CircRNA Information

General Information
circRNA Basic Information
CircID chr14:104773017|104773304
Strand -
CircType exon
Host Gene ENSG00000142208.14;
Algorism CIRI2;
Sequence CGCACATCATCTCGTACATGACCACGCCCAGCCCCCACCAGTCCACTGCACGGCCGTAGTCATTGTCCTCCAGCACCTGCACGGGTGGCAGATGGGCAGGACTCGGCATCAAGGGGTGTCCGGGACACTGCCGGGGGAGGTGTGACGTGCTTGGGGCACAGAGAGGACACAGCATTGCGTGTGCTCAGGACGTGGGGACGCAGCAACGCGTATGCACGCAGGTGGGGCGCACACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:104773017|104773304 hsa-miR-34a-5p 0 0 1
chr14:104773017|104773304 hsa-miR-34a-3p 0 0 1
chr14:104773017|104773304 hsa-miR-143-5p 0 0 1
chr14:104773017|104773304 hsa-miR-143-3p 0 0 1
chr14:104773017|104773304 hsa-miR-449a 0 0 1
chr14:104773017|104773304 hsa-miR-517-5p 0 0 1
chr14:104773017|104773304 hsa-miR-517b-3p 0 0 1
chr14:104773017|104773304 hsa-miR-585-5p 0 0 1
chr14:104773017|104773304 hsa-miR-585-3p 0 0 1
chr14:104773017|104773304 hsa-miR-619-5p 0 0 1
chr14:104773017|104773304 hsa-miR-619-3p 0 0 1
chr14:104773017|104773304 hsa-miR-662 0 1 1
chr14:104773017|104773304 hsa-miR-449b-5p 0 0 1
chr14:104773017|104773304 hsa-miR-449b-3p 0 0 1
chr14:104773017|104773304 hsa-miR-657 0 0 1
chr14:104773017|104773304 hsa-miR-765 0 0 1
chr14:104773017|104773304 hsa-miR-541-5p 0 0 1
chr14:104773017|104773304 hsa-miR-541-3p 0 0 1
chr14:104773017|104773304 hsa-miR-933 0 0 1
chr14:104773017|104773304 hsa-miR-1227-5p 0 0 1
chr14:104773017|104773304 hsa-miR-1227-3p 0 0 1
chr14:104773017|104773304 hsa-miR-1228-5p 0 0 1
chr14:104773017|104773304 hsa-miR-1228-3p 0 0 1
chr14:104773017|104773304 hsa-miR-1200 0 1 1
chr14:104773017|104773304 hsa-miR-1287-5p 0 0 1
chr14:104773017|104773304 hsa-miR-1287-3p 0 0 1
chr14:104773017|104773304 hsa-miR-1288-5p 0 0 1
chr14:104773017|104773304 hsa-miR-1288-3p 0 0 1
chr14:104773017|104773304 hsa-miR-654-5p 1 0 1
chr14:104773017|104773304 hsa-miR-1224-3p 0 0 1
chr14:104773017|104773304 hsa-miR-34c-5p 0 0 1
chr14:104773017|104773304 hsa-miR-1269 0 0 1
chr14:104773017|104773304 hsa-miR-1268 0 0 1
chr14:104773017|104773304 hsa-miR-450a 0 0 1
chr14:104773017|104773304 hsa-miR-220a 0 0 1
chr14:104773017|104773304 hsa-miR-637 1 0 0
chr14:104773017|104773304 hsa-miR-663a 1 0 0
chr14:104773017|104773304 hsa-miR-762 1 1 0
chr14:104773017|104773304 hsa-miR-892a 1 1 0
chr14:104773017|104773304 hsa-miR-1293 1 0 0
chr14:104773017|104773304 hsa-miR-1268a 1 1 0
chr14:104773017|104773304 hsa-miR-1275 1 0 0
chr14:104773017|104773304 hsa-miR-2861 1 0 0
chr14:104773017|104773304 hsa-miR-3147 1 0 0
chr14:104773017|104773304 hsa-miR-4322 1 0 0
chr14:104773017|104773304 hsa-miR-3665 1 1 0
chr14:104773017|104773304 hsa-miR-3909 1 1 0
chr14:104773017|104773304 hsa-miR-1268b 1 1 0
chr14:104773017|104773304 hsa-miR-4447 1 1 0
chr14:104773017|104773304 hsa-miR-3135b 1 1 0
chr14:104773017|104773304 hsa-miR-4466 1 0 0
chr14:104773017|104773304 hsa-miR-4481 1 0 0
chr14:104773017|104773304 hsa-miR-4488 1 0 0
chr14:104773017|104773304 hsa-miR-4492 1 1 0
chr14:104773017|104773304 hsa-miR-4498 1 1 0
chr14:104773017|104773304 hsa-miR-4505 1 1 0
chr14:104773017|104773304 hsa-miR-4507 1 0 0
chr14:104773017|104773304 hsa-miR-4508 1 0 0
chr14:104773017|104773304 hsa-miR-4525 1 0 0
chr14:104773017|104773304 hsa-miR-1587 1 0 0
chr14:104773017|104773304 hsa-miR-4651 1 0 0
chr14:104773017|104773304 hsa-miR-4710 1 0 0
chr14:104773017|104773304 hsa-miR-4741 1 0 0
chr14:104773017|104773304 hsa-miR-4767 1 0 0
chr14:104773017|104773304 hsa-miR-4780 0 1 0
chr14:104773017|104773304 hsa-miR-5787 1 0 0
chr14:104773017|104773304 hsa-miR-6085 1 0 0
chr14:104773017|104773304 hsa-miR-6086 1 0 0
chr14:104773017|104773304 hsa-miR-6860 1 0 0
chr14:104773017|104773304 hsa-miR-7704 1 0 0
chr14:104773017|104773304 hsa-miR-12115 1 0 0
chr14:104773017|104773304 hsa-miR-92a-1-5p 1 0 0
chr14:104773017|104773304 hsa-miR-4731-5p 1 1 0
chr14:104773017|104773304 hsa-miR-6747-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6894-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6857-5p 1 0 0
chr14:104773017|104773304 hsa-miR-4687-3p 1 0 0
chr14:104773017|104773304 hsa-miR-8071 1 1 0
chr14:104773017|104773304 hsa-miR-6880-5p 1 0 0
chr14:104773017|104773304 hsa-miR-3064-5p 1 0 0
chr14:104773017|104773304 hsa-miR-7154-3p 0 1 0
chr14:104773017|104773304 hsa-miR-6840-5p 0 1 0
chr14:104773017|104773304 hsa-miR-6741-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6721-5p 1 0 0
chr14:104773017|104773304 hsa-miR-3189-5p 1 0 0
chr14:104773017|104773304 hsa-miR-5589-5p 1 1 0
chr14:104773017|104773304 hsa-miR-4728-3p 1 1 0
chr14:104773017|104773304 hsa-miR-6817-3p 0 1 0
chr14:104773017|104773304 hsa-miR-3151-5p 1 0 0
chr14:104773017|104773304 hsa-miR-185-3p 1 1 0
chr14:104773017|104773304 hsa-miR-6829-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6740-3p 1 0 0
chr14:104773017|104773304 hsa-miR-6786-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6835-5p 1 0 0
chr14:104773017|104773304 hsa-miR-1226-5p 1 0 0
chr14:104773017|104773304 hsa-miR-4715-3p 0 1 0
chr14:104773017|104773304 hsa-miR-296-3p 1 0 0
chr14:104773017|104773304 hsa-miR-3191-5p 1 0 0
chr14:104773017|104773304 hsa-miR-485-5p 1 0 0
chr14:104773017|104773304 hsa-miR-7111-3p 1 1 0
chr14:104773017|104773304 hsa-miR-4638-3p 1 0 0
chr14:104773017|104773304 hsa-miR-4446-3p 1 0 0
chr14:104773017|104773304 hsa-miR-6802-5p 1 0 0
chr14:104773017|104773304 hsa-miR-1306-5p 0 1 0
chr14:104773017|104773304 hsa-miR-6786-3p 1 1 0
chr14:104773017|104773304 hsa-miR-1225-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6889-3p 1 1 0
chr14:104773017|104773304 hsa-miR-4758-3p 1 1 0
chr14:104773017|104773304 hsa-miR-597-3p 1 0 0
chr14:104773017|104773304 hsa-miR-4746-3p 1 0 0
chr14:104773017|104773304 hsa-miR-4749-3p 1 0 0
chr14:104773017|104773304 hsa-miR-4433a-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6838-3p 0 1 0
chr14:104773017|104773304 hsa-miR-6800-3p 1 1 0
chr14:104773017|104773304 hsa-miR-6733-3p 0 1 0
chr14:104773017|104773304 hsa-miR-18b-3p 1 0 0
chr14:104773017|104773304 hsa-miR-1233-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6769b-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6787-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6816-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6870-5p 1 0 0
chr14:104773017|104773304 hsa-miR-5001-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6726-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6756-5p 1 1 0
chr14:104773017|104773304 hsa-miR-6803-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6813-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6842-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6751-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6852-3p 0 1 0
chr14:104773017|104773304 hsa-miR-3620-5p 1 1 0
chr14:104773017|104773304 hsa-miR-5189-5p 1 0 0
chr14:104773017|104773304 hsa-miR-1237-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6729-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6794-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6795-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6846-5p 1 1 0
chr14:104773017|104773304 hsa-miR-6848-5p 1 1 0
chr14:104773017|104773304 hsa-miR-4697-5p 1 0 0
chr14:104773017|104773304 hsa-miR-3085-5p 1 1 0
chr14:104773017|104773304 hsa-miR-3940-5p 1 0 0
chr14:104773017|104773304 hsa-miR-5008-3p 0 1 0
chr14:104773017|104773304 hsa-miR-4665-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6855-5p 1 0 0
chr14:104773017|104773304 hsa-miR-4472 1 0 0
chr14:104773017|104773304 hsa-miR-6790-5p 1 0 0
chr14:104773017|104773304 hsa-miR-6849-5p 1 0 0
chr14:104773017|104773304 hsa-miR-3059-5p 1 0 0
chr14:104773017|104773304 hsa-miR-3622a-3p 0 1 0
chr14:104773017|104773304 hsa-miR-4723-3p 1 1 0
chr14:104773017|104773304 hsa-miR-6769b-3p 0 1 0
chr14:104773017|104773304 hsa-miR-10394-5p 0 1 0
chr14:104773017|104773304 hsa-miR-4768-5p 0 1 0
chr14:104773017|104773304 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:104773017|104773304
ORF Type ORF1
Protein Length 81
Nucleotide Length 243
Protein Sequence MHGRSHCPPAPARVADGQDSASRGVRDTAGGGVTCLGHREDTALRVLRTWGRSNAYARRWGAHLGGQVLRCAAKGLHGGTV
Nucleotide Sequence CTGCACGGCCGTAGTCATTGTCCTCCAGCACCTGCACGGGTGGCAGATGGGCAGGACTCGGCATCAAGGGGTGTCCGGGACACTGCCGGGGGAGGTGTGACGTGCTTGGGGCACAGAGAGGACACAGCATTGCGTGTGCTCAGGACGTGGGGACGCAGCAACGCGTATGCACGCAGGTGGGGCGCACACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCGTC
CircID chr14:104773017|104773304
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MHAGGAHTSGARYSGVPQKVFMVAP
Nucleotide Sequence ATGCACGCAGGTGGGGCGCACACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCG
CircID chr14:104773017|104773304
ORF Type ORF3
Protein Length 75
Nucleotide Length 225
Protein Sequence MSSSTCTGGRWAGLGIKGCPGHCRGRCDVLGAQRGHSIACAQDVGTQQRVCTQVGRTPRGPGTQVCRKRSSWWHR
Nucleotide Sequence TTGTCCTCCAGCACCTGCACGGGTGGCAGATGGGCAGGACTCGGCATCAAGGGGTGTCCGGGACACTGCCGGGGGAGGTGTGACGTGCTTGGGGCACAGAGAGGACACAGCATTGCGTGTGCTCAGGACGTGGGGACGCAGCAACGCGTATGCACGCAGGTGGGGCGCACACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCGT
CircID chr14:104773017|104773304
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MKTFCGTPEYLAPEVCAPPACIRVAASPRPEHTQCCVLSVPQARHTSPGSVPDTP
Nucleotide Sequence ATGAAGACCTTTTGCGGCACACCTGAGTACCTGGCCCCCGAGGTGTGCGCCCCACCTGCGTGCATACGCGTTGCTGCGTCCCCACGTCCTGAGCACACGCAATGCTGTGTCCTCTCTGTGCCCCAAGCACGTCACACCTCCCCCGGCAGTGTCCCGGACACCCCTTGA
CircID chr14:104773017|104773304
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MPICHPCRCWRTMTTAVQWTGGGWAWSCTR
Nucleotide Sequence CTGCCCATCTGCCACCCGTGCAGGTGCTGGAGGACAATGACTACGGCCGTGCAGTGGACTGGTGGGGGCTGGGCGTGGTCATGTACGAGATGA
CircID chr14:104773017|104773304
ORF Type ORF6
Protein Length 64
Nucleotide Length 195
Protein Sequence MSTWPPRCAPHLRAYALLRPHVLSTRNAVSSLCPKHVTPPPAVSRTPLDAESCPSATRAGAGGQ
Nucleotide Sequence CTGAGTACCTGGCCCCCGAGGTGTGCGCCCCACCTGCGTGCATACGCGTTGCTGCGTCCCCACGTCCTGAGCACACGCAATGCTGTGTCCTCTCTGTGCCCCAAGCACGTCACACCTCCCCCGGCAGTGTCCCGGACACCCCTTGATGCCGAGTCCTGCCCATCTGCCACCCGTGCAGGTGCTGGAGGACAATGA
CircID chr14:104773017|104773304
ORF Type ORF7
Protein Length 58
Nucleotide Length 174
Protein Sequence MLCPLCAPSTSHLPRQCPGHPLMPSPAHLPPVQVLEDNDYGRAVDWWGLGVVMYEMMC
Nucleotide Sequence ATGCTGTGTCCTCTCTGTGCCCCAAGCACGTCACACCTCCCCCGGCAGTGTCCCGGACACCCCTTGATGCCGAGTCCTGCCCATCTGCCACCCGTGCAGGTGCTGGAGGACAATGACTACGGCCGTGCAGTGGACTGGTGGGGGCTGGGCGTGGTCATGTACGAGATGATGTGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab