CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102029539|102029866
Strand +
CircType exon
Host Gene ENSG00000197102.9;
Algorism CIRI2;
Sequence CTCCAGCTCTTGGCTCTTTATCCTCAAGTCACGACGCAGTTCTTCTACCTAAAGAGCAAAGCCCACACTCAGAGACGAGAAACATGCAGAAATTATATGGAAAGGGGTCCTCACTGCAGCTCACTCCCGTGAGGAATTTGTGCCTGTGACGCACCTGGTCGACTGTCTCTTTGATCTTCCTGAGCCCCACGTTCAAGTGCATCTGCTGCTCCTCCAGCTCGCTCCGCTTCTCGTGGAACAGGTTGGCATAGTGATTGATGAAGTCCAGGTAGTGGCGAGGGGTGATGGCCATCGTTCTGCCGCCTCGCTTTGCTAGCCGAGCATTCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102029539|102029866 hsa-miR-15a-5p 0 0 1
chr14:102029539|102029866 hsa-miR-15a-3p 0 0 1
chr14:102029539|102029866 hsa-miR-15b-5p 0 0 1
chr14:102029539|102029866 hsa-miR-15b-3p 0 0 1
chr14:102029539|102029866 hsa-miR-195-5p 0 0 1
chr14:102029539|102029866 hsa-miR-195-3p 0 0 1
chr14:102029539|102029866 hsa-miR-34b-5p 0 0 1
chr14:102029539|102029866 hsa-miR-34b-3p 0 0 1
chr14:102029539|102029866 hsa-miR-335-5p 0 0 1
chr14:102029539|102029866 hsa-miR-335-3p 0 0 1
chr14:102029539|102029866 hsa-miR-196b-5p 0 0 1
chr14:102029539|102029866 hsa-miR-196b-3p 0 0 1
chr14:102029539|102029866 hsa-miR-422a 0 0 1
chr14:102029539|102029866 hsa-miR-424-5p 0 0 1
chr14:102029539|102029866 hsa-miR-424-3p 0 0 1
chr14:102029539|102029866 hsa-miR-497-5p 0 0 1
chr14:102029539|102029866 hsa-miR-497-3p 0 0 1
chr14:102029539|102029866 hsa-miR-558 0 0 1
chr14:102029539|102029866 hsa-miR-583 0 0 1
chr14:102029539|102029866 hsa-miR-587 0 0 1
chr14:102029539|102029866 hsa-miR-593-5p 0 0 1
chr14:102029539|102029866 hsa-miR-593-3p 0 0 1
chr14:102029539|102029866 hsa-miR-619-5p 0 0 1
chr14:102029539|102029866 hsa-miR-619-3p 0 0 1
chr14:102029539|102029866 hsa-miR-621 0 1 1
chr14:102029539|102029866 hsa-miR-649 0 0 1
chr14:102029539|102029866 hsa-miR-765 0 1 1
chr14:102029539|102029866 hsa-miR-887-5p 0 0 1
chr14:102029539|102029866 hsa-miR-887-3p 0 0 1
chr14:102029539|102029866 hsa-miR-873-5p 0 0 1
chr14:102029539|102029866 hsa-miR-873-3p 0 0 1
chr14:102029539|102029866 hsa-miR-922 0 0 1
chr14:102029539|102029866 hsa-miR-1276 0 1 1
chr14:102029539|102029866 hsa-miR-548p 0 0 1
chr14:102029539|102029866 hsa-miR-423-3p 0 0 1
chr14:102029539|102029866 hsa-miR-1224-5p 0 0 1
chr14:102029539|102029866 hsa-miR-574-5p 0 0 1
chr14:102029539|102029866 hsa-miR-331-5p 0 0 1
chr14:102029539|102029866 hsa-miR-513a-5p 0 0 1
chr14:102029539|102029866 hsa-miR-34c-3p 0 0 1
chr14:102029539|102029866 hsa-miR-16 0 0 1
chr14:102029539|102029866 hsa-miR-220c 0 0 1
chr14:102029539|102029866 hsa-miR-378 0 0 1
chr14:102029539|102029866 hsa-miR-544 0 0 1
chr14:102029539|102029866 hsa-miR-24 0 0 1
chr14:102029539|102029866 hsa-miR-196a 0 0 1
chr14:102029539|102029866 hsa-miR-1185 0 0 1
chr14:102029539|102029866 hsa-miR-602 0 1 0
chr14:102029539|102029866 hsa-miR-611 1 0 0
chr14:102029539|102029866 hsa-miR-762 1 0 0
chr14:102029539|102029866 hsa-miR-764 1 1 0
chr14:102029539|102029866 hsa-miR-920 1 0 0
chr14:102029539|102029866 hsa-miR-3132 1 0 0
chr14:102029539|102029866 hsa-miR-3164 0 1 0
chr14:102029539|102029866 hsa-miR-3170 1 0 0
chr14:102029539|102029866 hsa-miR-3193 0 1 0
chr14:102029539|102029866 hsa-miR-378c 0 1 0
chr14:102029539|102029866 hsa-miR-4322 1 1 0
chr14:102029539|102029866 hsa-miR-4265 1 1 0
chr14:102029539|102029866 hsa-miR-4269 0 1 0
chr14:102029539|102029866 hsa-miR-4270 1 0 0
chr14:102029539|102029866 hsa-miR-3665 1 0 0
chr14:102029539|102029866 hsa-miR-3945 1 0 0
chr14:102029539|102029866 hsa-miR-378e 0 1 0
chr14:102029539|102029866 hsa-miR-4430 1 0 0
chr14:102029539|102029866 hsa-miR-4437 1 1 0
chr14:102029539|102029866 hsa-miR-4440 1 0 0
chr14:102029539|102029866 hsa-miR-378h 0 1 0
chr14:102029539|102029866 hsa-miR-3135b 1 1 0
chr14:102029539|102029866 hsa-miR-4476 1 1 0
chr14:102029539|102029866 hsa-miR-4487 1 0 0
chr14:102029539|102029866 hsa-miR-4511 0 1 0
chr14:102029539|102029866 hsa-miR-3972 0 1 0
chr14:102029539|102029866 hsa-miR-4656 1 0 0
chr14:102029539|102029866 hsa-miR-4658 0 1 0
chr14:102029539|102029866 hsa-miR-4688 1 1 0
chr14:102029539|102029866 hsa-miR-4705 0 1 0
chr14:102029539|102029866 hsa-miR-4739 1 0 0
chr14:102029539|102029866 hsa-miR-4751 1 1 0
chr14:102029539|102029866 hsa-miR-5698 1 0 0
chr14:102029539|102029866 hsa-miR-6090 1 0 0
chr14:102029539|102029866 hsa-miR-8058 0 1 0
chr14:102029539|102029866 hsa-miR-8077 1 0 0
chr14:102029539|102029866 hsa-miR-12129 0 1 0
chr14:102029539|102029866 hsa-miR-17-3p 0 1 0
chr14:102029539|102029866 hsa-miR-6765-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6894-5p 1 1 0
chr14:102029539|102029866 hsa-miR-6820-5p 0 1 0
chr14:102029539|102029866 hsa-miR-6759-5p 1 0 0
chr14:102029539|102029866 hsa-miR-3187-3p 0 1 0
chr14:102029539|102029866 hsa-miR-6849-3p 0 1 0
chr14:102029539|102029866 hsa-miR-1288-3p 1 0 0
chr14:102029539|102029866 hsa-miR-6742-5p 1 0 0
chr14:102029539|102029866 hsa-miR-3605-5p 1 1 0
chr14:102029539|102029866 hsa-miR-491-5p 1 1 0
chr14:102029539|102029866 hsa-miR-3151-5p 1 1 0
chr14:102029539|102029866 hsa-miR-6772-5p 1 0 0
chr14:102029539|102029866 hsa-miR-31-3p 0 1 0
chr14:102029539|102029866 hsa-miR-2467-3p 1 0 0
chr14:102029539|102029866 hsa-miR-6821-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6788-3p 0 1 0
chr14:102029539|102029866 hsa-miR-6884-3p 0 1 0
chr14:102029539|102029866 hsa-miR-615-5p 1 0 0
chr14:102029539|102029866 hsa-miR-5088-5p 1 1 0
chr14:102029539|102029866 hsa-miR-1226-5p 1 0 0
chr14:102029539|102029866 hsa-miR-1229-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6753-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4650-3p 0 1 0
chr14:102029539|102029866 hsa-miR-4787-5p 1 0 0
chr14:102029539|102029866 hsa-miR-1266-3p 0 1 0
chr14:102029539|102029866 hsa-miR-6789-5p 1 0 0
chr14:102029539|102029866 hsa-miR-3925-5p 1 0 0
chr14:102029539|102029866 hsa-miR-3158-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4776-5p 1 0 0
chr14:102029539|102029866 hsa-miR-664b-5p 1 0 0
chr14:102029539|102029866 hsa-miR-7846-3p 0 1 0
chr14:102029539|102029866 hsa-miR-1251-3p 0 1 0
chr14:102029539|102029866 hsa-miR-4529-5p 0 1 0
chr14:102029539|102029866 hsa-miR-6795-3p 0 1 0
chr14:102029539|102029866 hsa-miR-1296-3p 1 0 0
chr14:102029539|102029866 hsa-miR-4283 1 1 0
chr14:102029539|102029866 hsa-miR-6802-3p 0 1 0
chr14:102029539|102029866 hsa-miR-3664-3p 0 1 0
chr14:102029539|102029866 hsa-miR-4520-5p 1 1 0
chr14:102029539|102029866 hsa-miR-6865-5p 0 1 0
chr14:102029539|102029866 hsa-miR-5001-5p 1 1 0
chr14:102029539|102029866 hsa-miR-6726-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6743-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6756-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6803-5p 1 0 0
chr14:102029539|102029866 hsa-miR-10401-5p 1 0 0
chr14:102029539|102029866 hsa-miR-10396a-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4632-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4649-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4745-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6729-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6846-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6858-5p 1 0 0
chr14:102029539|102029866 hsa-miR-4697-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6831-5p 1 0 0
chr14:102029539|102029866 hsa-miR-939-5p 1 0 0
chr14:102029539|102029866 hsa-miR-6855-5p 1 0 0
chr14:102029539|102029866 hsa-miR-3679-5p 1 1 0
chr14:102029539|102029866 hsa-miR-6876-5p 0 1 0
chr14:102029539|102029866 hsa-miR-378a-3p 0 1 0
chr14:102029539|102029866 hsa-miR-6790-5p 1 1 0
chr14:102029539|102029866 hsa-miR-5009-5p 0 1 0
chr14:102029539|102029866 hsa-miR-6715b-5p 0 1 0
chr14:102029539|102029866 hsa-miR-6838-5p 0 1 0
chr14:102029539|102029866 hsa-miR-378d 0 1 0
chr14:102029539|102029866 hsa-miR-4999-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:102029539|102029866
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MALYPQVTTQFFYLKSKAHTQRRETCRNYMERGPHCSSLP
Nucleotide Sequence TTGGCTCTTTATCCTCAAGTCACGACGCAGTTCTTCTACCTAAAGAGCAAAGCCCACACTCAGAGACGAGAAACATGCAGAAATTATATGGAAAGGGGTCCTCACTGCAGCTCACTCCCGTGA
CircID chr14:102029539|102029866
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MVDCLFDLPEPHVQVHLLLLQLAPLLVEQVGIVIDEVQVVARGDGHRSAASLC
Nucleotide Sequence CTGGTCGACTGTCTCTTTGATCTTCCTGAGCCCCACGTTCAAGTGCATCTGCTGCTCCTCCAGCTCGCTCCGCTTCTCGTGGAACAGGTTGGCATAGTGATTGATGAAGTCCAGGTAGTGGCGAGGGGTGATGGCCATCGTTCTGCCGCCTCGCTTTGCTAG
CircID chr14:102029539|102029866
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MIFLSPTFKCICCSSSSLRFSWNRLA
Nucleotide Sequence TTGATCTTCCTGAGCCCCACGTTCAAGTGCATCTGCTGCTCCTCCAGCTCGCTCCGCTTCTCGTGGAACAGGTTGGCATAG
CircID chr14:102029539|102029866
ORF Type ORF4
Protein Length 87
Nucleotide Length 264
Protein Sequence MAITPRHYLDFINHYANLFHEKRSELEEQQMHLNVGLRKIKETVDQVRHRHKFLTGVSCSEDPFPYNFCMFLVSECGLCSLGRRTAS
Nucleotide Sequence ATGGCCATCACCCCTCGCCACTACCTGGACTTCATCAATCACTATGCCAACCTGTTCCACGAGAAGCGGAGCGAGCTGGAGGAGCAGCAGATGCACTTGAACGTGGGGCTCAGGAAGATCAAAGAGACAGTCGACCAGGTGCGTCACAGGCACAAATTCCTCACGGGAGTGAGCTGCAGTGAGGACCCCTTTCCATATAATTTCTGCATGTTTCTCGTCTCTGAGTGTGGGCTTTGCTCTTTAGGTAGAAGAACTGCGTCGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab