CircNet

General Information

circRNA Basic Information

CircID	chr13:95161189\|95164518
Strand	-
CircType	exon
Host Gene	ENSG00000125257.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	ACAGAGAATGTCCCAGTTACACTATCAGAGGAGAACCGTTCTGAAGGAAAAGTTGGTTTTCAGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACTGGATTGTCTTCATTTTCCTTATTCTCCTAAACACTGCAGCTCAGGTTGCCTATGTGCTTCAAGATTGGTGGCTTTCATACTGGTTTAACTGTAGCTACCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTATTCTACGTCCTTGTTAACTCTTCACAAACTTTGCACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:95161189\|95164518
ORF Type	ORF1
Protein Length	59
Nucleotide Length	177
Protein Sequence	MCFKIGGFHTGLTVATVLFGIARSLLVFYVLVNSSQTLHNKMFESILKAPVLFFDRNPI
Nucleotide Sequence	ATGTGCTTCAAGATTGGTGGCTTTCATACTGGTTTAACTGTAGCTACCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTATTCTACGTCCTTGTTAACTCTTCACAAACTTTGCACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATA

CircID	chr13:95161189\|95164518
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MSQLHYQRRTVLKEKLVFRPIRITSELVLTGLSSFSLFS*
Nucleotide Sequence	ATGTCCCAGTTACACTATCAGAGGAGAACCGTTCTGAAGGAAAAGTTGGTTTTCAGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACTGGATTGTCTTCATTTTCCTTATTCTCCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:95161189\|95164518	U2AF2	8	6	5
chr13:95161189\|95164518	ELAVL1	4	1	1
chr13:95161189\|95164518	TAF15	1	0	0
chr13:95161189\|95164518	FMR1	0	0	2
chr13:95161189\|95164518	FUS	1	1	1
chr13:95161189\|95164518	NOP58	0	0	2
chr13:95161189\|95164518	NOP56	0	1	0
chr13:95161189\|95164518	PTBP1	0	9	0
chr13:95161189\|95164518	HNRNPC	5	4	0
chr13:95161189\|95164518	LIN28B	2	2	4
chr13:95161189\|95164518	LIN28A	1	0	0
chr13:95161189\|95164518	IGF2BP1	0	0	5
chr13:95161189\|95164518	IGF2BP3	0	0	2
chr13:95161189\|95164518	IGF2BP2	0	0	2
chr13:95161189\|95164518	TARDBP	0	1	0
chr13:95161189\|95164518	YTHDC1	1	0	0
chr13:95161189\|95164518	BUD13	1	0	0
chr13:95161189\|95164518	TIA1	0	1	0
chr13:95161189\|95164518	TIAL1	0	1	0
chr13:95161189\|95164518	FBL	1	0	1
chr13:95161189\|95164518	EWSR1	0	0	1
chr13:95161189\|95164518	EIF4A3	1	5	5
chr13:95161189\|95164518	AGO2	0	0	5

CircRNA Information