CircRNA Information

General Information
circRNA Basic Information
CircID chr13:49336687|49336897
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTGTTTACTACTCCAATTGCCATCTTCCTTCCAGGGCCACTACTCGTTGTACCATGGACAAGCTTACCTCATTTGGCTATCCTTGTGGAGCCCTACAAATAACGAGTTCTGTTCTTTACGTATGCAGCTGTATAAAGAGAATACAACCTTATCTTCATCTGCTCTTAGCAAGCTTTCTGGACATGGGAGAACACAGCGCTGAAGTCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:49336687|49336897 hsa-let-7b-5p 0 0 1
chr13:49336687|49336897 hsa-let-7b-3p 0 0 1
chr13:49336687|49336897 hsa-let-7c-5p 0 0 1
chr13:49336687|49336897 hsa-let-7c-3p 0 0 1
chr13:49336687|49336897 hsa-let-7d-5p 0 0 1
chr13:49336687|49336897 hsa-let-7d-3p 0 0 1
chr13:49336687|49336897 hsa-let-7e-5p 0 0 1
chr13:49336687|49336897 hsa-let-7e-3p 0 0 1
chr13:49336687|49336897 hsa-miR-30a-5p 0 0 1
chr13:49336687|49336897 hsa-miR-30a-3p 0 0 1
chr13:49336687|49336897 hsa-miR-98-5p 0 0 1
chr13:49336687|49336897 hsa-miR-98-3p 0 0 1
chr13:49336687|49336897 hsa-miR-198 1 1 1
chr13:49336687|49336897 hsa-miR-30d-5p 0 0 1
chr13:49336687|49336897 hsa-miR-30d-3p 0 0 1
chr13:49336687|49336897 hsa-let-7g-5p 0 0 1
chr13:49336687|49336897 hsa-let-7g-3p 0 0 1
chr13:49336687|49336897 hsa-let-7i-5p 0 0 1
chr13:49336687|49336897 hsa-let-7i-3p 0 0 1
chr13:49336687|49336897 hsa-miR-30b-5p 0 0 1
chr13:49336687|49336897 hsa-miR-30b-3p 0 0 1
chr13:49336687|49336897 hsa-miR-150-5p 0 0 1
chr13:49336687|49336897 hsa-miR-150-3p 0 0 1
chr13:49336687|49336897 hsa-miR-186-5p 0 0 1
chr13:49336687|49336897 hsa-miR-186-3p 0 0 1
chr13:49336687|49336897 hsa-miR-30e-5p 0 0 1
chr13:49336687|49336897 hsa-miR-30e-3p 0 0 1
chr13:49336687|49336897 hsa-miR-328-5p 0 0 1
chr13:49336687|49336897 hsa-miR-328-3p 0 0 1
chr13:49336687|49336897 hsa-miR-202-5p 0 0 1
chr13:49336687|49336897 hsa-miR-202-3p 0 0 1
chr13:49336687|49336897 hsa-miR-617 0 0 1
chr13:49336687|49336897 hsa-miR-630 0 0 1
chr13:49336687|49336897 hsa-miR-663b 1 0 1
chr13:49336687|49336897 hsa-miR-1291 1 1 1
chr13:49336687|49336897 hsa-miR-1252-5p 0 0 1
chr13:49336687|49336897 hsa-miR-1252-3p 0 0 1
chr13:49336687|49336897 hsa-miR-532-3p 1 0 1
chr13:49336687|49336897 hsa-miR-30c 0 0 1
chr13:49336687|49336897 hsa-let-7a 0 0 1
chr13:49336687|49336897 hsa-let-7f 0 0 1
chr13:49336687|49336897 hsa-miR-923 0 0 1
chr13:49336687|49336897 hsa-miR-638 1 0 0
chr13:49336687|49336897 hsa-miR-760 1 0 0
chr13:49336687|49336897 hsa-miR-2861 1 0 0
chr13:49336687|49336897 hsa-miR-3185 1 0 0
chr13:49336687|49336897 hsa-miR-4273 0 1 0
chr13:49336687|49336897 hsa-miR-4281 1 0 0
chr13:49336687|49336897 hsa-miR-3916 1 1 0
chr13:49336687|49336897 hsa-miR-4468 0 1 0
chr13:49336687|49336897 hsa-miR-4533 1 1 0
chr13:49336687|49336897 hsa-miR-4662b 1 1 0
chr13:49336687|49336897 hsa-miR-4739 1 0 0
chr13:49336687|49336897 hsa-miR-5047 0 1 0
chr13:49336687|49336897 hsa-miR-5693 0 1 0
chr13:49336687|49336897 hsa-miR-6745 1 0 0
chr13:49336687|49336897 hsa-miR-7515 1 0 0
chr13:49336687|49336897 hsa-miR-8057 1 1 0
chr13:49336687|49336897 hsa-miR-9500 1 1 0
chr13:49336687|49336897 hsa-miR-7106-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6894-5p 1 0 0
chr13:49336687|49336897 hsa-miR-4687-3p 1 0 0
chr13:49336687|49336897 hsa-miR-7851-3p 1 0 0
chr13:49336687|49336897 hsa-miR-3192-5p 1 0 0
chr13:49336687|49336897 hsa-miR-4695-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6730-5p 1 0 0
chr13:49336687|49336897 hsa-miR-874-3p 1 0 0
chr13:49336687|49336897 hsa-miR-100-3p 0 1 0
chr13:49336687|49336897 hsa-miR-6871-5p 1 0 0
chr13:49336687|49336897 hsa-miR-3190-3p 1 1 0
chr13:49336687|49336897 hsa-miR-2467-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6760-5p 1 0 0
chr13:49336687|49336897 hsa-miR-5008-5p 1 0 0
chr13:49336687|49336897 hsa-miR-4713-5p 0 1 0
chr13:49336687|49336897 hsa-miR-5088-5p 0 1 0
chr13:49336687|49336897 hsa-miR-3202 1 0 0
chr13:49336687|49336897 hsa-miR-6830-5p 1 0 0
chr13:49336687|49336897 hsa-miR-135b-3p 0 1 0
chr13:49336687|49336897 hsa-miR-6869-5p 1 0 0
chr13:49336687|49336897 hsa-miR-7152-3p 1 0 0
chr13:49336687|49336897 hsa-miR-4742-3p 0 1 0
chr13:49336687|49336897 hsa-miR-518c-5p 1 1 0
chr13:49336687|49336897 hsa-miR-4796-3p 1 0 0
chr13:49336687|49336897 hsa-miR-2116-3p 0 1 0
chr13:49336687|49336897 hsa-miR-4639-5p 0 1 0
chr13:49336687|49336897 hsa-miR-1207-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6778-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6865-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6754-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6815-5p 1 0 0
chr13:49336687|49336897 hsa-miR-1249-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6780a-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6797-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6879-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6876-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6791-5p 1 0 0
chr13:49336687|49336897 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr13:49336687|49336897
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MPSSFQGHYSLYHGQAYLIWLSLWSPTNNEFCSLRMQLYKENTTLSSSALSKLSGHGRTQR
Nucleotide Sequence TTGCCATCTTCCTTCCAGGGCCACTACTCGTTGTACCATGGACAAGCTTACCTCATTTGGCTATCCTTGTGGAGCCCTACAAATAACGAGTTCTGTTCTTTACGTATGCAGCTGTATAAAGAGAATACAACCTTATCTTCATCTGCTCTTAGCAAGCTTTCTGGACATGGGAGAACACAGCGCTGA

CircID chr13:49336687|49336897
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MDKLTSFGYPCGALQITSSVLYVCSCIKRIQPYLHLLLASFLDMGEHSAEVT
Nucleotide Sequence ATGGACAAGCTTACCTCATTTGGCTATCCTTGTGGAGCCCTACAAATAACGAGTTCTGTTCTTTACGTATGCAGCTGTATAAAGAGAATACAACCTTATCTTCATCTGCTCTTAGCAAGCTTTCTGGACATGGGAGAACACAGCGCTGAAGTCACT

CircID chr13:49336687|49336897
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence LFTTPIAIFLPGPLLVVPWTSLPHLAILVEPYK
Nucleotide Sequence CTGTTTACTACTCCAATTGCCATCTTCCTTCCAGGGCCACTACTCGTTGTACCATGGACAAGCTTACCTCATTTGGCTATCCTTGTGGAGCCCTACAAATAA

CircID chr13:49336687|49336897
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MLRADEDKVVFSLYSCIRKEQNSLFVGLHKDSQMR
Nucleotide Sequence TTGCTAAGAGCAGATGAAGATAAGGTTGTATTCTCTTTATACAGCTGCATACGTAAAGAACAGAACTCGTTATTTGTAGGGCTCCACAAGGATAGCCAAATGAGGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites