CircRNA Information

General Information
circRNA Basic Information
CircID chr14:104713445|104713606
Strand +
CircType exon
Host Gene ENSG00000203485.11;
Algorism CIRI2;
Sequence CAGGCTCTGTGGCTCTTGGGGGATCCATGGAGGCTGCCTTGCTGCCCCCGTCGGTGTCCCCGCGGCCCCGGGCTGTCTTCCGCAGCTGGAAGCCCTTCCTGATGTCAGCCAGCAGGGCATCGATGACACACACCTCCTCCTGCTTCCCGGGCCCCTTCCTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:104713445|104713606 hsa-miR-370-5p 0 0 1
chr14:104713445|104713606 hsa-miR-370-3p 0 0 1
chr14:104713445|104713606 hsa-miR-335-5p 0 0 1
chr14:104713445|104713606 hsa-miR-335-3p 0 0 1
chr14:104713445|104713606 hsa-miR-489-5p 0 0 1
chr14:104713445|104713606 hsa-miR-489-3p 0 0 1
chr14:104713445|104713606 hsa-miR-592 0 1 1
chr14:104713445|104713606 hsa-miR-597-5p 0 0 1
chr14:104713445|104713606 hsa-miR-597-3p 0 0 1
chr14:104713445|104713606 hsa-miR-765 0 0 1
chr14:104713445|104713606 hsa-miR-874-5p 0 0 1
chr14:104713445|104713606 hsa-miR-874-3p 0 0 1
chr14:104713445|104713606 hsa-miR-873-5p 0 0 1
chr14:104713445|104713606 hsa-miR-873-3p 0 0 1
chr14:104713445|104713606 hsa-miR-486-3p 0 0 1
chr14:104713445|104713606 hsa-miR-146b-3p 0 0 1
chr14:104713445|104713606 hsa-miR-361-3p 0 0 1
chr14:104713445|104713606 hsa-miR-490-5p 0 1 1
chr14:104713445|104713606 hsa-miR-7 0 0 1
chr14:104713445|104713606 hsa-miR-638 1 0 0
chr14:104713445|104713606 hsa-miR-663a 1 0 0
chr14:104713445|104713606 hsa-miR-762 1 0 0
chr14:104713445|104713606 hsa-miR-665 1 0 0
chr14:104713445|104713606 hsa-miR-1538 1 1 0
chr14:104713445|104713606 hsa-miR-2861 1 0 0
chr14:104713445|104713606 hsa-miR-3141 1 0 0
chr14:104713445|104713606 hsa-miR-3154 1 0 0
chr14:104713445|104713606 hsa-miR-3196 1 0 0
chr14:104713445|104713606 hsa-miR-4270 1 0 0
chr14:104713445|104713606 hsa-miR-4281 1 0 0
chr14:104713445|104713606 hsa-miR-3651 0 1 0
chr14:104713445|104713606 hsa-miR-3714 0 1 0
chr14:104713445|104713606 hsa-miR-1268b 1 0 0
chr14:104713445|104713606 hsa-miR-4449 1 0 0
chr14:104713445|104713606 hsa-miR-4466 1 0 0
chr14:104713445|104713606 hsa-miR-4476 0 1 0
chr14:104713445|104713606 hsa-miR-4525 1 0 0
chr14:104713445|104713606 hsa-miR-4526 1 0 0
chr14:104713445|104713606 hsa-miR-4533 1 0 0
chr14:104713445|104713606 hsa-miR-4669 1 0 0
chr14:104713445|104713606 hsa-miR-4674 1 0 0
chr14:104713445|104713606 hsa-miR-4706 0 1 0
chr14:104713445|104713606 hsa-miR-4721 1 0 0
chr14:104713445|104713606 hsa-miR-4734 1 1 0
chr14:104713445|104713606 hsa-miR-4739 1 0 0
chr14:104713445|104713606 hsa-miR-5787 1 0 0
chr14:104713445|104713606 hsa-miR-6081 1 0 0
chr14:104713445|104713606 hsa-miR-6085 1 1 0
chr14:104713445|104713606 hsa-miR-6133 1 0 0
chr14:104713445|104713606 hsa-miR-6165 1 1 0
chr14:104713445|104713606 hsa-miR-8089 1 0 0
chr14:104713445|104713606 hsa-miR-12114 1 0 0
chr14:104713445|104713606 hsa-miR-12128 0 1 0
chr14:104713445|104713606 hsa-miR-128-1-5p 0 1 0
chr14:104713445|104713606 hsa-miR-4433a-3p 1 0 0
chr14:104713445|104713606 hsa-miR-671-5p 1 0 0
chr14:104713445|104713606 hsa-miR-7106-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6825-5p 1 1 0
chr14:104713445|104713606 hsa-miR-6720-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6799-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6510-5p 1 0 0
chr14:104713445|104713606 hsa-miR-3692-5p 0 1 0
chr14:104713445|104713606 hsa-miR-6089 1 0 0
chr14:104713445|104713606 hsa-miR-6746-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4722-5p 1 1 0
chr14:104713445|104713606 hsa-miR-6727-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6721-5p 1 0 0
chr14:104713445|104713606 hsa-miR-1292-5p 1 0 0
chr14:104713445|104713606 hsa-miR-503-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6732-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6798-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6810-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6850-5p 1 1 0
chr14:104713445|104713606 hsa-miR-6852-5p 0 1 0
chr14:104713445|104713606 hsa-miR-6784-5p 0 1 0
chr14:104713445|104713606 hsa-miR-4640-5p 1 0 0
chr14:104713445|104713606 hsa-miR-1908-5p 0 1 0
chr14:104713445|104713606 hsa-miR-6771-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4690-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6749-5p 1 0 0
chr14:104713445|104713606 hsa-miR-3648 1 1 0
chr14:104713445|104713606 hsa-miR-4787-5p 1 1 0
chr14:104713445|104713606 hsa-miR-149-3p 1 0 0
chr14:104713445|104713606 hsa-miR-6828-5p 1 1 0
chr14:104713445|104713606 hsa-miR-4708-3p 0 1 0
chr14:104713445|104713606 hsa-miR-3158-3p 1 1 0
chr14:104713445|104713606 hsa-miR-6719-3p 0 1 0
chr14:104713445|104713606 hsa-miR-6792-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4763-3p 1 0 0
chr14:104713445|104713606 hsa-miR-6787-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6893-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6775-5p 1 0 0
chr14:104713445|104713606 hsa-miR-1343-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6726-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6743-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6754-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6756-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6813-5p 1 0 0
chr14:104713445|104713606 hsa-miR-7107-5p 1 0 0
chr14:104713445|104713606 hsa-miR-11181-3p 1 1 0
chr14:104713445|104713606 hsa-miR-1249-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6722-3p 1 0 0
chr14:104713445|104713606 hsa-miR-6779-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6780a-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6808-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6875-5p 1 0 0
chr14:104713445|104713606 hsa-miR-7111-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4728-5p 1 0 0
chr14:104713445|104713606 hsa-miR-5196-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6780b-5p 1 0 0
chr14:104713445|104713606 hsa-miR-10396b-5p 1 0 0
chr14:104713445|104713606 hsa-miR-1909-3p 1 0 0
chr14:104713445|104713606 hsa-miR-328-5p 1 1 0
chr14:104713445|104713606 hsa-miR-4749-5p 1 1 0
chr14:104713445|104713606 hsa-miR-6777-5p 1 1 0
chr14:104713445|104713606 hsa-miR-6848-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6858-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4697-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6885-5p 1 0 0
chr14:104713445|104713606 hsa-miR-939-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6511a-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6799-3p 0 1 0
chr14:104713445|104713606 hsa-miR-7843-5p 0 1 0
chr14:104713445|104713606 hsa-miR-1914-3p 1 0 0
chr14:104713445|104713606 hsa-miR-4646-5p 1 1 0
chr14:104713445|104713606 hsa-miR-4747-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6876-5p 0 1 0
chr14:104713445|104713606 hsa-miR-6891-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6785-5p 1 0 0
chr14:104713445|104713606 hsa-miR-4667-5p 0 1 0
chr14:104713445|104713606 hsa-miR-3689d 0 1 0
chr14:104713445|104713606 hsa-miR-6724-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6791-5p 1 0 0
chr14:104713445|104713606 hsa-miR-6762-5p 1 0 0
chr14:104713445|104713606 hsa-miR-128-2-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:104713445|104713606
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MWLLGDPWRLPCCPRRCPRGPGLSSAAGSPS
Nucleotide Sequence CTGTGGCTCTTGGGGGATCCATGGAGGCTGCCTTGCTGCCCCCGTCGGTGTCCCCGCGGCCCCGGGCTGTCTTCCGCAGCTGGAAGCCCTTCCTGA
CircID chr14:104713445|104713606
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MEALPDVSQQGIDDTHLLLLPGPLP
Nucleotide Sequence CTGGAAGCCCTTCCTGATGTCAGCCAGCAGGGCATCGATGACACACACCTCCTCCTGCTTCCCGGGCCCCTTCCT
CircID chr14:104713445|104713606
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MEAALLPPSVSPRPRAVFRSWKPFLMSASRASMTHTSSCFPGPFL
Nucleotide Sequence ATGGAGGCTGCCTTGCTGCCCCCGTCGGTGTCCCCGCGGCCCCGGGCTGTCTTCCGCAGCTGGAAGCCCTTCCTGATGTCAGCCAGCAGGGCATCGATGACACACACCTCCTCCTGCTTCCCGGGCCCCTTCCTG
CircID chr14:104713445|104713606
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MPCWLTSGRASSCGRQPGAAGTPTGAARQPPWIPQEPQSL
Nucleotide Sequence ATGCCCTGCTGGCTGACATCAGGAAGGGCTTCCAGCTGCGGAAGACAGCCCGGGGCCGCGGGGACACCGACGGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCACAGAGCCTG
CircID chr14:104713445|104713606
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MLADIRKGFQLRKTARGRGDTDGGSKAASMDPPRATEP
Nucleotide Sequence CTGCTGGCTGACATCAGGAAGGGCTTCCAGCTGCGGAAGACAGCCCGGGGCCGCGGGGACACCGACGGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCACAGAGCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab