CircRNA Information

General Information
circRNA Basic Information
CircID chr14:104773068|104773478
Strand -
CircType exon
Host Gene ENSG00000142208.14;
Algorism CIRI2;
Sequence GGCCGTAGTCATTGTCCTCCAGCACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCGTCCTTGATCCCCTCCTTGCACAGCCCGAAGTCTGTGATCTTAATGTGCCCGTCCTTGTCCAGCATGAGGTTCTCCAGCTAGGGGAAAGGTGGCCTCAGGTCAGTGCCGCCAGGCCCCCAGGGCCCTGCCCCCCTGCCTGCCCGCCAGCGCACCTTGAGGTCCCGGTACACCACGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:104773068|104773478 hsa-miR-18a-5p 0 0 1
chr14:104773068|104773478 hsa-miR-18a-3p 0 0 1
chr14:104773068|104773478 hsa-miR-19a-5p 0 0 1
chr14:104773068|104773478 hsa-miR-19a-3p 0 0 1
chr14:104773068|104773478 hsa-miR-18b-5p 0 0 1
chr14:104773068|104773478 hsa-miR-18b-3p 0 0 1
chr14:104773068|104773478 hsa-miR-589-5p 0 0 1
chr14:104773068|104773478 hsa-miR-589-3p 0 0 1
chr14:104773068|104773478 hsa-miR-619-5p 0 0 1
chr14:104773068|104773478 hsa-miR-619-3p 0 0 1
chr14:104773068|104773478 hsa-miR-631 0 0 1
chr14:104773068|104773478 hsa-miR-637 1 1 1
chr14:104773068|104773478 hsa-miR-765 0 0 1
chr14:104773068|104773478 hsa-miR-940 1 0 1
chr14:104773068|104773478 hsa-miR-1227-5p 0 0 1
chr14:104773068|104773478 hsa-miR-1227-3p 0 0 1
chr14:104773068|104773478 hsa-miR-1228-5p 0 0 1
chr14:104773068|104773478 hsa-miR-1228-3p 0 0 1
chr14:104773068|104773478 hsa-miR-1287-5p 0 0 1
chr14:104773068|104773478 hsa-miR-1287-3p 0 0 1
chr14:104773068|104773478 hsa-miR-1291 0 0 1
chr14:104773068|104773478 hsa-miR-486-3p 0 0 1
chr14:104773068|104773478 hsa-miR-1207-5p 1 1 1
chr14:104773068|104773478 hsa-miR-19b 0 0 1
chr14:104773068|104773478 hsa-miR-450a 0 0 1
chr14:104773068|104773478 hsa-miR-663 0 0 1
chr14:104773068|104773478 hsa-miR-608 1 0 0
chr14:104773068|104773478 hsa-miR-638 1 1 0
chr14:104773068|104773478 hsa-miR-661 0 1 0
chr14:104773068|104773478 hsa-miR-663a 1 0 0
chr14:104773068|104773478 hsa-miR-762 1 0 0
chr14:104773068|104773478 hsa-miR-2861 1 1 0
chr14:104773068|104773478 hsa-miR-378b 1 0 0
chr14:104773068|104773478 hsa-miR-544b 0 1 0
chr14:104773068|104773478 hsa-miR-3141 1 0 0
chr14:104773068|104773478 hsa-miR-3147 1 0 0
chr14:104773068|104773478 hsa-miR-3176 0 1 0
chr14:104773068|104773478 hsa-miR-3181 1 0 0
chr14:104773068|104773478 hsa-miR-4281 1 0 0
chr14:104773068|104773478 hsa-miR-4292 0 1 0
chr14:104773068|104773478 hsa-miR-3649 0 1 0
chr14:104773068|104773478 hsa-miR-3652 1 0 0
chr14:104773068|104773478 hsa-miR-3937 1 0 0
chr14:104773068|104773478 hsa-miR-3945 1 0 0
chr14:104773068|104773478 hsa-miR-4449 1 0 0
chr14:104773068|104773478 hsa-miR-3135b 1 1 0
chr14:104773068|104773478 hsa-miR-4462 1 0 0
chr14:104773068|104773478 hsa-miR-4466 1 0 0
chr14:104773068|104773478 hsa-miR-4497 1 0 0
chr14:104773068|104773478 hsa-miR-4498 1 0 0
chr14:104773068|104773478 hsa-miR-4505 1 0 0
chr14:104773068|104773478 hsa-miR-4516 1 0 0
chr14:104773068|104773478 hsa-miR-1587 1 0 0
chr14:104773068|104773478 hsa-miR-4692 0 1 0
chr14:104773068|104773478 hsa-miR-4706 1 0 0
chr14:104773068|104773478 hsa-miR-4734 1 0 0
chr14:104773068|104773478 hsa-miR-4739 1 0 0
chr14:104773068|104773478 hsa-miR-4741 1 1 0
chr14:104773068|104773478 hsa-miR-5787 1 0 0
chr14:104773068|104773478 hsa-miR-6085 1 0 0
chr14:104773068|104773478 hsa-miR-6131 1 0 0
chr14:104773068|104773478 hsa-miR-6132 0 1 0
chr14:104773068|104773478 hsa-miR-6860 1 0 0
chr14:104773068|104773478 hsa-miR-8089 1 0 0
chr14:104773068|104773478 hsa-miR-12118 0 1 0
chr14:104773068|104773478 hsa-miR-12128 1 1 0
chr14:104773068|104773478 hsa-miR-128-1-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4731-5p 1 1 0
chr14:104773068|104773478 hsa-miR-7106-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4687-3p 1 0 0
chr14:104773068|104773478 hsa-miR-3692-5p 0 1 0
chr14:104773068|104773478 hsa-miR-6089 1 0 0
chr14:104773068|104773478 hsa-miR-6880-5p 1 0 0
chr14:104773068|104773478 hsa-miR-7847-3p 1 0 0
chr14:104773068|104773478 hsa-miR-4722-5p 1 0 0
chr14:104773068|104773478 hsa-miR-7154-3p 0 1 0
chr14:104773068|104773478 hsa-miR-6741-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6806-5p 1 1 0
chr14:104773068|104773478 hsa-miR-6721-5p 0 1 0
chr14:104773068|104773478 hsa-miR-4655-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6798-5p 1 1 0
chr14:104773068|104773478 hsa-miR-6852-5p 0 1 0
chr14:104773068|104773478 hsa-miR-1229-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6784-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4640-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6753-5p 1 0 0
chr14:104773068|104773478 hsa-miR-92b-5p 1 0 0
chr14:104773068|104773478 hsa-miR-149-3p 1 0 0
chr14:104773068|104773478 hsa-miR-4776-5p 1 0 0
chr14:104773068|104773478 hsa-miR-7112-5p 1 1 0
chr14:104773068|104773478 hsa-miR-7160-3p 0 1 0
chr14:104773068|104773478 hsa-miR-1250-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4746-3p 1 0 0
chr14:104773068|104773478 hsa-miR-4761-5p 0 1 0
chr14:104773068|104773478 hsa-miR-2114-3p 1 0 0
chr14:104773068|104773478 hsa-miR-6770-3p 0 1 0
chr14:104773068|104773478 hsa-miR-4649-3p 0 1 0
chr14:104773068|104773478 hsa-miR-499b-5p 0 1 0
chr14:104773068|104773478 hsa-miR-6503-3p 1 0 0
chr14:104773068|104773478 hsa-miR-10400-5p 1 0 0
chr14:104773068|104773478 hsa-miR-1233-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4763-3p 1 1 0
chr14:104773068|104773478 hsa-miR-6778-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6816-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6893-5p 1 1 0
chr14:104773068|104773478 hsa-miR-6775-5p 1 0 0
chr14:104773068|104773478 hsa-miR-5001-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6743-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6756-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6803-5p 1 0 0
chr14:104773068|104773478 hsa-miR-1249-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6722-3p 1 1 0
chr14:104773068|104773478 hsa-miR-6808-5p 1 1 0
chr14:104773068|104773478 hsa-miR-3620-5p 1 0 0
chr14:104773068|104773478 hsa-miR-5189-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6836-5p 1 1 0
chr14:104773068|104773478 hsa-miR-10396b-5p 1 0 0
chr14:104773068|104773478 hsa-miR-1237-5p 1 0 0
chr14:104773068|104773478 hsa-miR-1909-3p 0 1 0
chr14:104773068|104773478 hsa-miR-328-5p 1 1 0
chr14:104773068|104773478 hsa-miR-4725-3p 1 0 0
chr14:104773068|104773478 hsa-miR-4749-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6848-5p 1 0 0
chr14:104773068|104773478 hsa-miR-4697-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6885-5p 0 1 0
chr14:104773068|104773478 hsa-miR-939-5p 1 1 0
chr14:104773068|104773478 hsa-miR-365a-5p 1 0 0
chr14:104773068|104773478 hsa-miR-365b-5p 1 1 0
chr14:104773068|104773478 hsa-miR-6511b-5p 1 0 0
chr14:104773068|104773478 hsa-miR-3085-5p 1 1 0
chr14:104773068|104773478 hsa-miR-3940-5p 1 0 0
chr14:104773068|104773478 hsa-miR-3173-3p 0 1 0
chr14:104773068|104773478 hsa-miR-6891-5p 1 1 0
chr14:104773068|104773478 hsa-miR-6785-5p 1 0 0
chr14:104773068|104773478 hsa-miR-6791-5p 0 1 0
chr14:104773068|104773478 hsa-miR-3622a-3p 0 1 0
chr14:104773068|104773478 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:104773068|104773478
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MSSSTSGARYSGVPQKVFMVAPSLIPSLHSPKSVILMCPSLSSMRFSS
Nucleotide Sequence TTGTCCTCCAGCACCTCGGGGGCCAGGTACTCAGGTGTGCCGCAAAAGGTCTTCATGGTGGCACCGTCCTTGATCCCCTCCTTGCACAGCCCGAAGTCTGTGATCTTAATGTGCCCGTCCTTGTCCAGCATGAGGTTCTCCAGCTAG
CircID chr14:104773068|104773478
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG
Nucleotide Sequence CTGGAGAACCTCATGCTGGACAAGGACGGGCACATTAAGATCACAGACTTCGGGCTGTGCAAGGAGGGGATCAAGGACGGTGCCACCATGAAGACCTTTTGCGGCACACCTGAGTACCTGGCCCCCGAGGTGCTGGAGGACAATGACTACGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab