Information