CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102194938|102197847
Strand +
CircType exon
Host Gene ENSG00000140153.17;
Algorism find_circ;CIRI2;DCC;
Sequence GCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAATATGACTTTTCTACCAAGTGGAAAAGATAAGAACTCTTGTCAGCACTTGTGGAAGGTGGATTGGAATGAAGAAAGACAGAATGAAGGTAGCAAGACCAGTGAGGAGGCTCTAGTAACTGTCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102194938|102197847 hsa-miR-21-5p 0 0 1
chr14:102194938|102197847 hsa-miR-21-3p 0 0 1
chr14:102194938|102197847 hsa-miR-198 0 0 1
chr14:102194938|102197847 hsa-miR-206 0 0 1
chr14:102194938|102197847 hsa-miR-381-5p 0 0 1
chr14:102194938|102197847 hsa-miR-381-3p 0 0 1
chr14:102194938|102197847 hsa-miR-325 0 1 1
chr14:102194938|102197847 hsa-miR-493-5p 0 0 1
chr14:102194938|102197847 hsa-miR-493-3p 0 0 1
chr14:102194938|102197847 hsa-miR-577 0 0 1
chr14:102194938|102197847 hsa-miR-593-5p 0 0 1
chr14:102194938|102197847 hsa-miR-593-3p 0 0 1
chr14:102194938|102197847 hsa-miR-613 0 0 1
chr14:102194938|102197847 hsa-miR-617 0 0 1
chr14:102194938|102197847 hsa-miR-802 0 0 1
chr14:102194938|102197847 hsa-miR-300 0 0 1
chr14:102194938|102197847 hsa-miR-922 0 0 1
chr14:102194938|102197847 hsa-miR-548p 0 0 1
chr14:102194938|102197847 hsa-miR-628-3p 0 0 1
chr14:102194938|102197847 hsa-miR-628-5p 0 0 1
chr14:102194938|102197847 hsa-miR-524-5p 0 0 1
chr14:102194938|102197847 hsa-miR-590-5p 0 0 1
chr14:102194938|102197847 hsa-miR-520d-5p 0 1 1
chr14:102194938|102197847 hsa-miR-1 0 0 1
chr14:102194938|102197847 hsa-miR-765 1 0 0
chr14:102194938|102197847 hsa-miR-3163 1 0 0
chr14:102194938|102197847 hsa-miR-3689c 1 0 0
chr14:102194938|102197847 hsa-miR-4507 1 0 0
chr14:102194938|102197847 hsa-miR-4657 1 0 0
chr14:102194938|102197847 hsa-miR-4739 1 0 0
chr14:102194938|102197847 hsa-miR-5191 1 0 0
chr14:102194938|102197847 hsa-miR-5192 1 0 0
chr14:102194938|102197847 hsa-miR-6086 1 0 0
chr14:102194938|102197847 hsa-miR-6088 1 0 0
chr14:102194938|102197847 hsa-miR-6133 1 0 0
chr14:102194938|102197847 hsa-miR-6165 1 1 0
chr14:102194938|102197847 hsa-miR-9718 0 1 0
chr14:102194938|102197847 hsa-miR-12114 1 1 0
chr14:102194938|102197847 hsa-miR-12120 0 1 0
chr14:102194938|102197847 hsa-miR-12127 1 0 0
chr14:102194938|102197847 hsa-miR-7106-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6825-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6894-5p 1 0 0
chr14:102194938|102197847 hsa-miR-1972 1 1 0
chr14:102194938|102197847 hsa-miR-6822-3p 0 1 0
chr14:102194938|102197847 hsa-miR-766-3p 1 0 0
chr14:102194938|102197847 hsa-miR-6799-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6728-5p 1 0 0
chr14:102194938|102197847 hsa-miR-8071 1 0 0
chr14:102194938|102197847 hsa-miR-6833-5p 1 1 0
chr14:102194938|102197847 hsa-miR-5187-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6515-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6880-5p 1 0 0
chr14:102194938|102197847 hsa-miR-7847-3p 1 0 0
chr14:102194938|102197847 hsa-miR-6744-5p 1 0 0
chr14:102194938|102197847 hsa-miR-4709-3p 1 0 0
chr14:102194938|102197847 hsa-miR-6730-5p 1 0 0
chr14:102194938|102197847 hsa-miR-7110-3p 0 1 0
chr14:102194938|102197847 hsa-miR-6748-5p 1 0 0
chr14:102194938|102197847 hsa-miR-3190-3p 1 1 0
chr14:102194938|102197847 hsa-miR-2467-5p 0 1 0
chr14:102194938|102197847 hsa-miR-1224-5p 1 0 0
chr14:102194938|102197847 hsa-miR-30b-3p 1 0 0
chr14:102194938|102197847 hsa-miR-1226-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6740-5p 1 0 0
chr14:102194938|102197847 hsa-miR-1283 0 1 0
chr14:102194938|102197847 hsa-miR-4691-3p 0 1 0
chr14:102194938|102197847 hsa-miR-3127-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6878-5p 1 0 0
chr14:102194938|102197847 hsa-miR-3065-3p 1 0 0
chr14:102194938|102197847 hsa-miR-24-1-5p 0 1 0
chr14:102194938|102197847 hsa-miR-6895-3p 0 1 0
chr14:102194938|102197847 hsa-miR-2277-5p 1 0 0
chr14:102194938|102197847 hsa-miR-676-5p 0 1 0
chr14:102194938|102197847 hsa-miR-4802-5p 0 1 0
chr14:102194938|102197847 hsa-miR-1233-5p 1 0 0
chr14:102194938|102197847 hsa-miR-3689b-3p 1 0 0
chr14:102194938|102197847 hsa-miR-6769b-5p 1 1 0
chr14:102194938|102197847 hsa-miR-6778-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6865-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6726-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6769a-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6815-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6851-5p 1 0 0
chr14:102194938|102197847 hsa-miR-1249-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6779-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6780a-5p 1 0 0
chr14:102194938|102197847 hsa-miR-7111-5p 1 0 0
chr14:102194938|102197847 hsa-miR-4728-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6780b-5p 1 0 0
chr14:102194938|102197847 hsa-miR-3689a-3p 1 0 0
chr14:102194938|102197847 hsa-miR-6858-5p 1 1 0
chr14:102194938|102197847 hsa-miR-6883-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6831-5p 1 0 0
chr14:102194938|102197847 hsa-miR-4769-5p 1 0 0
chr14:102194938|102197847 hsa-miR-3679-5p 0 1 0
chr14:102194938|102197847 hsa-miR-6811-5p 1 0 0
chr14:102194938|102197847 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:102194938|102197847
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MRNMTFLPSGKDKNSCQHLWKVDWNEERQNEGSKTSEEALVTVQ
Nucleotide Sequence ATGAGGAATATGACTTTTCTACCAAGTGGAAAAGATAAGAACTCTTGTCAGCACTTGTGGAAGGTGGATTGGAATGAAGAAAGACAGAATGAAGGTAGCAAGACCAGTGAGGAGGCTCTAGTAACTGTCCAG

CircID chr14:102194938|102197847
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence LSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEEYDFSTKWKR*
Nucleotide Sequence TTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAATATGACTTTTCTACCAAGTGGAAAAGATAA

CircID chr14:102194938|102197847
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MSFFIPIHLPQVLTRVFLIKKFASFFFDWVYKLDLACGKAH
Nucleotide Sequence CTGTCTTTCTTCATTCCAATCCACCTTCCACAAGTGCTGACAAGAGTTTTCCTCATTAAAAAGTTTGCTAGTTTCTTTTTTGATTGGGTCTATAAGCTGGACTTGGCCTGCGGAAAAGCCCACTAG

CircID chr14:102194938|102197847
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MLVSFLIGSISWTWPAEKPTRRETLSAVAVRWLKS
Nucleotide Sequence TTGCTAGTTTCTTTTTTGATTGGGTCTATAAGCTGGACTTGGCCTGCGGAAAAGCCCACTAGGAGAGAGACACTTTCTGCTGTGGCTGTTAGGTGGTTGAAGTCATGA

CircID chr14:102194938|102197847
ORF Type ORF3
Protein Length 89
Nucleotide Length 267
Protein Sequence MSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEENSCQHLWKVDWNEERQNEGSKTSEEALVTVQ
Nucleotide Sequence TTGAGTAAACCAATAGATAAAAGGATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAAAACTCTTGTCAGCACTTGTGGAAGGTGGATTGGAATGAAGAAAGACAGAATGAAGGTAGCAAGACCAGTGAGGAGGCTCTAGTAACTGTCCAG

CircID chr14:102194938|102197847
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MRKTLVSTCGRWIGMKKDRMKVARPVRRL
Nucleotide Sequence ATGAGGAAAACTCTTGTCAGCACTTGTGGAAGGTGGATTGGAATGAAGAAAGACAGAATGAAGGTAGCAAGACCAGTGAGGAGGCTCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:102194938|102197847 U2AF2 9 1 2
chr14:102194938|102197847 MOV10 0 1 0
chr14:102194938|102197847 ELAVL1 2 9 1
chr14:102194938|102197847 SF3B1 0 2 0
chr14:102194938|102197847 PRPF8 0 2 0
chr14:102194938|102197847 TAF15 1 0 0
chr14:102194938|102197847 FUS 2 0 0
chr14:102194938|102197847 GNL3 0 1 0
chr14:102194938|102197847 SRSF1 0 1 0
chr14:102194938|102197847 NOP58 1 1 1
chr14:102194938|102197847 U2AF1 3 0 0
chr14:102194938|102197847 NOP56 2 3 1
chr14:102194938|102197847 DDX54 0 1 1
chr14:102194938|102197847 HNRNPM 0 1 0
chr14:102194938|102197847 SF3A3 0 1 0
chr14:102194938|102197847 PTBP1 1 0 0
chr14:102194938|102197847 HNRNPC 10 12 1
chr14:102194938|102197847 ZC3H7B 0 0 1
chr14:102194938|102197847 SMNDC1 0 1 0
chr14:102194938|102197847 AUH 0 1 0
chr14:102194938|102197847 LIN28B 1 0 0
chr14:102194938|102197847 IGF2BP1 1 0 0
chr14:102194938|102197847 IGF2BP2 2 2 2
chr14:102194938|102197847 TARDBP 1 1 0
chr14:102194938|102197847 RBFOX2 1 2 0
chr14:102194938|102197847 RBM47 0 0 1
chr14:102194938|102197847 CSTF2T 1 0 0
chr14:102194938|102197847 CSTF2 0 1 0
chr14:102194938|102197847 AGO1 1 0 0
chr14:102194938|102197847 EIF4A3 0 0 1
chr14:102194938|102197847 FBL 2 2 1