CircNet

General Information

circRNA Basic Information

CircID	chr13:45404327\|45409074
Strand	-
CircType	exon
Host Gene	ENSG00000174032.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTACATTTCCAATTGATTTAACCAAGACACGGCTCCAGATTCAAGGCCAGACGAATGATGCAAAATTTAAGGAAATTAGATACCGAGGAATGTTGCACGCATTAGTGAGGATAGGCAGAGAAGAAGGGCTGAAAGCACTCTACTCGGGATGAAACTCTACCGATAAATGTGATATGTGGAATTCTGTCTGGAGTCATATCTTCAACCATTGCTAATCCAACTGATGTTTTGAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:45404327\|45409074	hsa-miR-10b-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:45404327\|45409074
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MVEDMTPDRIPHITFIGRVSSRVECFQPFFSAYPH*
Nucleotide Sequence	ATGGTTGAAGATATGACTCCAGACAGAATTCCACATATCACATTTATCGGTAGAGTTTCATCCCGAGTAGAGTGCTTTCAGCCCTTCTTCTCTGCCTATCCTCACTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:45404327\|45409074	KHSRP	0	1	0
chr13:45404327\|45409074	FUS	3	2	0
chr13:45404327\|45409074	PRPF8	0	4	4
chr13:45404327\|45409074	CPSF7	1	1	0
chr13:45404327\|45409074	CPSF6	1	0	0
chr13:45404327\|45409074	ELAVL1	9	3	1
chr13:45404327\|45409074	SRSF1	0	1	2
chr13:45404327\|45409074	NOP58	0	0	1
chr13:45404327\|45409074	U2AF2	4	6	0
chr13:45404327\|45409074	SRSF9	0	0	1
chr13:45404327\|45409074	HNRNPU	0	1	0
chr13:45404327\|45409074	DDX54	0	0	3
chr13:45404327\|45409074	FIP1L1	0	1	0
chr13:45404327\|45409074	PTBP1	6	0	0
chr13:45404327\|45409074	HNRNPC	9	35	3
chr13:45404327\|45409074	TRA2A	0	0	1
chr13:45404327\|45409074	ZNF184	0	0	1
chr13:45404327\|45409074	ZC3H7B	4	0	0
chr13:45404327\|45409074	MSI2	0	0	1
chr13:45404327\|45409074	HNRNPA1	2	9	1
chr13:45404327\|45409074	LIN28B	1	3	3
chr13:45404327\|45409074	SND1	0	1	0
chr13:45404327\|45409074	IGF2BP1	0	0	2
chr13:45404327\|45409074	IGF2BP2	0	0	1
chr13:45404327\|45409074	HNRNPUL1	1	0	0
chr13:45404327\|45409074	TARDBP	5	1	2
chr13:45404327\|45409074	BUD13	0	1	1
chr13:45404327\|45409074	CSTF2T	1	1	0
chr13:45404327\|45409074	WDR33	1	0	0
chr13:45404327\|45409074	AGO2	0	1	0
chr13:45404327\|45409074	EWSR1	3	1	0
chr13:45404327\|45409074	EIF4A3	1	1	2
chr13:45404327\|45409074	FBL	1	0	0

CircRNA Information