CircRNA Information

General Information
circRNA Basic Information
CircID chr13:51784290|51784457
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTGTAGCAGTCAGCCTCTTATTTTGGAACTTGGCACTGGCAGTGCTACCTCTATGCTTTTGTCCTGCTGCTCCCCTGCCTGGAATGTCCCCTACCTGGCTAACTCATACTGCTCCTCTGTGACTCTGCTGGACACATTCCTTCCCCTGAGCCTGGTCAGATGCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:51784290|51784457 hsa-let-7b-5p 0 0 1
chr13:51784290|51784457 hsa-let-7b-3p 0 0 1
chr13:51784290|51784457 hsa-let-7c-5p 0 0 1
chr13:51784290|51784457 hsa-let-7c-3p 0 0 1
chr13:51784290|51784457 hsa-let-7d-5p 0 0 1
chr13:51784290|51784457 hsa-let-7d-3p 0 0 1
chr13:51784290|51784457 hsa-let-7e-5p 0 0 1
chr13:51784290|51784457 hsa-let-7e-3p 0 0 1
chr13:51784290|51784457 hsa-miR-15a-5p 0 0 1
chr13:51784290|51784457 hsa-miR-15a-3p 0 0 1
chr13:51784290|51784457 hsa-miR-98-5p 0 0 1
chr13:51784290|51784457 hsa-miR-98-3p 0 0 1
chr13:51784290|51784457 hsa-miR-198 0 0 1
chr13:51784290|51784457 hsa-miR-214-5p 0 0 1
chr13:51784290|51784457 hsa-miR-214-3p 0 0 1
chr13:51784290|51784457 hsa-miR-221-5p 0 0 1
chr13:51784290|51784457 hsa-miR-221-3p 0 0 1
chr13:51784290|51784457 hsa-miR-222-5p 0 0 1
chr13:51784290|51784457 hsa-miR-222-3p 0 0 1
chr13:51784290|51784457 hsa-let-7g-5p 0 0 1
chr13:51784290|51784457 hsa-let-7g-3p 0 0 1
chr13:51784290|51784457 hsa-let-7i-5p 0 0 1
chr13:51784290|51784457 hsa-let-7i-3p 0 0 1
chr13:51784290|51784457 hsa-miR-15b-5p 0 0 1
chr13:51784290|51784457 hsa-miR-15b-3p 0 0 1
chr13:51784290|51784457 hsa-miR-195-5p 0 0 1
chr13:51784290|51784457 hsa-miR-195-3p 0 0 1
chr13:51784290|51784457 hsa-miR-206 0 0 1
chr13:51784290|51784457 hsa-miR-424-5p 0 0 1
chr13:51784290|51784457 hsa-miR-424-3p 0 0 1
chr13:51784290|51784457 hsa-miR-484 0 1 1
chr13:51784290|51784457 hsa-miR-497-5p 0 0 1
chr13:51784290|51784457 hsa-miR-497-3p 0 0 1
chr13:51784290|51784457 hsa-miR-575 0 0 1
chr13:51784290|51784457 hsa-miR-613 0 0 1
chr13:51784290|51784457 hsa-miR-922 0 1 1
chr13:51784290|51784457 hsa-miR-939-5p 0 0 1
chr13:51784290|51784457 hsa-miR-939-3p 0 0 1
chr13:51784290|51784457 hsa-miR-940 0 0 1
chr13:51784290|51784457 hsa-miR-1286 0 1 1
chr13:51784290|51784457 hsa-miR-1266-5p 0 0 1
chr13:51784290|51784457 hsa-miR-1266-3p 0 0 1
chr13:51784290|51784457 hsa-miR-1252-5p 0 0 1
chr13:51784290|51784457 hsa-miR-1252-3p 0 0 1
chr13:51784290|51784457 hsa-miR-1825 0 0 1
chr13:51784290|51784457 hsa-miR-485-5p 0 1 1
chr13:51784290|51784457 hsa-miR-338-3p 0 0 1
chr13:51784290|51784457 hsa-miR-1207-5p 1 1 1
chr13:51784290|51784457 hsa-miR-16 0 0 1
chr13:51784290|51784457 hsa-let-7a 0 0 1
chr13:51784290|51784457 hsa-let-7f 0 0 1
chr13:51784290|51784457 hsa-miR-1 0 0 1
chr13:51784290|51784457 hsa-miR-24 0 0 1
chr13:51784290|51784457 hsa-miR-663a 1 1 0
chr13:51784290|51784457 hsa-miR-762 1 0 0
chr13:51784290|51784457 hsa-miR-761 0 1 0
chr13:51784290|51784457 hsa-miR-936 1 0 0
chr13:51784290|51784457 hsa-miR-2278 1 1 0
chr13:51784290|51784457 hsa-miR-3155a 0 1 0
chr13:51784290|51784457 hsa-miR-3175 1 0 0
chr13:51784290|51784457 hsa-miR-4271 0 1 0
chr13:51784290|51784457 hsa-miR-3937 1 0 0
chr13:51784290|51784457 hsa-miR-4422 0 1 0
chr13:51784290|51784457 hsa-miR-4436a 0 1 0
chr13:51784290|51784457 hsa-miR-4462 1 0 0
chr13:51784290|51784457 hsa-miR-4518 0 1 0
chr13:51784290|51784457 hsa-miR-4530 1 1 0
chr13:51784290|51784457 hsa-miR-4533 0 1 0
chr13:51784290|51784457 hsa-miR-4669 1 0 0
chr13:51784290|51784457 hsa-miR-4673 1 1 0
chr13:51784290|51784457 hsa-miR-4688 1 0 0
chr13:51784290|51784457 hsa-miR-4692 0 1 0
chr13:51784290|51784457 hsa-miR-4739 1 0 0
chr13:51784290|51784457 hsa-miR-5090 1 0 0
chr13:51784290|51784457 hsa-miR-5698 1 0 0
chr13:51784290|51784457 hsa-miR-5787 1 0 0
chr13:51784290|51784457 hsa-miR-6076 1 0 0
chr13:51784290|51784457 hsa-miR-6081 1 1 0
chr13:51784290|51784457 hsa-miR-6090 1 0 0
chr13:51784290|51784457 hsa-miR-6132 1 0 0
chr13:51784290|51784457 hsa-miR-7150 1 0 0
chr13:51784290|51784457 hsa-miR-8073 1 0 0
chr13:51784290|51784457 hsa-miR-12115 1 0 0
chr13:51784290|51784457 hsa-miR-12118 1 0 0
chr13:51784290|51784457 hsa-miR-12122 1 1 0
chr13:51784290|51784457 hsa-miR-4435 1 0 0
chr13:51784290|51784457 hsa-miR-6825-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6510-5p 1 1 0
chr13:51784290|51784457 hsa-miR-1236-5p 1 0 0
chr13:51784290|51784457 hsa-miR-3622a-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6746-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4722-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4755-3p 1 0 0
chr13:51784290|51784457 hsa-miR-6727-5p 1 0 0
chr13:51784290|51784457 hsa-miR-3622b-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6721-5p 1 0 0
chr13:51784290|51784457 hsa-miR-197-5p 1 0 0
chr13:51784290|51784457 hsa-miR-503-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6805-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6827-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6798-5p 1 0 0
chr13:51784290|51784457 hsa-miR-3126-5p 1 0 0
chr13:51784290|51784457 hsa-miR-486-3p 1 0 0
chr13:51784290|51784457 hsa-miR-2467-3p 1 0 0
chr13:51784290|51784457 hsa-miR-6810-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6786-5p 1 0 0
chr13:51784290|51784457 hsa-miR-5088-5p 1 0 0
chr13:51784290|51784457 hsa-miR-885-3p 1 0 0
chr13:51784290|51784457 hsa-miR-4690-5p 1 0 0
chr13:51784290|51784457 hsa-miR-877-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6847-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6824-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6789-5p 1 0 0
chr13:51784290|51784457 hsa-miR-7112-5p 1 0 0
chr13:51784290|51784457 hsa-miR-3944-5p 1 0 0
chr13:51784290|51784457 hsa-miR-520g-5p 0 1 0
chr13:51784290|51784457 hsa-miR-6890-3p 0 1 0
chr13:51784290|51784457 hsa-miR-10400-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4763-3p 1 1 0
chr13:51784290|51784457 hsa-miR-6787-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6893-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6775-5p 1 0 0
chr13:51784290|51784457 hsa-miR-1343-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6726-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6743-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6754-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6722-3p 1 1 0
chr13:51784290|51784457 hsa-miR-6779-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6780a-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6808-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6879-5p 1 0 0
chr13:51784290|51784457 hsa-miR-7111-5p 1 1 0
chr13:51784290|51784457 hsa-miR-4728-5p 1 1 0
chr13:51784290|51784457 hsa-miR-5196-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6780b-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6836-5p 1 0 0
chr13:51784290|51784457 hsa-miR-10396b-5p 1 0 0
chr13:51784290|51784457 hsa-miR-328-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4632-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4649-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4725-3p 1 1 0
chr13:51784290|51784457 hsa-miR-6794-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6887-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4697-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4723-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6885-5p 1 0 0
chr13:51784290|51784457 hsa-miR-365b-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6856-5p 1 0 0
chr13:51784290|51784457 hsa-miR-3679-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6750-5p 1 0 0
chr13:51784290|51784457 hsa-miR-4667-5p 1 1 0
chr13:51784290|51784457 hsa-miR-6762-5p 1 0 0
chr13:51784290|51784457 hsa-miR-9851-3p 1 0 0
chr13:51784290|51784457 hsa-miR-11181-5p 0 1 0
chr13:51784290|51784457 hsa-miR-3619-5p 1 0 0
chr13:51784290|51784457 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr13:51784290|51784457
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MALAVLPLCFCPAAPLPGMSPTWLTHTAPL
Nucleotide Sequence TTGGCACTGGCAGTGCTACCTCTATGCTTTTGTCCTGCTGCTCCCCTGCCTGGAATGTCCCCTACCTGGCTAACTCATACTGCTCCTCTGTGA
CircID chr13:51784290|51784457
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MELGTGSATSMLLSCCSPAWNVPYLANSYCSSVTLLDTFLPLSLVRCS
Nucleotide Sequence TTGGAACTTGGCACTGGCAGTGCTACCTCTATGCTTTTGTCCTGCTGCTCCCCTGCCTGGAATGTCCCCTACCTGGCTAACTCATACTGCTCCTCTGTGACTCTGCTGGACACATTCCTTCCCCTGAGCCTGGTCAGATGCTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab