CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102440471|102440593
Strand -
CircType exon
Host Gene ENSG00000196663.14;
Algorism CIRI2;
Sequence CGGGCTTTTGCTTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGACACGGCCTGGATCATCAGGACCAGTGGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102440471|102440593 hsa-miR-141-5p 0 0 1
chr14:102440471|102440593 hsa-miR-141-3p 0 0 1
chr14:102440471|102440593 hsa-miR-126-5p 0 0 1
chr14:102440471|102440593 hsa-miR-126-3p 0 0 1
chr14:102440471|102440593 hsa-miR-200a-5p 0 0 1
chr14:102440471|102440593 hsa-miR-200a-3p 0 0 1
chr14:102440471|102440593 hsa-miR-640 0 1 1
chr14:102440471|102440593 hsa-miR-661 0 1 1
chr14:102440471|102440593 hsa-miR-1266-5p 0 0 1
chr14:102440471|102440593 hsa-miR-1266-3p 0 0 1
chr14:102440471|102440593 hsa-miR-548p 0 0 1
chr14:102440471|102440593 hsa-miR-1825 0 1 1
chr14:102440471|102440593 hsa-miR-486-3p 0 1 1
chr14:102440471|102440593 hsa-miR-188-3p 0 1 1
chr14:102440471|102440593 hsa-miR-1207-5p 0 0 1
chr14:102440471|102440593 hsa-miR-1260 0 0 1
chr14:102440471|102440593 hsa-miR-1254 0 0 1
chr14:102440471|102440593 hsa-miR-371-3p 0 0 1
chr14:102440471|102440593 hsa-miR-3918 0 1 0
chr14:102440471|102440593 hsa-miR-4502 0 1 0
chr14:102440471|102440593 hsa-miR-4518 0 1 0
chr14:102440471|102440593 hsa-miR-4780 0 1 0
chr14:102440471|102440593 hsa-miR-152-5p 0 1 0
chr14:102440471|102440593 hsa-miR-136-5p 0 1 0
chr14:102440471|102440593 hsa-miR-6721-5p 0 1 0
chr14:102440471|102440593 hsa-miR-3934-3p 0 1 0
chr14:102440471|102440593 hsa-miR-7112-5p 1 0 0
chr14:102440471|102440593 hsa-miR-6895-5p 0 1 0
chr14:102440471|102440593 hsa-miR-7152-3p 0 1 0
chr14:102440471|102440593 hsa-miR-3158-3p 0 1 0
chr14:102440471|102440593 hsa-miR-371a-3p 0 1 0
chr14:102440471|102440593 hsa-miR-4763-3p 0 1 0
chr14:102440471|102440593 hsa-miR-6816-5p 1 0 0
chr14:102440471|102440593 hsa-miR-6743-5p 1 0 0
chr14:102440471|102440593 hsa-miR-6762-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:102440471|102440593
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MLVGKSPSRGSGTGTKPCPRQCLWP
Nucleotide Sequence TTGCTTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGA

CircID chr14:102440471|102440593
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MWESHHQGEAALVRSPAPGSVCGPER
Nucleotide Sequence TTGTGGGAAAGTCACCATCAAGGGGAAGCGGCACTGGTACGAAGCCCTGCCCCAGGCAGTGTTTGTGGCCCTGAGCGATGA

CircID chr14:102440471|102440593
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MVLMIQAVSSLRATNTAWGRASYQCRFPLMVTFPQAKA
Nucleotide Sequence CTGGTCCTGATGATCCAGGCCGTGTCATCGCTCAGGGCCACAAACACTGCCTGGGGCAGGGCTTCGTACCAGTGCCGCTTCCCCTTGATGGTGACTTTCCCACAAGCAAAAGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites