CircRNA Information

General Information
circRNA Basic Information
CircID chr14:100832560|100832776
Strand +
CircType exon
Host Gene ENSG00000214548.13;
Algorism CIRI2;
Sequence CCCGCTGAATGGACTTCGCACTGGGACAGAGGCAAAGACTTAAATGAGAAGCCAAAGAAATGTCGGCTCCATCACCAAAATTAGAAGTGTGGCTTAAGAAGCCACATCGCCCCGGCCCGGCGGTGGCCAGTTCACCTCATTATGATAATCAGTGTGTTTTTCCTTCGCAGACAAAGAAGGATCCTTATGCGACGAATACTGGAATCCAGCAGCTAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:100832560|100832776 hsa-miR-22-5p 0 0 1
chr14:100832560|100832776 hsa-miR-22-3p 0 0 1
chr14:100832560|100832776 hsa-miR-346 0 0 1
chr14:100832560|100832776 hsa-miR-487a-5p 0 0 1
chr14:100832560|100832776 hsa-miR-487a-3p 0 0 1
chr14:100832560|100832776 hsa-miR-193b-5p 0 0 1
chr14:100832560|100832776 hsa-miR-193b-3p 0 0 1
chr14:100832560|100832776 hsa-miR-588 0 0 1
chr14:100832560|100832776 hsa-miR-603 0 0 1
chr14:100832560|100832776 hsa-miR-632 0 0 1
chr14:100832560|100832776 hsa-miR-1264 0 0 1
chr14:100832560|100832776 hsa-miR-1181 0 0 1
chr14:100832560|100832776 hsa-miR-1231 0 0 1
chr14:100832560|100832776 hsa-miR-1237-5p 0 0 1
chr14:100832560|100832776 hsa-miR-1237-3p 0 0 1
chr14:100832560|100832776 hsa-miR-1287-5p 0 0 1
chr14:100832560|100832776 hsa-miR-1287-3p 0 0 1
chr14:100832560|100832776 hsa-miR-1248 0 0 1
chr14:100832560|100832776 hsa-miR-1252-5p 0 0 1
chr14:100832560|100832776 hsa-miR-1252-3p 0 0 1
chr14:100832560|100832776 hsa-miR-1825 0 0 1
chr14:100832560|100832776 hsa-miR-145-5p 0 0 1
chr14:100832560|100832776 hsa-miR-770-5p 0 0 1
chr14:100832560|100832776 hsa-miR-576-5p 0 0 1
chr14:100832560|100832776 hsa-miR-193a-3p 0 0 1
chr14:100832560|100832776 hsa-miR-590-3p 0 0 1
chr14:100832560|100832776 hsa-miR-9 0 0 1
chr14:100832560|100832776 hsa-miR-923 0 0 1
chr14:100832560|100832776 hsa-miR-4539 1 0 0
chr14:100832560|100832776 hsa-miR-4686 1 0 0
chr14:100832560|100832776 hsa-miR-5696 0 1 0
chr14:100832560|100832776 hsa-miR-8082 0 1 0
chr14:100832560|100832776 hsa-miR-12115 1 0 0
chr14:100832560|100832776 hsa-miR-1915-5p 1 0 0
chr14:100832560|100832776 hsa-miR-6868-3p 0 1 0
chr14:100832560|100832776 hsa-miR-6514-5p 1 0 0
chr14:100832560|100832776 hsa-miR-6815-3p 1 1 0
chr14:100832560|100832776 hsa-miR-5001-3p 1 0 0
chr14:100832560|100832776 hsa-miR-6830-3p 1 0 0
chr14:100832560|100832776 hsa-miR-4638-3p 1 0 0
chr14:100832560|100832776 hsa-miR-6717-5p 0 1 0
chr14:100832560|100832776 hsa-miR-6781-5p 0 1 0
chr14:100832560|100832776 hsa-miR-3190-5p 0 1 0
chr14:100832560|100832776 hsa-miR-5587-5p 0 1 0
chr14:100832560|100832776 hsa-miR-3152-5p 0 1 0
chr14:100832560|100832776 hsa-miR-1915-3p 1 0 0
chr14:100832560|100832776 hsa-miR-6819-3p 1 0 0
chr14:100832560|100832776 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:100832560|100832776
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MSAPSPKLEVWLKKPHRPGPAVASSPHYDNQCVFPSQTKKDPYATNTGIQQL
Nucleotide Sequence ATGTCGGCTCCATCACCAAAATTAGAAGTGTGGCTTAAGAAGCCACATCGCCCCGGCCCGGCGGTGGCCAGTTCACCTCATTATGATAATCAGTGTGTTTTTCCTTCGCAGACAAAGAAGGATCCTTATGCGACGAATACTGGAATCCAGCAGCTA

CircID chr14:100832560|100832776
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MATAGPGRCGFLSHTSNFGDGADISLASHLSLCLCPSAKSIQR
Nucleotide Sequence CTGGCCACCGCCGGGCCGGGGCGATGTGGCTTCTTAAGCCACACTTCTAATTTTGGTGATGGAGCCGACATTTCTTTGGCTTCTCATTTAAGTCTTTGCCTCTGTCCCAGTGCGAAGTCCATTCAGCGG

CircID chr14:100832560|100832776
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MSAKEKHTDYHNEVNWPPPGRGDVAS
Nucleotide Sequence TTGTCTGCGAAGGAAAAACACACTGATTATCATAATGAGGTGAACTGGCCACCGCCGGGCCGGGGCGATGTGGCTTCTTAA

CircID chr14:100832560|100832776
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MLDSSIRRIRILLCLRRKNTLIIIMR
Nucleotide Sequence CTGCTGGATTCCAGTATTCGTCGCATAAGGATCCTTCTTTGTCTGCGAAGGAAAAACACACTGATTATCATAATGAGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites