CircRNA Information

General Information
circRNA Basic Information
CircID chr13:76884796|76884922
Strand +
CircType exon
Host Gene ENSG00000178695.5;
Algorism CIRI2;
Sequence CCCCACCTACCACTCCATGCTTTCTCTACTCCCTGCCTCAAACCACCCCTCCCCCAGATGGTACTTCAGTTTGGATCTATTGGGGGAGTGTGGCCACAGACCGGGGGATGATTGAATTGTTCAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr13:76884796|76884922 hsa-miR-122-5p 0 0 1
chr13:76884796|76884922 hsa-miR-122-3p 0 0 1
chr13:76884796|76884922 hsa-miR-588 0 0 1
chr13:76884796|76884922 hsa-miR-608 1 1 1
chr13:76884796|76884922 hsa-miR-625-5p 0 0 1
chr13:76884796|76884922 hsa-miR-625-3p 0 0 1
chr13:76884796|76884922 hsa-miR-637 0 0 1
chr13:76884796|76884922 hsa-miR-940 0 0 1
chr13:76884796|76884922 hsa-miR-663b 0 0 1
chr13:76884796|76884922 hsa-miR-1293 0 1 1
chr13:76884796|76884922 hsa-miR-1304-5p 0 0 1
chr13:76884796|76884922 hsa-miR-1304-3p 0 0 1
chr13:76884796|76884922 hsa-miR-1275 0 1 1
chr13:76884796|76884922 hsa-miR-1827 0 0 1
chr13:76884796|76884922 hsa-miR-361-3p 0 0 1
chr13:76884796|76884922 hsa-miR-876-3p 0 0 1
chr13:76884796|76884922 hsa-miR-1207-5p 1 1 1
chr13:76884796|76884922 hsa-miR-663a 1 0 0
chr13:76884796|76884922 hsa-miR-762 1 0 0
chr13:76884796|76884922 hsa-miR-1268a 1 0 0
chr13:76884796|76884922 hsa-miR-3125 1 1 0
chr13:76884796|76884922 hsa-miR-3132 1 0 0
chr13:76884796|76884922 hsa-miR-3153 1 0 0
chr13:76884796|76884922 hsa-miR-3175 1 0 0
chr13:76884796|76884922 hsa-miR-4298 1 0 0
chr13:76884796|76884922 hsa-miR-4311 1 0 0
chr13:76884796|76884922 hsa-miR-4260 1 1 0
chr13:76884796|76884922 hsa-miR-4270 1 1 0
chr13:76884796|76884922 hsa-miR-4271 1 0 0
chr13:76884796|76884922 hsa-miR-3916 1 0 0
chr13:76884796|76884922 hsa-miR-1268b 1 0 0
chr13:76884796|76884922 hsa-miR-4441 1 0 0
chr13:76884796|76884922 hsa-miR-4458 1 0 0
chr13:76884796|76884922 hsa-miR-4489 1 0 0
chr13:76884796|76884922 hsa-miR-4510 1 1 0
chr13:76884796|76884922 hsa-miR-4514 1 0 0
chr13:76884796|76884922 hsa-miR-3978 1 0 0
chr13:76884796|76884922 hsa-miR-4651 1 1 0
chr13:76884796|76884922 hsa-miR-4688 1 0 0
chr13:76884796|76884922 hsa-miR-4706 1 0 0
chr13:76884796|76884922 hsa-miR-4739 1 0 0
chr13:76884796|76884922 hsa-miR-5090 1 0 0
chr13:76884796|76884922 hsa-miR-5698 1 1 0
chr13:76884796|76884922 hsa-miR-6086 1 0 0
chr13:76884796|76884922 hsa-miR-6127 1 0 0
chr13:76884796|76884922 hsa-miR-6129 1 0 0
chr13:76884796|76884922 hsa-miR-6130 1 0 0
chr13:76884796|76884922 hsa-miR-6132 1 0 0
chr13:76884796|76884922 hsa-miR-6133 1 0 0
chr13:76884796|76884922 hsa-miR-7150 1 0 0
chr13:76884796|76884922 hsa-miR-8072 1 0 0
chr13:76884796|76884922 hsa-miR-8089 1 0 0
chr13:76884796|76884922 hsa-miR-211-3p 1 0 0
chr13:76884796|76884922 hsa-miR-4433b-3p 1 1 0
chr13:76884796|76884922 hsa-miR-504-3p 1 0 0
chr13:76884796|76884922 hsa-miR-6747-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6765-5p 1 1 0
chr13:76884796|76884922 hsa-miR-7106-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6825-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6089 1 0 0
chr13:76884796|76884922 hsa-miR-6807-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6890-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6727-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6721-5p 1 0 0
chr13:76884796|76884922 hsa-miR-197-5p 1 1 0
chr13:76884796|76884922 hsa-miR-7845-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6772-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6732-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6798-5p 1 0 0
chr13:76884796|76884922 hsa-miR-486-3p 1 0 0
chr13:76884796|76884922 hsa-miR-6760-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6782-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6514-5p 0 1 0
chr13:76884796|76884922 hsa-miR-6835-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6740-5p 1 1 0
chr13:76884796|76884922 hsa-miR-4640-5p 1 0 0
chr13:76884796|76884922 hsa-miR-1908-5p 1 0 0
chr13:76884796|76884922 hsa-let-7b-5p 1 0 0
chr13:76884796|76884922 hsa-miR-3202 1 0 0
chr13:76884796|76884922 hsa-miR-149-3p 1 0 0
chr13:76884796|76884922 hsa-miR-937-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6824-5p 1 0 0
chr13:76884796|76884922 hsa-miR-3162-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6802-5p 0 1 0
chr13:76884796|76884922 hsa-miR-6828-5p 1 0 0
chr13:76884796|76884922 hsa-miR-7112-5p 1 0 0
chr13:76884796|76884922 hsa-let-7c-5p 1 0 0
chr13:76884796|76884922 hsa-let-7e-5p 1 0 0
chr13:76884796|76884922 hsa-miR-519d-5p 0 1 0
chr13:76884796|76884922 hsa-miR-7113-5p 1 0 0
chr13:76884796|76884922 hsa-miR-520g-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6509-5p 1 0 0
chr13:76884796|76884922 hsa-miR-5585-5p 0 1 0
chr13:76884796|76884922 hsa-miR-4763-3p 1 1 0
chr13:76884796|76884922 hsa-miR-6778-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6787-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6812-5p 0 1 0
chr13:76884796|76884922 hsa-miR-6870-5p 0 1 0
chr13:76884796|76884922 hsa-miR-6893-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6737-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6743-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6752-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6754-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6756-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6803-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6819-5p 1 0 0
chr13:76884796|76884922 hsa-miR-7110-5p 1 0 0
chr13:76884796|76884922 hsa-miR-1249-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6722-3p 1 0 0
chr13:76884796|76884922 hsa-miR-6779-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6797-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6808-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6879-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4728-5p 1 1 0
chr13:76884796|76884922 hsa-miR-5196-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6780b-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6836-5p 1 0 0
chr13:76884796|76884922 hsa-miR-10396b-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4649-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4749-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6738-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6777-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6846-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6858-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6883-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6889-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4436b-3p 1 0 0
chr13:76884796|76884922 hsa-miR-6831-5p 1 0 0
chr13:76884796|76884922 hsa-miR-939-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6511a-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6856-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4665-5p 0 1 0
chr13:76884796|76884922 hsa-miR-4716-3p 1 0 0
chr13:76884796|76884922 hsa-miR-6785-5p 1 1 0
chr13:76884796|76884922 hsa-miR-6849-5p 1 0 0
chr13:76884796|76884922 hsa-miR-6753-3p 0 1 0
chr13:76884796|76884922 hsa-miR-7107-3p 0 1 0
chr13:76884796|76884922 hsa-miR-6859-5p 1 0 0
chr13:76884796|76884922 hsa-miR-4701-5p 0 1 0
chr13:76884796|76884922 hsa-miR-135a-2-3p 1 0 0
chr13:76884796|76884922 hsa-miR-216b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr13:76884796|76884922
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MLSLLPASNHPSPRWYFSLDLLGECGHRPGDD
Nucleotide Sequence ATGCTTTCTCTACTCCCTGCCTCAAACCACCCCTCCCCCAGATGGTACTTCAGTTTGGATCTATTGGGGGAGTGTGGCCACAGACCGGGGGATGATTGA
CircID chr13:76884796|76884922
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPQTTPPPDGTSVWIYWGSVATDRGMIELFR
Nucleotide Sequence CTGCCTCAAACCACCCCTCCCCCAGATGGTACTTCAGTTTGGATCTATTGGGGGAGTGTGGCCACAGACCGGGGGATGATTGAATTGTTCAGA
CircID chr13:76884796|76884922
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MWPHSPNRSKLKYHLGEGWFEAGSRESMEW
Nucleotide Sequence CTGTGGCCACACTCCCCCAATAGATCCAAACTGAAGTACCATCTGGGGGAGGGGTGGTTTGAGGCAGGGAGTAGAGAAAGCATGGAGTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab