CircNet

General Information

circRNA Basic Information

CircID	chr13:48258805\|48258938
Strand	-
CircType	exon
Host Gene	ENSG00000136156.11;
Algorism	CIRI2;
Sequence	CTATTTGCCTCAGTCCTATCTGATTCATGAGCACATGGTTATTACTGATCGCATTGAAAACATTGATCACCTGGGTTTCTTTATTTATCGACTGTGTCATGACAAGGAAACTTACAAACTGCAACGCAGAGAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:48258805\|48258938	hsa-miR-186-5p	0	0	1
chr13:48258805\|48258938	hsa-miR-186-3p	0	0	1
chr13:48258805\|48258938	hsa-miR-425-5p	0	0	1
chr13:48258805\|48258938	hsa-miR-425-3p	0	0	1
chr13:48258805\|48258938	hsa-miR-1305	0	0	1
chr13:48258805\|48258938	hsa-miR-1827	0	0	1
chr13:48258805\|48258938	hsa-miR-125a-3p	0	0	1
chr13:48258805\|48258938	hsa-miR-502-5p	0	0	1
chr13:48258805\|48258938	hsa-miR-5087	0	1	0
chr13:48258805\|48258938	hsa-miR-8060	1	0	0
chr13:48258805\|48258938	hsa-miR-33a-3p	0	1	0
chr13:48258805\|48258938	hsa-miR-3691-5p	1	0	0
chr13:48258805\|48258938	hsa-miR-937-5p	1	0	0
chr13:48258805\|48258938	hsa-miR-4714-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:48258805\|48258938
ORF Type	ORF1
Protein Length	43
Nucleotide Length	129
Protein Sequence	MPQSYLIHEHMVITDRIENIDHLGFFIYRLCHDKETYKLQRRE
Nucleotide Sequence	TTGCCTCAGTCCTATCTGATTCATGAGCACATGGTTATTACTGATCGCATTGAAAACATTGATCACCTGGGTTTCTTTATTTATCGACTGTGTCATGACAAGGAAACTTACAAACTGCAACGCAGAGAA

CircID	chr13:48258805\|48258938
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MSTWLLLIALKTLITWVSLFIDCVMTRKLTNCNAEK
Nucleotide Sequence	ATGAGCACATGGTTATTACTGATCGCATTGAAAACATTGATCACCTGGGTTTCTTTATTTATCGACTGTGTCATGACAAGGAAACTTACAAACTGCAACGCAGAGAAA

CircID	chr13:48258805\|48258938
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MQFVSFLVMTQSINKETQVINVFNAISNNHVLMNQIGLRQI
Nucleotide Sequence	TTGCAGTTTGTAAGTTTCCTTGTCATGACACAGTCGATAAATAAAGAAACCCAGGTGATCAATGTTTTCAATGCGATCAGTAATAACCATGTGCTCATGAATCAGATAGGACTGAGGCAAATA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information