CircRNA Information

General Information
circRNA Basic Information
CircID chr14:102498878|102499053
Strand -
CircType exon
Host Gene ENSG00000196663.14;
Algorism CIRI2;
Sequence CTCACCTCACACCACAGCACACCTCACCACACCACACCGCACTGCACCATACCTCACCACATCTCACCACACCACAGCACACCTCACCACACAACACACCACACCCCACACCGCACTGCACCGCACCGCACCGCACCGTACCTCGCCACATCTCACCACACCACACCACACCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:102498878|102499053 hsa-let-7b-5p 0 0 1
chr14:102498878|102499053 hsa-let-7b-3p 0 0 1
chr14:102498878|102499053 hsa-let-7c-5p 0 0 1
chr14:102498878|102499053 hsa-let-7c-3p 0 0 1
chr14:102498878|102499053 hsa-let-7d-5p 0 0 1
chr14:102498878|102499053 hsa-let-7d-3p 0 0 1
chr14:102498878|102499053 hsa-let-7e-5p 0 0 1
chr14:102498878|102499053 hsa-let-7e-3p 0 0 1
chr14:102498878|102499053 hsa-miR-98-5p 0 0 1
chr14:102498878|102499053 hsa-miR-98-3p 0 0 1
chr14:102498878|102499053 hsa-let-7g-5p 0 0 1
chr14:102498878|102499053 hsa-let-7g-3p 0 0 1
chr14:102498878|102499053 hsa-let-7i-5p 0 0 1
chr14:102498878|102499053 hsa-let-7i-3p 0 0 1
chr14:102498878|102499053 hsa-miR-143-5p 0 0 1
chr14:102498878|102499053 hsa-miR-143-3p 0 0 1
chr14:102498878|102499053 hsa-miR-202-5p 0 0 1
chr14:102498878|102499053 hsa-miR-202-3p 0 0 1
chr14:102498878|102499053 hsa-miR-608 1 0 1
chr14:102498878|102499053 hsa-miR-675-5p 0 0 1
chr14:102498878|102499053 hsa-miR-675-3p 0 0 1
chr14:102498878|102499053 hsa-miR-1294 1 0 1
chr14:102498878|102499053 hsa-miR-491-5p 1 0 1
chr14:102498878|102499053 hsa-miR-576-3p 0 0 1
chr14:102498878|102499053 hsa-miR-342-5p 1 0 1
chr14:102498878|102499053 hsa-miR-644 0 0 1
chr14:102498878|102499053 hsa-let-7a 0 0 1
chr14:102498878|102499053 hsa-let-7f 0 0 1
chr14:102498878|102499053 hsa-miR-147 0 0 1
chr14:102498878|102499053 hsa-miR-595 1 1 0
chr14:102498878|102499053 hsa-miR-663a 1 0 0
chr14:102498878|102499053 hsa-miR-1265 1 0 0
chr14:102498878|102499053 hsa-miR-1268a 1 0 0
chr14:102498878|102499053 hsa-miR-4316 1 0 0
chr14:102498878|102499053 hsa-miR-3650 1 0 0
chr14:102498878|102499053 hsa-miR-3659 1 0 0
chr14:102498878|102499053 hsa-miR-3911 1 0 0
chr14:102498878|102499053 hsa-miR-1268b 1 0 0
chr14:102498878|102499053 hsa-miR-4440 1 0 0
chr14:102498878|102499053 hsa-miR-4447 1 0 0
chr14:102498878|102499053 hsa-miR-4455 1 1 0
chr14:102498878|102499053 hsa-miR-4466 1 1 0
chr14:102498878|102499053 hsa-miR-3689c 0 1 0
chr14:102498878|102499053 hsa-miR-4519 1 0 0
chr14:102498878|102499053 hsa-miR-4525 1 0 0
chr14:102498878|102499053 hsa-miR-4651 1 0 0
chr14:102498878|102499053 hsa-miR-4654 0 1 0
chr14:102498878|102499053 hsa-miR-4657 1 0 0
chr14:102498878|102499053 hsa-miR-4710 1 1 0
chr14:102498878|102499053 hsa-miR-4748 1 0 0
chr14:102498878|102499053 hsa-miR-5090 1 0 0
chr14:102498878|102499053 hsa-miR-5572 1 0 0
chr14:102498878|102499053 hsa-miR-6081 1 0 0
chr14:102498878|102499053 hsa-miR-6088 1 0 0
chr14:102498878|102499053 hsa-miR-6134 1 0 0
chr14:102498878|102499053 hsa-miR-6863 1 0 0
chr14:102498878|102499053 hsa-miR-8072 1 0 0
chr14:102498878|102499053 hsa-miR-4433b-3p 1 0 0
chr14:102498878|102499053 hsa-miR-92a-2-5p 1 0 0
chr14:102498878|102499053 hsa-miR-122-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6747-5p 1 1 0
chr14:102498878|102499053 hsa-miR-3150a-3p 1 0 0
chr14:102498878|102499053 hsa-miR-6825-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6799-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6728-5p 1 0 0
chr14:102498878|102499053 hsa-miR-3934-5p 1 0 0
chr14:102498878|102499053 hsa-miR-7114-5p 1 0 0
chr14:102498878|102499053 hsa-miR-7160-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6890-5p 1 0 0
chr14:102498878|102499053 hsa-miR-4474-3p 1 0 0
chr14:102498878|102499053 hsa-miR-6759-5p 1 0 0
chr14:102498878|102499053 hsa-miR-512-3p 1 0 0
chr14:102498878|102499053 hsa-miR-7108-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6742-5p 1 0 0
chr14:102498878|102499053 hsa-miR-3151-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6772-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6796-5p 1 1 0
chr14:102498878|102499053 hsa-miR-6782-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6821-5p 1 0 0
chr14:102498878|102499053 hsa-miR-7855-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6786-5p 1 0 0
chr14:102498878|102499053 hsa-miR-1908-5p 1 0 0
chr14:102498878|102499053 hsa-miR-7854-3p 1 0 0
chr14:102498878|102499053 hsa-miR-1225-5p 1 0 0
chr14:102498878|102499053 hsa-miR-4746-3p 1 1 0
chr14:102498878|102499053 hsa-miR-3689b-3p 0 1 0
chr14:102498878|102499053 hsa-miR-6778-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6787-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6812-5p 1 1 0
chr14:102498878|102499053 hsa-miR-6816-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6737-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6752-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6756-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6819-5p 1 0 0
chr14:102498878|102499053 hsa-miR-7110-5p 1 0 0
chr14:102498878|102499053 hsa-miR-10401-5p 1 1 0
chr14:102498878|102499053 hsa-miR-6763-5p 1 0 0
chr14:102498878|102499053 hsa-miR-10396b-5p 1 0 0
chr14:102498878|102499053 hsa-miR-3689a-3p 0 1 0
chr14:102498878|102499053 hsa-miR-4649-5p 1 0 0
chr14:102498878|102499053 hsa-miR-6729-5p 1 0 0
chr14:102498878|102499053 hsa-miR-4769-5p 1 1 0
chr14:102498878|102499053 hsa-miR-6855-5p 1 0 0
chr14:102498878|102499053 hsa-miR-4472 1 0 0
chr14:102498878|102499053 hsa-miR-3689d 1 0 0
chr14:102498878|102499053 hsa-miR-769-3p 1 0 0
chr14:102498878|102499053 hsa-miR-6506-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:102498878|102499053
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MHHTSPHLTTPQHTSPHNTPHPTPHCTAPHRTVPRHISPHHTTPH
Nucleotide Sequence CTGCACCATACCTCACCACATCTCACCACACCACAGCACACCTCACCACACAACACACCACACCCCACACCGCACTGCACCGCACCGCACCGCACCGTACCTCGCCACATCTCACCACACCACACCACACCACAC
CircID chr14:102498878|102499053
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MWRGTVRCGAVQCGVGCGVLCGEVCCGVVRCGEVWCSAVWCGEVCCGVR
Nucleotide Sequence ATGTGGCGAGGTACGGTGCGGTGCGGTGCGGTGCAGTGCGGTGTGGGGTGTGGTGTGTTGTGTGGTGAGGTGTGCTGTGGTGTGGTGAGATGTGGTGAGGTATGGTGCAGTGCGGTGTGGTGTGGTGAGGTGTGCTGTGGTGTGAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab