CircNet

General Information

circRNA Basic Information

CircID	chr13:77273472\|77296674
Strand	-
CircType	exon
Host Gene	ENSG00000005810.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAATAAGAAAATTTTAAATAAGAAGAAATTGAAAAGAAAACAGAAGAGCAAATCAAAAGTGAAGACAAGAAGCAAGAGTCTCTCTTCCAGCTTCTTTTGGAAATCACCGTTCGAAGTACTGGGATGAATGACAGCACAGGACAGTCCTTAACAGCACTTTCCTGTGCTTGCCTCTTTAGTCTGGTGGCTTCTTGGGGAGAAACAGGAAGGACACTTCAGGCCATCTCTGCTATCCTCACCAACAATGGAAGCCATGCTTGCCAAACTATTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:77273472\|77296674	hsa-miR-15a-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:77273472\|77296674
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MNDSTGQSLTALSCACLFSLVASWGETGRTLQAISAILTNNGSHACQTIQ
Nucleotide Sequence	ATGAATGACAGCACAGGACAGTCCTTAACAGCACTTTCCTGTGCTTGCCTCTTTAGTCTGGTGGCTTCTTGGGGAGAAACAGGAAGGACACTTCAGGCCATCTCTGCTATCCTCACCAACAATGGAAGCCATGCTTGCCAAACTATTCAG

CircID	chr13:77273472\|77296674
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MASIVGEDSRDGLKCPSCFSPRSHQTKEASTGKCC*
Nucleotide Sequence	ATGGCTTCCATTGTTGGTGAGGATAGCAGAGATGGCCTGAAGTGTCCTTCCTGTTTCTCCCCAAGAAGCCACCAGACTAAAGAGGCAAGCACAGGAAAGTGCTGTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:77273472\|77296674	ELAVL1	2	3	1
chr13:77273472\|77296674	ZNF184	0	0	1
chr13:77273472\|77296674	U2AF2	3	3	0
chr13:77273472\|77296674	BUD13	0	0	1
chr13:77273472\|77296674	NOP58	2	1	3
chr13:77273472\|77296674	SRSF3	0	1	0
chr13:77273472\|77296674	HNRNPC	3	3	0
chr13:77273472\|77296674	ACIN1	3	0	2
chr13:77273472\|77296674	SRSF9	0	0	1
chr13:77273472\|77296674	RANGAP1	0	0	1
chr13:77273472\|77296674	DDX54	0	0	4
chr13:77273472\|77296674	TARDBP	0	1	0
chr13:77273472\|77296674	PCBP2	1	0	0
chr13:77273472\|77296674	WDR33	0	1	0
chr13:77273472\|77296674	FMR1	0	0	1
chr13:77273472\|77296674	SRSF1	2	0	1
chr13:77273472\|77296674	IGF2BP2	1	0	1
chr13:77273472\|77296674	CPSF3	1	0	0
chr13:77273472\|77296674	TRA2A	0	0	4
chr13:77273472\|77296674	EIF4A3	1	0	5
chr13:77273472\|77296674	FBL	2	0	2

CircRNA Information