CircNet

General Information

circRNA Basic Information

CircID	chr13:98794251\|98794445
Strand	+
CircType	exon
Host Gene	ENSG00000088387.16;
Algorism	CIRI2;
Sequence	ATATTTTTTTAAATCTCACTGGCAATATTCAAAGTTTTCATTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTTTATTCTTCCTTGCAGAGTAGTGTTAGAATAGATGGCCTACAGAAAAAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGGGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:98794251\|98794445	hsa-miR-208a-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-208a-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-148a-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-148a-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-223-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-223-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-141-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-141-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-152-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-152-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-200a-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-200a-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-148b-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-148b-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-335-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-335-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-570-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-570-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-641	0	0	1
chr13:98794251\|98794445	hsa-miR-208b-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-208b-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-934	0	0	1
chr13:98794251\|98794445	hsa-miR-1228-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-1228-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-1202	0	0	1
chr13:98794251\|98794445	hsa-miR-361-3p	0	1	1
chr13:98794251\|98794445	hsa-miR-140-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-768-3p	0	0	1
chr13:98794251\|98794445	hsa-miR-499-5p	0	0	1
chr13:98794251\|98794445	hsa-miR-134-3p	0	1	0
chr13:98794251\|98794445	hsa-miR-4726-3p	1	0	0
chr13:98794251\|98794445	hsa-miR-6809-5p	0	1	0
chr13:98794251\|98794445	hsa-miR-6840-5p	1	0	0
chr13:98794251\|98794445	hsa-miR-4697-3p	0	1	0
chr13:98794251\|98794445	hsa-miR-7113-3p	0	1	0
chr13:98794251\|98794445	hsa-miR-6743-3p	1	0	0
chr13:98794251\|98794445	hsa-miR-502-5p	0	1	0
chr13:98794251\|98794445	hsa-miR-4722-3p	0	1	0
chr13:98794251\|98794445	hsa-miR-6817-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:98794251\|98794445
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MQSSVRIDGLQKKKVLGSTWQGGLH
Nucleotide Sequence	TTGCAGAGTAGTGTTAGAATAGATGGCCTACAGAAAAAAAAGGTTCTGGGATCTACATGGCAGGGAGGGCTGCACTGA

CircID	chr13:98794251\|98794445
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MCLNKGVVDTLELDLDFILPCRVVLE
Nucleotide Sequence	TTGTGTCTTAACAAAGGTGTGGTAGACACTCTTGAGCTGGACTTAGATTTTATTCTTCCTTGCAGAGTAGTGTTAGAATAG

CircID	chr13:98794251\|98794445
ORF Type	ORF3
Protein Length	29
Nucleotide Length	90
Protein Sequence	MQGRIKSKSSSRVSTTPLLRHNENFEYCQ
Nucleotide Sequence	CTGCAAGGAAGAATAAAATCTAAGTCCAGCTCAAGAGTGTCTACCACACCTTTGTTAAGACACAATGAAAACTTTGAATATTGCCAGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information