CircRNA Information

General Information
circRNA Basic Information
CircID chr14:104802735|104802859
Strand -
CircType exon
Host Gene ENSG00000179627.9;
Algorism CIRI2;
Sequence ACTATCTTCCTCTCCCGTCCCCTCCAGCCAAGTTCTGAGGGGTGTCCAACCAGCACCTGGCTCTGCCCCCGTTTCTCCGTGTGAGATGGCACATCCATCTCCCGGCCCGGGACTTTCCTGACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:104802735|104802859 hsa-miR-647 0 0 1
chr14:104802735|104802859 hsa-miR-873-5p 0 0 1
chr14:104802735|104802859 hsa-miR-873-3p 0 0 1
chr14:104802735|104802859 hsa-miR-1227-5p 0 0 1
chr14:104802735|104802859 hsa-miR-1227-3p 0 0 1
chr14:104802735|104802859 hsa-miR-486-3p 1 0 1
chr14:104802735|104802859 hsa-miR-455-5p 0 0 1
chr14:104802735|104802859 hsa-miR-342-3p 0 1 1
chr14:104802735|104802859 hsa-miR-138 0 0 1
chr14:104802735|104802859 hsa-miR-637 1 0 0
chr14:104802735|104802859 hsa-miR-650 1 0 0
chr14:104802735|104802859 hsa-miR-762 1 0 0
chr14:104802735|104802859 hsa-miR-765 1 0 0
chr14:104802735|104802859 hsa-miR-940 1 0 0
chr14:104802735|104802859 hsa-miR-1203 1 0 0
chr14:104802735|104802859 hsa-miR-1270 1 0 0
chr14:104802735|104802859 hsa-miR-3132 1 0 0
chr14:104802735|104802859 hsa-miR-3196 1 0 0
chr14:104802735|104802859 hsa-miR-3652 1 1 0
chr14:104802735|104802859 hsa-miR-3916 0 1 0
chr14:104802735|104802859 hsa-miR-4430 1 1 0
chr14:104802735|104802859 hsa-miR-4449 0 1 0
chr14:104802735|104802859 hsa-miR-3135b 0 1 0
chr14:104802735|104802859 hsa-miR-4463 1 0 0
chr14:104802735|104802859 hsa-miR-4467 1 0 0
chr14:104802735|104802859 hsa-miR-4488 1 0 0
chr14:104802735|104802859 hsa-miR-4505 1 0 0
chr14:104802735|104802859 hsa-miR-4507 1 0 0
chr14:104802735|104802859 hsa-miR-1587 1 0 0
chr14:104802735|104802859 hsa-miR-3960 1 0 0
chr14:104802735|104802859 hsa-miR-4656 1 0 0
chr14:104802735|104802859 hsa-miR-4688 1 0 0
chr14:104802735|104802859 hsa-miR-4730 1 0 0
chr14:104802735|104802859 hsa-miR-4739 1 0 0
chr14:104802735|104802859 hsa-miR-5090 1 0 0
chr14:104802735|104802859 hsa-miR-5194 1 0 0
chr14:104802735|104802859 hsa-miR-5787 1 0 0
chr14:104802735|104802859 hsa-miR-6085 1 0 0
chr14:104802735|104802859 hsa-miR-6132 1 0 0
chr14:104802735|104802859 hsa-miR-8085 0 1 0
chr14:104802735|104802859 hsa-miR-12118 1 0 0
chr14:104802735|104802859 hsa-miR-12120 1 0 0
chr14:104802735|104802859 hsa-miR-6734-5p 1 0 0
chr14:104802735|104802859 hsa-miR-671-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6728-5p 1 0 0
chr14:104802735|104802859 hsa-miR-766-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6515-5p 1 1 0
chr14:104802735|104802859 hsa-miR-6757-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6746-5p 0 1 0
chr14:104802735|104802859 hsa-miR-6820-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6727-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6721-5p 1 0 0
chr14:104802735|104802859 hsa-miR-197-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6716-5p 1 0 0
chr14:104802735|104802859 hsa-miR-1292-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3180-3p 1 0 0
chr14:104802735|104802859 hsa-miR-6772-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6805-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6798-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6810-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6835-5p 1 0 0
chr14:104802735|104802859 hsa-miR-7109-5p 1 0 0
chr14:104802735|104802859 hsa-miR-1226-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4640-5p 1 0 0
chr14:104802735|104802859 hsa-miR-1908-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6771-5p 0 1 0
chr14:104802735|104802859 hsa-miR-92b-5p 0 1 0
chr14:104802735|104802859 hsa-miR-4732-5p 1 0 0
chr14:104802735|104802859 hsa-miR-7854-3p 1 0 0
chr14:104802735|104802859 hsa-miR-4787-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4638-3p 1 1 0
chr14:104802735|104802859 hsa-miR-149-3p 1 0 0
chr14:104802735|104802859 hsa-miR-5010-5p 0 1 0
chr14:104802735|104802859 hsa-miR-423-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3191-3p 1 0 0
chr14:104802735|104802859 hsa-miR-4652-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6499-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4638-5p 1 0 0
chr14:104802735|104802859 hsa-miR-483-5p 0 1 0
chr14:104802735|104802859 hsa-miR-2277-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3144-5p 1 0 0
chr14:104802735|104802859 hsa-miR-552-3p 0 1 0
chr14:104802735|104802859 hsa-miR-3186-3p 0 1 0
chr14:104802735|104802859 hsa-miR-10400-5p 1 0 0
chr14:104802735|104802859 hsa-miR-1207-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4763-3p 1 1 0
chr14:104802735|104802859 hsa-miR-6816-5p 1 1 0
chr14:104802735|104802859 hsa-miR-6870-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3180 1 0 0
chr14:104802735|104802859 hsa-miR-5001-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6743-5p 1 1 0
chr14:104802735|104802859 hsa-miR-6756-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6803-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6813-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6815-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6819-5p 1 0 0
chr14:104802735|104802859 hsa-miR-1249-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6779-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6780a-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6797-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6808-5p 1 0 0
chr14:104802735|104802859 hsa-miR-7111-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3620-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4728-5p 1 0 0
chr14:104802735|104802859 hsa-miR-5196-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6780b-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6836-5p 1 0 0
chr14:104802735|104802859 hsa-miR-10526-3p 1 0 0
chr14:104802735|104802859 hsa-miR-1237-5p 1 1 0
chr14:104802735|104802859 hsa-miR-1909-3p 1 0 0
chr14:104802735|104802859 hsa-miR-328-5p 1 0 0
chr14:104802735|104802859 hsa-miR-4749-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6735-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6738-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6794-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6795-5p 1 1 0
chr14:104802735|104802859 hsa-miR-6846-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6848-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6887-5p 1 1 0
chr14:104802735|104802859 hsa-miR-4697-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6831-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6845-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6885-5p 1 0 0
chr14:104802735|104802859 hsa-miR-3940-5p 1 0 0
chr14:104802735|104802859 hsa-miR-6731-5p 1 1 0
chr14:104802735|104802859 hsa-miR-7843-5p 1 1 0
chr14:104802735|104802859 hsa-miR-1914-3p 1 0 0
chr14:104802735|104802859 hsa-miR-4665-5p 1 0 0
chr14:104802735|104802859 hsa-miR-10398-3p 1 0 0
chr14:104802735|104802859 hsa-miR-3173-3p 1 0 0
chr14:104802735|104802859 hsa-miR-3689d 0 1 0
chr14:104802735|104802859 hsa-miR-6859-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:104802735|104802859
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MRGVQPAPGSAPVSPCEMAHPSPGPGLS
Nucleotide Sequence CTGAGGGGTGTCCAACCAGCACCTGGCTCTGCCCCCGTTTCTCCGTGTGAGATGGCACATCCATCTCCCGGCCCGGGACTTTCCTGA
CircID chr14:104802735|104802859
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MDVPSHTEKRGQSQVLVGHPSELGWRGRERKI
Nucleotide Sequence ATGGATGTGCCATCTCACACGGAGAAACGGGGGCAGAGCCAGGTGCTGGTTGGACACCCCTCAGAACTTGGCTGGAGGGGACGGGAGAGGAAGATA
CircID chr14:104802735|104802859
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MCHLTRRNGGRARCWLDTPQNLAGGDGRGR
Nucleotide Sequence ATGTGCCATCTCACACGGAGAAACGGGGGCAGAGCCAGGTGCTGGTTGGACACCCCTCAGAACTTGGCTGGAGGGGACGGGAGAGGAAGATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab