CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102027426|102027717
Strand -
CircType exon
Host Gene ENSG00000197102.9;
Algorism CIRI2;
Sequence GGACAGTGTTGAGACGTTCTGGCTGTAAAAATGAAAAGATAGCATTTATAATGGATGAATCTAATGTGTTAGATTCTGGATTCCTGGAGCGAATGAATACCCTTCTGGCCAATGGAGAGGTAATTAGGTGACGTGTTGCGTTGCATTACGTGTTACCGGGGGACCAGTAAGTCAGCACTGTGCTGTTTCCCAGGTGCCTGGTCTCTTTGAAGGAGACGAGTATGCCACCTTGATGACGCAGTGCAAAGAGGGGGCACAGAAGGAAGGCCTGATGCTGGACTCGCACGAGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102027426|102027717 hsa-miR-205-5p 0 0 1
chr14:102027426|102027717 hsa-miR-205-3p 0 0 1
chr14:102027426|102027717 hsa-miR-141-5p 0 0 1
chr14:102027426|102027717 hsa-miR-141-3p 0 0 1
chr14:102027426|102027717 hsa-miR-136-5p 0 0 1
chr14:102027426|102027717 hsa-miR-136-3p 0 0 1
chr14:102027426|102027717 hsa-miR-200a-5p 0 0 1
chr14:102027426|102027717 hsa-miR-200a-3p 0 0 1
chr14:102027426|102027717 hsa-miR-340-5p 0 0 1
chr14:102027426|102027717 hsa-miR-340-3p 0 0 1
chr14:102027426|102027717 hsa-miR-507 0 0 1
chr14:102027426|102027717 hsa-miR-557 1 0 1
chr14:102027426|102027717 hsa-miR-579-5p 0 0 1
chr14:102027426|102027717 hsa-miR-579-3p 0 0 1
chr14:102027426|102027717 hsa-miR-588 0 0 1
chr14:102027426|102027717 hsa-miR-1298-5p 0 0 1
chr14:102027426|102027717 hsa-miR-1298-3p 0 0 1
chr14:102027426|102027717 hsa-miR-891a-5p 0 0 1
chr14:102027426|102027717 hsa-miR-891a-3p 0 0 1
chr14:102027426|102027717 hsa-miR-665 0 0 1
chr14:102027426|102027717 hsa-miR-1237-5p 0 0 1
chr14:102027426|102027717 hsa-miR-1237-3p 0 0 1
chr14:102027426|102027717 hsa-miR-1248 0 0 1
chr14:102027426|102027717 hsa-miR-512-3p 0 1 1
chr14:102027426|102027717 hsa-miR-628-5p 0 0 1
chr14:102027426|102027717 hsa-miR-338-3p 0 1 1
chr14:102027426|102027717 hsa-miR-885-5p 0 0 1
chr14:102027426|102027717 hsa-miR-128 0 0 1
chr14:102027426|102027717 hsa-miR-664 0 0 1
chr14:102027426|102027717 hsa-miR-1913 1 0 0
chr14:102027426|102027717 hsa-miR-3142 0 1 0
chr14:102027426|102027717 hsa-miR-4297 0 1 0
chr14:102027426|102027717 hsa-miR-4269 0 1 0
chr14:102027426|102027717 hsa-miR-4428 0 1 0
chr14:102027426|102027717 hsa-miR-7851-3p 0 1 0
chr14:102027426|102027717 hsa-miR-4786-5p 0 1 0
chr14:102027426|102027717 hsa-miR-3192-5p 0 1 0
chr14:102027426|102027717 hsa-miR-4711-5p 0 1 0
chr14:102027426|102027717 hsa-miR-6868-3p 0 1 0
chr14:102027426|102027717 hsa-miR-4793-3p 1 0 0
chr14:102027426|102027717 hsa-miR-204-3p 0 1 0
chr14:102027426|102027717 hsa-miR-1289 0 1 0
chr14:102027426|102027717 hsa-miR-6889-3p 0 1 0
chr14:102027426|102027717 hsa-miR-1911-3p 0 1 0
chr14:102027426|102027717 hsa-miR-4761-5p 0 1 0
chr14:102027426|102027717 hsa-miR-503-3p 0 1 0
chr14:102027426|102027717 hsa-miR-5088-3p 1 0 0
chr14:102027426|102027717 hsa-miR-6800-3p 0 1 0
chr14:102027426|102027717 hsa-miR-15b-5p 0 1 0
chr14:102027426|102027717 hsa-miR-4650-5p 0 1 0
chr14:102027426|102027717 hsa-miR-6851-5p 1 0 0
chr14:102027426|102027717 hsa-miR-4700-5p 0 1 0
chr14:102027426|102027717 hsa-miR-4646-5p 0 1 0
chr14:102027426|102027717 hsa-miR-6529-3p 0 1 0
chr14:102027426|102027717 hsa-miR-497-5p 0 1 0
chr14:102027426|102027717 hsa-miR-101-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:102027426|102027717
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MRRSGCKNEKIAFIMDESNVLDSGFLERMNTLLANGEVIR
Nucleotide Sequence TTGAGACGTTCTGGCTGTAAAAATGAAAAGATAGCATTTATAATGGATGAATCTAATGTGTTAGATTCTGGATTCCTGGAGCGAATGAATACCCTTCTGGCCAATGGAGAGGTAATTAGGTGA

CircID chr14:102027426|102027717
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MCPLFALRHQGGILVSFKETRHLGNSTVLTYWSPGNT
Nucleotide Sequence CTGTGCCCCCTCTTTGCACTGCGTCATCAAGGTGGCATACTCGTCTCCTTCAAAGAGACCAGGCACCTGGGAAACAGCACAGTGCTGACTTACTGGTCCCCCGGTAACACGTAA

CircID chr14:102027426|102027717
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MARRVFIRSRNPESNTLDSSIINAIFSFLQPERLNTV
Nucleotide Sequence TTGGCCAGAAGGGTATTCATTCGCTCCAGGAATCCAGAATCTAACACATTAGATTCATCCATTATAAATGCTATCTTTTCATTTTTACAGCCAGAACGTCTCAACACTGTC

CircID chr14:102027426|102027717
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MQRNTSPNYLSIGQKGIHSLQESRI
Nucleotide Sequence ATGCAACGCAACACGTCACCTAATTACCTCTCCATTGGCCAGAAGGGTATTCATTCGCTCCAGGAATCCAGAATCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites