CircRNA Information

General Information
circRNA Basic Information
CircID chr14:103136076|103136213
Strand +
CircType exon
Host Gene ENSG00000185215.7;
Algorism CIRI2;
Sequence AGTGAGAGGTCAAGCTTGCCCTGCCCCTGCCCAGACCTCAGCCAGACTTCTGGGTGGCAGGGCCCACGGTGGCACCCCCAGGGCCTGTCCCTGCCTTGGGGAAGGGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:103136076|103136213 hsa-miR-192-5p 0 0 1
chr14:103136076|103136213 hsa-miR-192-3p 0 0 1
chr14:103136076|103136213 hsa-miR-215-5p 0 0 1
chr14:103136076|103136213 hsa-miR-215-3p 0 0 1
chr14:103136076|103136213 hsa-miR-149-5p 0 0 1
chr14:103136076|103136213 hsa-miR-149-3p 0 0 1
chr14:103136076|103136213 hsa-miR-484 0 1 1
chr14:103136076|103136213 hsa-miR-612 0 1 1
chr14:103136076|103136213 hsa-miR-637 0 1 1
chr14:103136076|103136213 hsa-miR-940 0 0 1
chr14:103136076|103136213 hsa-miR-1227-5p 0 0 1
chr14:103136076|103136213 hsa-miR-1227-3p 0 0 1
chr14:103136076|103136213 hsa-miR-1291 0 1 1
chr14:103136076|103136213 hsa-miR-1266-5p 0 0 1
chr14:103136076|103136213 hsa-miR-1266-3p 0 0 1
chr14:103136076|103136213 hsa-miR-296-5p 0 0 1
chr14:103136076|103136213 hsa-miR-486-3p 0 0 1
chr14:103136076|103136213 hsa-miR-1207-5p 0 1 1
chr14:103136076|103136213 hsa-miR-342-5p 0 1 1
chr14:103136076|103136213 hsa-miR-1285 0 0 1
chr14:103136076|103136213 hsa-miR-555 0 1 0
chr14:103136076|103136213 hsa-miR-622 0 1 0
chr14:103136076|103136213 hsa-miR-663a 1 0 0
chr14:103136076|103136213 hsa-miR-762 1 0 0
chr14:103136076|103136213 hsa-miR-760 1 0 0
chr14:103136076|103136213 hsa-miR-1538 1 0 0
chr14:103136076|103136213 hsa-miR-2861 1 0 0
chr14:103136076|103136213 hsa-miR-3155a 1 0 0
chr14:103136076|103136213 hsa-miR-3909 0 1 0
chr14:103136076|103136213 hsa-miR-4688 0 1 0
chr14:103136076|103136213 hsa-miR-4706 1 0 0
chr14:103136076|103136213 hsa-miR-6860 1 1 0
chr14:103136076|103136213 hsa-miR-211-3p 0 1 0
chr14:103136076|103136213 hsa-miR-4747-3p 1 0 0
chr14:103136076|103136213 hsa-miR-6840-3p 0 1 0
chr14:103136076|103136213 hsa-miR-1972 1 0 0
chr14:103136076|103136213 hsa-miR-769-5p 0 1 0
chr14:103136076|103136213 hsa-miR-7160-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6721-5p 0 1 0
chr14:103136076|103136213 hsa-miR-874-3p 1 0 0
chr14:103136076|103136213 hsa-miR-7845-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6798-5p 1 1 0
chr14:103136076|103136213 hsa-miR-5008-5p 1 0 0
chr14:103136076|103136213 hsa-miR-1343-3p 0 1 0
chr14:103136076|103136213 hsa-miR-939-3p 1 0 0
chr14:103136076|103136213 hsa-miR-1229-5p 0 1 0
chr14:103136076|103136213 hsa-miR-4715-3p 0 1 0
chr14:103136076|103136213 hsa-miR-1228-5p 1 1 0
chr14:103136076|103136213 hsa-miR-3677-3p 0 1 0
chr14:103136076|103136213 hsa-miR-7111-3p 1 1 0
chr14:103136076|103136213 hsa-miR-6742-3p 0 1 0
chr14:103136076|103136213 hsa-miR-339-5p 0 1 0
chr14:103136076|103136213 hsa-miR-7112-5p 1 0 0
chr14:103136076|103136213 hsa-miR-6752-3p 0 1 0
chr14:103136076|103136213 hsa-miR-4763-3p 1 1 0
chr14:103136076|103136213 hsa-miR-6787-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6816-5p 1 1 0
chr14:103136076|103136213 hsa-miR-6893-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6743-5p 1 1 0
chr14:103136076|103136213 hsa-miR-6803-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6722-3p 0 1 0
chr14:103136076|103136213 hsa-miR-6751-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6808-5p 1 1 0
chr14:103136076|103136213 hsa-miR-6879-5p 0 1 0
chr14:103136076|103136213 hsa-miR-3127-3p 0 1 0
chr14:103136076|103136213 hsa-miR-6852-3p 0 1 0
chr14:103136076|103136213 hsa-miR-5189-5p 0 1 0
chr14:103136076|103136213 hsa-miR-1909-3p 1 1 0
chr14:103136076|103136213 hsa-miR-4749-5p 1 1 0
chr14:103136076|103136213 hsa-miR-3187-5p 0 1 0
chr14:103136076|103136213 hsa-miR-3085-5p 0 1 0
chr14:103136076|103136213 hsa-miR-7843-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6724-5p 1 0 0
chr14:103136076|103136213 hsa-miR-10398-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6791-5p 0 1 0
chr14:103136076|103136213 hsa-miR-6727-3p 0 1 0
chr14:103136076|103136213 hsa-miR-6756-3p 0 1 0
chr14:103136076|103136213 hsa-miR-6775-3p 1 1 0
chr14:103136076|103136213 hsa-miR-4723-3p 1 0 0
chr14:103136076|103136213 hsa-miR-6783-3p 0 1 0
chr14:103136076|103136213 hsa-miR-7155-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:103136076|103136213
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MPCPCPDLSQTSGWQGPRWHPQGLSLPWGRGSLRGPRRSWA
Nucleotide Sequence TTGCCCTGCCCCTGCCCAGACCTCAGCCAGACTTCTGGGTGGCAGGGCCCACGGTGGCACCCCCAGGGCCTGTCCCTGCCTTGGGGAAGGGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGCC
CircID chr14:103136076|103136213
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPLPRPQPDFWVAGPTVAPPGPVPALGKGEPERTQEVLG
Nucleotide Sequence CTGCCCCTGCCCAGACCTCAGCCAGACTTCTGGGTGGCAGGGCCCACGGTGGCACCCCCAGGGCCTGTCCCTGCCTTGGGGAAGGGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGC
CircID chr14:103136076|103136213
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MGPLRLPLPQGRDRPWGCHRGPCHPEVWLRSGQGQGKLDLS
Nucleotide Sequence CTGGGTCCTCTCAGGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGGGGTGCCACCGTGGGCCCTGCCACCCAGAAGTCTGGCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab