CircNet

General Information

circRNA Basic Information

CircID	chr13:98457168\|98519473
Strand	-
CircType	exon
Host Gene	ENSG00000102572.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	AACCTAAAGGCAGACCCAGAAGAGCTTTTTACAAAACTAGAGAAAATTGGGAAGGGCTCCTTTGGAGAGGTGTTCAAAGGCATTGACAATCGGACTCAGAAAGTGGTTGCCATAAAGATCATTGATCTGGAAGAAGCTGAAGATGAGATAGAGGACATTCAACAAGAAATCACAGTGCTGAGTCAGTGTGACAGTCCATATGTAACCAAATATTATGGATCCTATCTGAAGGATACAAAATTATGGATAATAATGGAATATCTTGGTGGAGGCTCCGCACTAGATCTATTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGCGTGCCCTGGCATCTCCGACACCATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:98457168\|98519473
ORF Type	ORF1
Protein Length	118
Nucleotide Length	354
Protein Sequence	VFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLKEKSQACGGNLGSIEELRGAIYLAEEACPGISDTMVAQLVQRLQ
Nucleotide Sequence	GTGTTCAAAGGCATTGACAATCGGACTCAGAAAGTGGTTGCCATAAAGATCATTGATCTGGAAGAAGCTGAAGATGAGATAGAGGACATTCAACAAGAAATCACAGTGCTGAGTCAGTGTGACAGTCCATATGTAACCAAATATTATGGATCCTATCTGAAGGATACAAAATTATGGATAATAATGGAATATCTTGGTGGAGGCTCCGCACTAGATCTATTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAACTTGGGGTCCATTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGGAGGCGTGCCCTGGCATCTCCGACACCATGGTGGCCCAGCTCGTGCAGCGGCTCCAG

CircID	chr13:98457168\|98519473
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MAPRSSSMDPKFPPHAWLFSFNRSSAEPPPRYSIIIHNFVSFR*
Nucleotide Sequence	ATGGCCCCTCGCAGCTCTTCAATGGACCCCAAGTTCCCTCCGCACGCCTGGCTCTTCTCCTTCAATAGATCTAGTGCGGAGCCTCCACCAAGATATTCCATTATTATCCATAATTTTGTATCCTTCAGATAG

CircID	chr13:98457168\|98519473
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MDNNGISWWRLRTRSIEGEEPGVRRELGVH*
Nucleotide Sequence	ATGGATAATAATGGAATATCTTGGTGGAGGCTCCGCACTAGATCTATTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAACTTGGGGTCCATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr13:98457168\|98519473	ELAVL1	1	3	2
chr13:98457168\|98519473	SF3B4	0	1	0
chr13:98457168\|98519473	FAM120A	0	0	1
chr13:98457168\|98519473	CELF2	0	2	0
chr13:98457168\|98519473	PRPF8	0	3	1
chr13:98457168\|98519473	TAF15	1	0	1
chr13:98457168\|98519473	FMR1	1	1	6
chr13:98457168\|98519473	NUDT21	1	0	0
chr13:98457168\|98519473	CNBP	0	1	0
chr13:98457168\|98519473	FUS	1	5	0
chr13:98457168\|98519473	SRSF1	0	0	1
chr13:98457168\|98519473	NOP58	0	2	3
chr13:98457168\|98519473	U2AF1	0	0	2
chr13:98457168\|98519473	U2AF2	4	0	2
chr13:98457168\|98519473	DDX54	1	1	9
chr13:98457168\|98519473	RBM10	3	5	0
chr13:98457168\|98519473	HNRNPM	0	3	0
chr13:98457168\|98519473	PTBP1	0	0	2
chr13:98457168\|98519473	TRA2A	0	0	2
chr13:98457168\|98519473	DDX3X	0	0	1
chr13:98457168\|98519473	MSI2	0	0	1
chr13:98457168\|98519473	LIN28B	0	0	3
chr13:98457168\|98519473	LIN28A	0	0	2
chr13:98457168\|98519473	FXR1	0	0	3
chr13:98457168\|98519473	FXR2	0	0	3
chr13:98457168\|98519473	IGF2BP1	0	0	4
chr13:98457168\|98519473	IGF2BP3	0	0	2
chr13:98457168\|98519473	IGF2BP2	0	2	12
chr13:98457168\|98519473	NPM1	1	0	0
chr13:98457168\|98519473	TARDBP	0	2	0
chr13:98457168\|98519473	BUD13	0	1	3
chr13:98457168\|98519473	RBFOX2	2	0	0
chr13:98457168\|98519473	RBM47	0	0	2
chr13:98457168\|98519473	CSTF2T	0	0	2
chr13:98457168\|98519473	AGO2	0	1	3
chr13:98457168\|98519473	EIF4A3	4	3	5
chr13:98457168\|98519473	FBL	1	1	2

CircRNA Information