CircRNA Information

General Information
circRNA Basic Information
CircID chr14:100291590|100291809
Strand -
CircType exon
Host Gene ENSG00000197119.11;
Algorism CIRI2;
Sequence CTCCACCGCTGGCCTGTTTGCTCCCCACCCTAGTCCCGCAGGCTGATATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCAGCAGGAGTGGCAGCAGCTGGGGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:100291590|100291809 hsa-miR-370-5p 0 0 1
chr14:100291590|100291809 hsa-miR-370-3p 0 0 1
chr14:100291590|100291809 hsa-miR-504-5p 0 0 1
chr14:100291590|100291809 hsa-miR-504-3p 0 0 1
chr14:100291590|100291809 hsa-miR-596 0 1 1
chr14:100291590|100291809 hsa-miR-597-5p 0 0 1
chr14:100291590|100291809 hsa-miR-597-3p 0 0 1
chr14:100291590|100291809 hsa-miR-650 0 1 1
chr14:100291590|100291809 hsa-miR-939-5p 0 0 1
chr14:100291590|100291809 hsa-miR-939-3p 0 0 1
chr14:100291590|100291809 hsa-miR-1287-5p 0 0 1
chr14:100291590|100291809 hsa-miR-1287-3p 0 0 1
chr14:100291590|100291809 hsa-miR-1243 0 0 1
chr14:100291590|100291809 hsa-miR-671-5p 1 1 1
chr14:100291590|100291809 hsa-miR-491-5p 0 0 1
chr14:100291590|100291809 hsa-miR-767-5p 0 1 1
chr14:100291590|100291809 hsa-miR-1289 0 0 1
chr14:100291590|100291809 hsa-miR-483-3p 0 0 1
chr14:100291590|100291809 hsa-miR-515-5p 0 0 1
chr14:100291590|100291809 hsa-miR-550 0 0 1
chr14:100291590|100291809 hsa-miR-564 1 0 0
chr14:100291590|100291809 hsa-miR-622 0 1 0
chr14:100291590|100291809 hsa-miR-637 1 1 0
chr14:100291590|100291809 hsa-miR-2110 1 0 0
chr14:100291590|100291809 hsa-miR-3125 0 1 0
chr14:100291590|100291809 hsa-miR-4294 0 1 0
chr14:100291590|100291809 hsa-miR-3916 0 1 0
chr14:100291590|100291809 hsa-miR-3135b 0 1 0
chr14:100291590|100291809 hsa-miR-4463 1 0 0
chr14:100291590|100291809 hsa-miR-4497 0 1 0
chr14:100291590|100291809 hsa-miR-4515 0 1 0
chr14:100291590|100291809 hsa-miR-4651 1 0 0
chr14:100291590|100291809 hsa-miR-4706 1 0 0
chr14:100291590|100291809 hsa-miR-4734 0 1 0
chr14:100291590|100291809 hsa-miR-5787 1 0 0
chr14:100291590|100291809 hsa-miR-6081 1 0 0
chr14:100291590|100291809 hsa-miR-6090 1 0 0
chr14:100291590|100291809 hsa-miR-7978 0 1 0
chr14:100291590|100291809 hsa-miR-12122 0 1 0
chr14:100291590|100291809 hsa-miR-103a-2-5p 0 1 0
chr14:100291590|100291809 hsa-miR-4731-5p 1 0 0
chr14:100291590|100291809 hsa-miR-4700-3p 1 1 0
chr14:100291590|100291809 hsa-miR-6836-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6825-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6857-5p 1 0 0
chr14:100291590|100291809 hsa-miR-1972 0 1 0
chr14:100291590|100291809 hsa-miR-766-3p 1 0 0
chr14:100291590|100291809 hsa-miR-3692-3p 0 1 0
chr14:100291590|100291809 hsa-miR-3692-5p 0 1 0
chr14:100291590|100291809 hsa-miR-6804-5p 0 1 0
chr14:100291590|100291809 hsa-miR-3622a-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6515-5p 0 1 0
chr14:100291590|100291809 hsa-miR-4695-5p 1 0 0
chr14:100291590|100291809 hsa-miR-4653-3p 1 0 0
chr14:100291590|100291809 hsa-miR-3187-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6787-3p 0 1 0
chr14:100291590|100291809 hsa-miR-4725-5p 0 1 0
chr14:100291590|100291809 hsa-miR-6827-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6782-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6882-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6786-5p 1 0 0
chr14:100291590|100291809 hsa-miR-1226-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6763-3p 1 0 0
chr14:100291590|100291809 hsa-miR-4786-3p 0 1 0
chr14:100291590|100291809 hsa-miR-4783-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6784-5p 1 0 0
chr14:100291590|100291809 hsa-miR-4640-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6847-5p 0 1 0
chr14:100291590|100291809 hsa-miR-149-3p 1 0 0
chr14:100291590|100291809 hsa-miR-550b-2-5p 0 1 0
chr14:100291590|100291809 hsa-miR-7156-3p 1 0 0
chr14:100291590|100291809 hsa-miR-7106-3p 1 0 0
chr14:100291590|100291809 hsa-miR-660-3p 0 1 0
chr14:100291590|100291809 hsa-miR-4758-3p 1 0 0
chr14:100291590|100291809 hsa-miR-744-5p 1 0 0
chr14:100291590|100291809 hsa-miR-875-5p 0 1 0
chr14:100291590|100291809 hsa-miR-6767-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6880-3p 1 0 0
chr14:100291590|100291809 hsa-miR-5582-3p 0 1 0
chr14:100291590|100291809 hsa-miR-6503-3p 0 1 0
chr14:100291590|100291809 hsa-miR-1233-5p 1 0 0
chr14:100291590|100291809 hsa-miR-1343-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6726-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6756-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6819-5p 1 0 0
chr14:100291590|100291809 hsa-miR-7107-5p 1 0 0
chr14:100291590|100291809 hsa-miR-10401-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6763-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6797-5p 1 0 0
chr14:100291590|100291809 hsa-miR-4728-5p 1 0 0
chr14:100291590|100291809 hsa-miR-10396a-5p 1 0 0
chr14:100291590|100291809 hsa-miR-328-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6777-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6889-5p 1 1 0
chr14:100291590|100291809 hsa-miR-6885-5p 1 0 0
chr14:100291590|100291809 hsa-miR-365a-5p 1 0 0
chr14:100291590|100291809 hsa-miR-3198 0 1 0
chr14:100291590|100291809 hsa-miR-6791-3p 1 1 0
chr14:100291590|100291809 hsa-miR-324-3p 1 1 0
chr14:100291590|100291809 hsa-miR-4646-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6766-5p 0 1 0
chr14:100291590|100291809 hsa-miR-4667-5p 0 1 0
chr14:100291590|100291809 hsa-miR-6753-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6762-5p 1 0 0
chr14:100291590|100291809 hsa-miR-6829-3p 1 0 0
chr14:100291590|100291809 hsa-miR-6783-3p 1 0 0
chr14:100291590|100291809 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:100291590|100291809
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MIWCLQQTPWLPGGCRVPSSPSSRSGSSWGTPSSGMWRSWGMQRIQFCDTRRHTKFSSV
Nucleotide Sequence CTGATATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCAGCAGGAGTGGCAGCAGCTGGGGTACCCCTAGCAGTGGCATGTGGAGAAGCTGGGGTATGCAGAGGATCCAGTTCTGTGACACCAGGAGGCACACCAAGTTTTCCTCTGTC
CircID chr14:100291590|100291809
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MACLLPTLVPQADMVPPADSMASRRVQGPQFTLQQEWQQLGYP
Nucleotide Sequence CTGGCCTGTTTGCTCCCCACCCTAGTCCCGCAGGCTGATATGGTGCCTCCAGCAGACTCCATGGCTTCCCGGAGGGTGCAGGGTCCCCAGTTCACCCTCCAGCAGGAGTGGCAGCAGCTGGGGTACCCCTAG
CircID chr14:100291590|100291809
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MDPLHTPASPHATARGTPAAATPAGG
Nucleotide Sequence CTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCTGCTGGAGGGTGA
CircID chr14:100291590|100291809
ORF Type ORF4
Protein Length 58
Nucleotide Length 177
Protein Sequence MVCLLVSQNWILCIPQLLHMPLLGVPQLLPLLLEGELGTLHPPGSHGVCWRHHISLRD
Nucleotide Sequence TTGGTGTGCCTCCTGGTGTCACAGAACTGGATCCTCTGCATACCCCAGCTTCTCCACATGCCACTGCTAGGGGTACCCCAGCTGCTGCCACTCCTGCTGGAGGGTGAACTGGGGACCCTGCACCCTCCGGGAAGCCATGGAGTCTGCTGGAGGCACCATATCAGCCTGCGGGACTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab