CircNet

General Information

circRNA Basic Information

CircID	chr13:48233343\|48233477
Strand	+
CircType	exon
Host Gene	ENSG00000136156.11;
Algorism	CIRI2;
Sequence	CTTGCAGTCCACCGCGACGGCGTCGGGGGGGATGATGAGCGCCTCCTCGCCGCTCTTGGGCTCGTCCTTCTTGGCCTCCTTCTGGGCCAGAGCGGAGTTGAACGTCACCTTCACCATGGCGCGGCCTGGGGCGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:48233343\|48233477	hsa-miR-335-5p	0	0	1
chr13:48233343\|48233477	hsa-miR-335-3p	0	0	1
chr13:48233343\|48233477	hsa-miR-493-5p	0	0	1
chr13:48233343\|48233477	hsa-miR-493-3p	0	0	1
chr13:48233343\|48233477	hsa-miR-572	0	0	1
chr13:48233343\|48233477	hsa-miR-1288-5p	0	0	1
chr13:48233343\|48233477	hsa-miR-1288-3p	0	0	1
chr13:48233343\|48233477	hsa-miR-151-5p	0	0	1
chr13:48233343\|48233477	hsa-miR-1269	0	0	1
chr13:48233343\|48233477	hsa-miR-3960	0	1	0
chr13:48233343\|48233477	hsa-miR-4706	1	0	0
chr13:48233343\|48233477	hsa-miR-4739	1	1	0
chr13:48233343\|48233477	hsa-miR-8072	1	1	0
chr13:48233343\|48233477	hsa-miR-8071	0	1	0
chr13:48233343\|48233477	hsa-miR-6089	1	1	0
chr13:48233343\|48233477	hsa-miR-7847-3p	1	0	0
chr13:48233343\|48233477	hsa-miR-4695-5p	1	1	0
chr13:48233343\|48233477	hsa-miR-6781-5p	1	0	0
chr13:48233343\|48233477	hsa-miR-4707-5p	1	0	0
chr13:48233343\|48233477	hsa-miR-6729-3p	0	1	0
chr13:48233343\|48233477	hsa-miR-6789-3p	0	1	0
chr13:48233343\|48233477	hsa-miR-328-5p	1	0	0
chr13:48233343\|48233477	hsa-miR-4649-5p	1	1	0
chr13:48233343\|48233477	hsa-miR-4726-5p	1	0	0
chr13:48233343\|48233477	hsa-miR-4697-5p	1	0	0
chr13:48233343\|48233477	hsa-miR-3173-3p	0	1	0
chr13:48233343\|48233477	hsa-miR-6891-5p	0	1	0
chr13:48233343\|48233477	hsa-miR-6891-3p	0	1	0
chr13:48233343\|48233477	hsa-miR-4756-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:48233343\|48233477
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	LQSTATASGGMMSASSPLLGSSFLASFWARAELNVTFTMARPGA
Nucleotide Sequence	TTGCAGTCCACCGCGACGGCGTCGGGGGGGATGATGAGCGCCTCCTCGCCGCTCTTGGGCTCGTCCTTCTTGGCCTCCTTCTGGGCCAGAGCGGAGTTGAACGTCACCTTCACCATGGCGCGGCCTGGGGCG

CircID	chr13:48233343\|48233477
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MVKVTFNSALAQKEAKKDEPKSGEEALIIPPDAVAVDCK
Nucleotide Sequence	ATGGTGAAGGTGACGTTCAACTCCGCTCTGGCCCAGAAGGAGGCCAAGAAGGACGAGCCCAAGAGCGGCGAGGAGGCGCTCATCATCCCCCCCGACGCCGTCGCGGTGGACTGCAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information