CircRNA Information

General Information
circRNA Basic Information
CircID chr14:103520014|103520287
Strand -
CircType exon
Host Gene ENSG00000166165.11;
Algorism CIRI2;
Sequence CCCGCCCACCGCAGCCGTGTCCACACCGCCTGTGCCTCGCTTCTGAAGTCGCAGCCGCTTAAGCACCTCCGAGAACTTCTCATGCTTGCCCAGGTTGGGCAGCTTGATATGCACACCTGCCCGCAGCCCGGTGCCCAGGTTGGATGGGCAGGTGAGGATGTAGCCCAGGTGAGGGTTCCACATGAACTCATAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:103520014|103520287 hsa-miR-22-5p 0 0 1
chr14:103520014|103520287 hsa-miR-22-3p 0 0 1
chr14:103520014|103520287 hsa-miR-221-5p 0 0 1
chr14:103520014|103520287 hsa-miR-221-3p 0 0 1
chr14:103520014|103520287 hsa-miR-222-5p 0 0 1
chr14:103520014|103520287 hsa-miR-222-3p 0 0 1
chr14:103520014|103520287 hsa-miR-448 0 0 1
chr14:103520014|103520287 hsa-miR-604 0 1 1
chr14:103520014|103520287 hsa-miR-612 0 1 1
chr14:103520014|103520287 hsa-miR-541-5p 0 0 1
chr14:103520014|103520287 hsa-miR-541-3p 0 0 1
chr14:103520014|103520287 hsa-miR-1206 0 0 1
chr14:103520014|103520287 hsa-miR-1253 0 0 1
chr14:103520014|103520287 hsa-miR-490-3p 0 1 1
chr14:103520014|103520287 hsa-miR-654-5p 0 0 1
chr14:103520014|103520287 hsa-miR-1300 0 0 1
chr14:103520014|103520287 hsa-miR-1285 0 0 1
chr14:103520014|103520287 hsa-miR-602 1 0 0
chr14:103520014|103520287 hsa-miR-639 1 0 0
chr14:103520014|103520287 hsa-miR-661 0 1 0
chr14:103520014|103520287 hsa-miR-3138 1 1 0
chr14:103520014|103520287 hsa-miR-3147 1 0 0
chr14:103520014|103520287 hsa-miR-3197 1 0 0
chr14:103520014|103520287 hsa-miR-4322 1 0 0
chr14:103520014|103520287 hsa-miR-3665 1 0 0
chr14:103520014|103520287 hsa-miR-3911 1 1 0
chr14:103520014|103520287 hsa-miR-3917 1 0 0
chr14:103520014|103520287 hsa-miR-3937 1 1 0
chr14:103520014|103520287 hsa-miR-4462 0 1 0
chr14:103520014|103520287 hsa-miR-4535 1 0 0
chr14:103520014|103520287 hsa-miR-3960 1 0 0
chr14:103520014|103520287 hsa-miR-4656 1 0 0
chr14:103520014|103520287 hsa-miR-4657 0 1 0
chr14:103520014|103520287 hsa-miR-4675 1 0 0
chr14:103520014|103520287 hsa-miR-4692 0 1 0
chr14:103520014|103520287 hsa-miR-4734 0 1 0
chr14:103520014|103520287 hsa-miR-6860 1 1 0
chr14:103520014|103520287 hsa-miR-150-3p 1 0 0
chr14:103520014|103520287 hsa-miR-6765-5p 1 0 0
chr14:103520014|103520287 hsa-miR-4687-3p 1 0 0
chr14:103520014|103520287 hsa-miR-6799-5p 1 0 0
chr14:103520014|103520287 hsa-miR-7851-3p 0 1 0
chr14:103520014|103520287 hsa-miR-3934-5p 0 1 0
chr14:103520014|103520287 hsa-miR-6727-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6721-5p 0 1 0
chr14:103520014|103520287 hsa-miR-6829-5p 0 1 0
chr14:103520014|103520287 hsa-miR-2467-3p 1 0 0
chr14:103520014|103520287 hsa-miR-6850-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6786-5p 1 0 0
chr14:103520014|103520287 hsa-miR-939-3p 0 1 0
chr14:103520014|103520287 hsa-miR-1226-5p 1 0 0
chr14:103520014|103520287 hsa-miR-4763-5p 0 1 0
chr14:103520014|103520287 hsa-miR-92b-5p 1 0 0
chr14:103520014|103520287 hsa-miR-4787-5p 1 0 0
chr14:103520014|103520287 hsa-miR-4638-3p 1 1 0
chr14:103520014|103520287 hsa-miR-5196-3p 0 1 0
chr14:103520014|103520287 hsa-miR-7850-5p 1 0 0
chr14:103520014|103520287 hsa-miR-7112-5p 0 1 0
chr14:103520014|103520287 hsa-miR-339-3p 1 0 0
chr14:103520014|103520287 hsa-miR-6770-3p 1 0 0
chr14:103520014|103520287 hsa-miR-1298-3p 0 1 0
chr14:103520014|103520287 hsa-miR-10400-5p 1 0 0
chr14:103520014|103520287 hsa-miR-4763-3p 1 0 0
chr14:103520014|103520287 hsa-miR-6775-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6752-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6813-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6851-5p 0 1 0
chr14:103520014|103520287 hsa-miR-10401-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6808-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6754-3p 0 1 0
chr14:103520014|103520287 hsa-miR-5189-5p 1 1 0
chr14:103520014|103520287 hsa-miR-4649-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6729-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6848-5p 1 0 0
chr14:103520014|103520287 hsa-miR-3187-5p 1 1 0
chr14:103520014|103520287 hsa-miR-4723-5p 1 0 0
chr14:103520014|103520287 hsa-miR-939-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6511b-5p 1 0 0
chr14:103520014|103520287 hsa-miR-1285-3p 0 1 0
chr14:103520014|103520287 hsa-miR-6849-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6724-5p 1 0 0
chr14:103520014|103520287 hsa-miR-6891-3p 0 1 0
chr14:103520014|103520287 hsa-miR-412-3p 0 1 0
chr14:103520014|103520287 hsa-miR-10399-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:103520014|103520287
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MKSQPLKHLRELLMLAQVGQLDMHTCPQPGAQVGWAGEDVAQVRVPHELIV
Nucleotide Sequence CTGAAGTCGCAGCCGCTTAAGCACCTCCGAGAACTTCTCATGCTTGCCCAGGTTGGGCAGCTTGATATGCACACCTGCCCGCAGCCCGGTGCCCAGGTTGGATGGGCAGGTGAGGATGTAGCCCAGGTGAGGGTTCCACATGAACTCATAGTC
CircID chr14:103520014|103520287
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MPRLGSLICTPARSPVPRLDGQVRM
Nucleotide Sequence TTGCCCAGGTTGGGCAGCTTGATATGCACACCTGCCCGCAGCCCGGTGCCCAGGTTGGATGGGCAGGTGAGGATGTAG
CircID chr14:103520014|103520287
ORF Type ORF3
Protein Length 61
Nucleotide Length 183
Protein Sequence MWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKRGTGGVDTAAVGG
Nucleotide Sequence ATGTGGAACCCTCACCTGGGCTACATCCTCACCTGCCCATCCAACCTGGGCACCGGGCTGCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTCGGAGGTGCTTAAGCGGCTGCGACTTCAGAAGCGAGGCACAGGCGGTGTGGACACGGCTGCGGTGGGCGGG
CircID chr14:103520014|103520287
ORF Type ORF4
Protein Length 63
Nucleotide Length 189
Protein Sequence MSSCGTLTWATSSPAHPTWAPGCGQVCISSCPTWASMRSSRRCLSGCDFRSEAQAVWTRLRWA
Nucleotide Sequence ATGAGTTCATGTGGAACCCTCACCTGGGCTACATCCTCACCTGCCCATCCAACCTGGGCACCGGGCTGCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTCGGAGGTGCTTAAGCGGCTGCGACTTCAGAAGCGAGGCACAGGCGGTGTGGACACGGCTGCGGTGGGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab