CircNet

General Information

circRNA Basic Information

CircID	chr13:98829359\|98829495
Strand	-
CircType	exon
Host Gene	ENSG00000088387.16;
Algorism	CIRI2;
Sequence	GTCTTCCTGAGCTCGGGCGTGCTGGCATAGGATTTGGCCAGGCTGTACTGGAGGTCCACCAGCATCTCTGGGTCGTTCTCATGCTCCTTCATCTGGGCGGTGGCCATTAGCACCGTGCGTATCCTTTTGGTTAAGTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr13:98829359\|98829495	hsa-miR-146a-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-146a-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-492	0	0	1
chr13:98829359\|98829495	hsa-miR-551a	0	0	1
chr13:98829359\|98829495	hsa-miR-551b-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-551b-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-588	0	0	1
chr13:98829359\|98829495	hsa-miR-589-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-589-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-873-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-873-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-1202	0	0	1
chr13:98829359\|98829495	hsa-miR-1250-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-1250-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-1252-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-1252-3p	0	0	1
chr13:98829359\|98829495	hsa-miR-770-5p	0	1	1
chr13:98829359\|98829495	hsa-miR-146b-5p	0	0	1
chr13:98829359\|98829495	hsa-miR-521	0	0	1
chr13:98829359\|98829495	hsa-miR-7	0	0	1
chr13:98829359\|98829495	hsa-miR-138	0	0	1
chr13:98829359\|98829495	hsa-miR-661	1	0	0
chr13:98829359\|98829495	hsa-miR-4456	0	1	0
chr13:98829359\|98829495	hsa-miR-4479	1	0	0
chr13:98829359\|98829495	hsa-miR-3972	0	1	0
chr13:98829359\|98829495	hsa-miR-4688	1	0	0
chr13:98829359\|98829495	hsa-miR-4739	1	0	0
chr13:98829359\|98829495	hsa-miR-6894-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-4756-3p	0	1	0
chr13:98829359\|98829495	hsa-miR-4783-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-1225-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-6775-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-6743-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-324-3p	1	0	0
chr13:98829359\|98829495	hsa-miR-10398-3p	1	0	0
chr13:98829359\|98829495	hsa-miR-3130-5p	1	0	0
chr13:98829359\|98829495	hsa-miR-1295b-5p	0	1	0
chr13:98829359\|98829495	hsa-miR-1912-3p	0	1	0
chr13:98829359\|98829495	hsa-miR-4712-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr13:98829359\|98829495
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MARLYWRSTSISGSFSCSFIWAVAISTVRILLVK
Nucleotide Sequence	TTGGCCAGGCTGTACTGGAGGTCCACCAGCATCTCTGGGTCGTTCTCATGCTCCTTCATCTGGGCGGTGGCCATTAGCACCGTGCGTATCCTTTTGGTTAAG

CircID	chr13:98829359\|98829495
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MATAQMKEHENDPEMLVDLQYSLAKSYASTPELRK
Nucleotide Sequence	ATGGCCACCGCCCAGATGAAGGAGCATGAGAACGACCCAGAGATGCTGGTGGACCTCCAGTACAGCCTGGCCAAATCCTATGCCAGCACGCCCGAGCTCAGGAAG

CircID	chr13:98829359\|98829495
ORF Type	ORF3
Protein Length	27
Nucleotide Length	81
Protein Sequence	MRTTQRCWWTSSTAWPNPMPARPSSGR
Nucleotide Sequence	ATGAGAACGACCCAGAGATGCTGGTGGACCTCCAGTACAGCCTGGCCAAATCCTATGCCAGCACGCCCGAGCTCAGGAAGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information