CircRNA Information

General Information
circRNA Basic Information
CircID chr13:49486247|49486552
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTGCACCACAAAGACTCAAGAGTTTTCCAGCCCACCCCTCTTGTCATGCATCAAGTCACTACTGGCAATTAGACCAGAGGTCAGCAAAGTTCTCCTGCAGAAGGCAAAATAGCAAATATTTCAGGCTTTGCTGGCCATGTGGTGGTCTCTGTTGTGATTATTCAACTCTTGCTGTAATGTTGAAGCAGACAATATATAATGTAAATTGGCTGTATTCCAATAAAACTTACATTTTATTTTTTTTTTTGAGACAGGGTCTTGTTCTATCGCCCAGGCTGCAGTACCGTGGCACAATCATAGTTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:49486247|49486552 hsa-miR-10a-5p 0 0 1
chr13:49486247|49486552 hsa-miR-10a-3p 0 0 1
chr13:49486247|49486552 hsa-miR-10b-5p 0 0 1
chr13:49486247|49486552 hsa-miR-10b-3p 0 0 1
chr13:49486247|49486552 hsa-miR-217-5p 0 0 1
chr13:49486247|49486552 hsa-miR-217-3p 0 0 1
chr13:49486247|49486552 hsa-miR-146a-5p 0 0 1
chr13:49486247|49486552 hsa-miR-146a-3p 0 0 1
chr13:49486247|49486552 hsa-miR-34b-5p 0 0 1
chr13:49486247|49486552 hsa-miR-34b-3p 0 0 1
chr13:49486247|49486552 hsa-miR-346 0 0 1
chr13:49486247|49486552 hsa-miR-526b-5p 0 0 1
chr13:49486247|49486552 hsa-miR-526b-3p 0 0 1
chr13:49486247|49486552 hsa-miR-504-5p 0 0 1
chr13:49486247|49486552 hsa-miR-504-3p 0 0 1
chr13:49486247|49486552 hsa-miR-545-5p 0 0 1
chr13:49486247|49486552 hsa-miR-545-3p 0 0 1
chr13:49486247|49486552 hsa-miR-601 0 0 1
chr13:49486247|49486552 hsa-miR-608 1 1 1
chr13:49486247|49486552 hsa-miR-627-5p 0 0 1
chr13:49486247|49486552 hsa-miR-627-3p 0 0 1
chr13:49486247|49486552 hsa-miR-632 0 0 1
chr13:49486247|49486552 hsa-miR-661 0 0 1
chr13:49486247|49486552 hsa-miR-421 0 0 1
chr13:49486247|49486552 hsa-miR-541-5p 0 0 1
chr13:49486247|49486552 hsa-miR-541-3p 0 0 1
chr13:49486247|49486552 hsa-miR-924 0 0 1
chr13:49486247|49486552 hsa-miR-1227-5p 0 0 1
chr13:49486247|49486552 hsa-miR-1227-3p 0 0 1
chr13:49486247|49486552 hsa-miR-1231 0 0 1
chr13:49486247|49486552 hsa-miR-1237-5p 0 0 1
chr13:49486247|49486552 hsa-miR-1237-3p 0 0 1
chr13:49486247|49486552 hsa-miR-1202 0 0 1
chr13:49486247|49486552 hsa-miR-1205 0 1 1
chr13:49486247|49486552 hsa-miR-1286 0 0 1
chr13:49486247|49486552 hsa-miR-302f 0 0 1
chr13:49486247|49486552 hsa-miR-339-5p 0 1 1
chr13:49486247|49486552 hsa-miR-1184 0 0 1
chr13:49486247|49486552 hsa-miR-654-5p 0 1 1
chr13:49486247|49486552 hsa-miR-875-3p 0 0 1
chr13:49486247|49486552 hsa-miR-628-5p 0 0 1
chr13:49486247|49486552 hsa-miR-199b-3p 0 0 1
chr13:49486247|49486552 hsa-miR-199a-3p 0 0 1
chr13:49486247|49486552 hsa-miR-146b-5p 0 0 1
chr13:49486247|49486552 hsa-miR-509-3-5p 0 1 1
chr13:49486247|49486552 hsa-miR-509-5p 0 1 1
chr13:49486247|49486552 hsa-miR-508-3p 0 0 1
chr13:49486247|49486552 hsa-miR-371-5p 0 0 1
chr13:49486247|49486552 hsa-miR-323-3p 0 0 1
chr13:49486247|49486552 hsa-miR-544 0 0 1
chr13:49486247|49486552 hsa-miR-219-1-3p 0 0 1
chr13:49486247|49486552 hsa-miR-219-5p 0 0 1
chr13:49486247|49486552 hsa-miR-1293 1 0 0
chr13:49486247|49486552 hsa-miR-3137 1 1 0
chr13:49486247|49486552 hsa-miR-4421 0 1 0
chr13:49486247|49486552 hsa-miR-4505 1 0 0
chr13:49486247|49486552 hsa-miR-1587 1 0 0
chr13:49486247|49486552 hsa-miR-4651 1 0 0
chr13:49486247|49486552 hsa-miR-5194 0 1 0
chr13:49486247|49486552 hsa-miR-548ax 1 0 0
chr13:49486247|49486552 hsa-miR-6076 1 1 0
chr13:49486247|49486552 hsa-miR-9718 0 1 0
chr13:49486247|49486552 hsa-miR-12121 0 1 0
chr13:49486247|49486552 hsa-miR-134-5p 1 0 0
chr13:49486247|49486552 hsa-miR-150-3p 1 0 0
chr13:49486247|49486552 hsa-miR-7-5p 0 1 0
chr13:49486247|49486552 hsa-miR-8071 1 0 0
chr13:49486247|49486552 hsa-miR-4786-5p 0 1 0
chr13:49486247|49486552 hsa-miR-4722-5p 0 1 0
chr13:49486247|49486552 hsa-miR-185-3p 1 0 0
chr13:49486247|49486552 hsa-miR-6732-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6782-5p 1 1 0
chr13:49486247|49486552 hsa-miR-5006-5p 1 0 0
chr13:49486247|49486552 hsa-miR-4715-3p 1 0 0
chr13:49486247|49486552 hsa-miR-296-3p 1 0 0
chr13:49486247|49486552 hsa-miR-4650-3p 0 1 0
chr13:49486247|49486552 hsa-miR-4717-3p 0 1 0
chr13:49486247|49486552 hsa-miR-7152-3p 1 0 0
chr13:49486247|49486552 hsa-miR-7158-3p 0 1 0
chr13:49486247|49486552 hsa-miR-4680-5p 0 1 0
chr13:49486247|49486552 hsa-miR-584-5p 0 1 0
chr13:49486247|49486552 hsa-miR-942-3p 0 1 0
chr13:49486247|49486552 hsa-miR-5003-5p 0 1 0
chr13:49486247|49486552 hsa-miR-6769b-5p 1 0 0
chr13:49486247|49486552 hsa-miR-5001-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6756-5p 1 1 0
chr13:49486247|49486552 hsa-miR-6803-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6819-5p 1 0 0
chr13:49486247|49486552 hsa-miR-7107-5p 0 1 0
chr13:49486247|49486552 hsa-miR-7110-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6722-3p 1 0 0
chr13:49486247|49486552 hsa-miR-6751-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6774-5p 1 1 0
chr13:49486247|49486552 hsa-miR-3620-5p 1 0 0
chr13:49486247|49486552 hsa-miR-4726-5p 0 1 0
chr13:49486247|49486552 hsa-miR-6846-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6848-5p 1 0 0
chr13:49486247|49486552 hsa-miR-3940-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6766-5p 1 1 0
chr13:49486247|49486552 hsa-miR-6785-5p 1 0 0
chr13:49486247|49486552 hsa-miR-6824-3p 0 1 0
chr13:49486247|49486552 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr13:49486247|49486552
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence LCTTKTQEFSSPPLLSCIKSLLAIRPEVSKVLLQKAK
Nucleotide Sequence CTGTGCACCACAAAGACTCAAGAGTTTTCCAGCCCACCCCTCTTGTCATGCATCAAGTCACTACTGGCAATTAGACCAGAGGTCAGCAAAGTTCTCCTGCAGAAGGCAAAATAG

CircID chr13:49486247|49486552
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MLKQTIYNVNWLYSNKTYILFFFLRQGLVLSPRLQYRGTIIV
Nucleotide Sequence ATGTTGAAGCAGACAATATATAATGTAAATTGGCTGTATTCCAATAAAACTTACATTTTATTTTTTTTTTTGAGACAGGGTCTTGTTCTATCGCCCAGGCTGCAGTACCGTGGCACAATCATAGTT

CircID chr13:49486247|49486552
ORF Type ORF3
Protein Length 57
Nucleotide Length 174
Protein Sequence MCHGTAAWAIEQDPVSKKKIKCKFYWNTANLHYILSASTLQQELNNHNRDHHMASKA
Nucleotide Sequence TTGTGCCACGGTACTGCAGCCTGGGCGATAGAACAAGACCCTGTCTCAAAAAAAAAAATAAAATGTAAGTTTTATTGGAATACAGCCAATTTACATTATATATTGTCTGCTTCAACATTACAGCAAGAGTTGAATAATCACAACAGAGACCACCACATGGCCAGCAAAGCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites