CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102040245|102040365
Strand -
CircType exon
Host Gene ENSG00000197102.9;
Algorism CIRI2;
Sequence CTACGATGCAGAATTCCAGCACTTCTTGAGAGGAAATGAGATTGTCCTGAGTGCTGGCTCCACCCCCAGGATCCAGGGCCTGACTGTGGAGCAGGCGGAGGCGGTGGTGAGGCTGAGCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102040245|102040365 hsa-miR-197-5p 0 0 1
chr14:102040245|102040365 hsa-miR-197-3p 0 0 1
chr14:102040245|102040365 hsa-miR-216a-5p 0 0 1
chr14:102040245|102040365 hsa-miR-216a-3p 0 0 1
chr14:102040245|102040365 hsa-miR-302a-5p 0 0 1
chr14:102040245|102040365 hsa-miR-302a-3p 0 0 1
chr14:102040245|102040365 hsa-miR-302b-5p 0 0 1
chr14:102040245|102040365 hsa-miR-302b-3p 0 0 1
chr14:102040245|102040365 hsa-miR-302c-5p 0 0 1
chr14:102040245|102040365 hsa-miR-302c-3p 0 0 1
chr14:102040245|102040365 hsa-miR-302d-5p 0 0 1
chr14:102040245|102040365 hsa-miR-302d-3p 0 0 1
chr14:102040245|102040365 hsa-miR-372-5p 0 0 1
chr14:102040245|102040365 hsa-miR-372-3p 0 0 1
chr14:102040245|102040365 hsa-miR-373-5p 0 0 1
chr14:102040245|102040365 hsa-miR-373-3p 0 0 1
chr14:102040245|102040365 hsa-miR-520e-5p 0 0 1
chr14:102040245|102040365 hsa-miR-520e-3p 0 0 1
chr14:102040245|102040365 hsa-miR-520b-5p 0 0 1
chr14:102040245|102040365 hsa-miR-520b-3p 0 0 1
chr14:102040245|102040365 hsa-miR-510-5p 0 0 1
chr14:102040245|102040365 hsa-miR-510-3p 0 0 1
chr14:102040245|102040365 hsa-miR-608 0 1 1
chr14:102040245|102040365 hsa-miR-637 0 0 1
chr14:102040245|102040365 hsa-miR-1238-5p 0 0 1
chr14:102040245|102040365 hsa-miR-1238-3p 0 0 1
chr14:102040245|102040365 hsa-miR-1287-5p 0 0 1
chr14:102040245|102040365 hsa-miR-1287-3p 0 0 1
chr14:102040245|102040365 hsa-miR-1291 0 0 1
chr14:102040245|102040365 hsa-miR-302e 0 0 1
chr14:102040245|102040365 hsa-miR-1281 0 1 1
chr14:102040245|102040365 hsa-miR-513c-5p 0 0 1
chr14:102040245|102040365 hsa-miR-513c-3p 0 0 1
chr14:102040245|102040365 hsa-miR-512-3p 0 0 1
chr14:102040245|102040365 hsa-miR-520d-3p 0 0 1
chr14:102040245|102040365 hsa-miR-520a-3p 0 0 1
chr14:102040245|102040365 hsa-miR-520c-3p 0 0 1
chr14:102040245|102040365 hsa-miR-220b 0 0 1
chr14:102040245|102040365 hsa-miR-544 0 0 1
chr14:102040245|102040365 hsa-miR-650 1 0 0
chr14:102040245|102040365 hsa-miR-760 0 1 0
chr14:102040245|102040365 hsa-miR-1299 0 1 0
chr14:102040245|102040365 hsa-miR-4665-3p 1 0 0
chr14:102040245|102040365 hsa-miR-6836-3p 0 1 0
chr14:102040245|102040365 hsa-miR-6854-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6880-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6788-3p 0 1 0
chr14:102040245|102040365 hsa-miR-1343-3p 0 1 0
chr14:102040245|102040365 hsa-miR-4787-5p 0 1 0
chr14:102040245|102040365 hsa-miR-3065-3p 1 0 0
chr14:102040245|102040365 hsa-miR-1229-3p 1 1 0
chr14:102040245|102040365 hsa-miR-4485-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6752-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6803-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6842-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6751-5p 0 1 0
chr14:102040245|102040365 hsa-miR-6754-3p 1 1 0
chr14:102040245|102040365 hsa-miR-6511a-3p 1 1 0
chr14:102040245|102040365 hsa-miR-10401-3p 1 0 0
chr14:102040245|102040365 hsa-miR-6511b-3p 1 1 0
chr14:102040245|102040365 hsa-miR-6827-3p 0 1 0
chr14:102040245|102040365 hsa-miR-514b-5p 0 1 0
chr14:102040245|102040365 hsa-miR-4712-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:102040245|102040365
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MRGNEIVLSAGSTPRIQGLTVEQAEAVVRLSC
Nucleotide Sequence TTGAGAGGAAATGAGATTGTCCTGAGTGCTGGCTCCACCCCCAGGATCCAGGGCCTGACTGTGGAGCAGGCGGAGGCGGTGGTGAGGCTGAGCTGC
CircID chr14:102040245|102040365
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MLHSQALDPGGGASTQDNLISSQEVLEFCIV
Nucleotide Sequence CTGCTCCACAGTCAGGCCCTGGATCCTGGGGGTGGAGCCAGCACTCAGGACAATCTCATTTCCTCTCAAGAAGTGCTGGAATTCTGCATCGTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab