CircRNA Information

General Information
circRNA Basic Information
CircID chr14:104891851|104892001
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTCGCCAGACACTGGCACGACCAGAGAAACACCCCCAGCACCCTCTGCCCAGATGGCCTTGCACATCCCACTGGCTGCCCTGGCCCCATTCAGGACTGGGTCCTAGCTGGGTCCACCATTCCACATCAAGACAAAACATGGAAGCCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:104891851|104892001 hsa-miR-19a-5p 0 0 1
chr14:104891851|104892001 hsa-miR-19a-3p 0 0 1
chr14:104891851|104892001 hsa-miR-206 0 0 1
chr14:104891851|104892001 hsa-miR-326 0 0 1
chr14:104891851|104892001 hsa-miR-431-5p 0 0 1
chr14:104891851|104892001 hsa-miR-431-3p 0 0 1
chr14:104891851|104892001 hsa-miR-511-5p 0 0 1
chr14:104891851|104892001 hsa-miR-511-3p 0 0 1
chr14:104891851|104892001 hsa-miR-575 0 0 1
chr14:104891851|104892001 hsa-miR-609 0 1 1
chr14:104891851|104892001 hsa-miR-612 0 1 1
chr14:104891851|104892001 hsa-miR-613 0 0 1
chr14:104891851|104892001 hsa-miR-637 1 1 1
chr14:104891851|104892001 hsa-miR-1231 0 0 1
chr14:104891851|104892001 hsa-miR-199a-5p 0 0 1
chr14:104891851|104892001 hsa-miR-199b-5p 0 0 1
chr14:104891851|104892001 hsa-miR-330-5p 0 0 1
chr14:104891851|104892001 hsa-miR-1285 0 0 1
chr14:104891851|104892001 hsa-miR-19b 0 0 1
chr14:104891851|104892001 hsa-miR-1 0 0 1
chr14:104891851|104892001 hsa-miR-648 1 0 0
chr14:104891851|104892001 hsa-miR-663a 1 0 0
chr14:104891851|104892001 hsa-miR-658 1 0 0
chr14:104891851|104892001 hsa-miR-762 1 0 0
chr14:104891851|104892001 hsa-miR-711 0 1 0
chr14:104891851|104892001 hsa-miR-2861 1 0 0
chr14:104891851|104892001 hsa-miR-3132 1 0 0
chr14:104891851|104892001 hsa-miR-3147 1 0 0
chr14:104891851|104892001 hsa-miR-3907 1 0 0
chr14:104891851|104892001 hsa-miR-4486 1 0 0
chr14:104891851|104892001 hsa-miR-4491 1 1 0
chr14:104891851|104892001 hsa-miR-4525 1 0 0
chr14:104891851|104892001 hsa-miR-4535 0 1 0
chr14:104891851|104892001 hsa-miR-4651 1 0 0
chr14:104891851|104892001 hsa-miR-4654 1 1 0
chr14:104891851|104892001 hsa-miR-4656 1 0 0
chr14:104891851|104892001 hsa-miR-4657 0 1 0
chr14:104891851|104892001 hsa-miR-4688 1 0 0
chr14:104891851|104892001 hsa-miR-4721 1 1 0
chr14:104891851|104892001 hsa-miR-4741 1 0 0
chr14:104891851|104892001 hsa-miR-5090 1 0 0
chr14:104891851|104892001 hsa-miR-5194 1 0 0
chr14:104891851|104892001 hsa-miR-5787 1 0 0
chr14:104891851|104892001 hsa-miR-6860 1 1 0
chr14:104891851|104892001 hsa-miR-7150 1 0 0
chr14:104891851|104892001 hsa-miR-128-1-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6861-5p 1 0 0
chr14:104891851|104892001 hsa-miR-7106-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6728-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6804-5p 0 1 0
chr14:104891851|104892001 hsa-miR-6833-5p 0 1 0
chr14:104891851|104892001 hsa-miR-1227-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6089 1 0 0
chr14:104891851|104892001 hsa-miR-4722-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6890-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6741-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6727-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6721-5p 1 0 0
chr14:104891851|104892001 hsa-miR-197-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6742-5p 0 1 0
chr14:104891851|104892001 hsa-miR-185-3p 1 0 0
chr14:104891851|104892001 hsa-miR-6732-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6798-5p 1 0 0
chr14:104891851|104892001 hsa-miR-486-3p 1 0 0
chr14:104891851|104892001 hsa-miR-6810-5p 1 0 0
chr14:104891851|104892001 hsa-miR-5006-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6786-5p 1 0 0
chr14:104891851|104892001 hsa-miR-5088-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1226-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1229-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6784-5p 1 0 0
chr14:104891851|104892001 hsa-miR-4640-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6753-5p 1 0 0
chr14:104891851|104892001 hsa-miR-885-3p 1 0 0
chr14:104891851|104892001 hsa-miR-4764-5p 0 1 0
chr14:104891851|104892001 hsa-miR-1228-5p 1 0 0
chr14:104891851|104892001 hsa-miR-3191-5p 0 1 0
chr14:104891851|104892001 hsa-miR-6749-5p 1 0 0
chr14:104891851|104892001 hsa-miR-299-3p 0 1 0
chr14:104891851|104892001 hsa-miR-6781-5p 1 0 0
chr14:104891851|104892001 hsa-miR-194-3p 0 1 0
chr14:104891851|104892001 hsa-miR-4800-5p 0 1 0
chr14:104891851|104892001 hsa-miR-2115-5p 1 1 0
chr14:104891851|104892001 hsa-miR-3158-3p 1 1 0
chr14:104891851|104892001 hsa-miR-1298-3p 0 1 0
chr14:104891851|104892001 hsa-miR-6733-3p 0 1 0
chr14:104891851|104892001 hsa-miR-10400-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1207-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1233-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1273h-5p 1 0 0
chr14:104891851|104892001 hsa-miR-4763-3p 1 1 0
chr14:104891851|104892001 hsa-miR-6775-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6726-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6737-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6752-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6803-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6819-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6842-5p 1 1 0
chr14:104891851|104892001 hsa-miR-7110-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6722-3p 1 0 0
chr14:104891851|104892001 hsa-miR-6751-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6774-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6808-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6879-5p 1 1 0
chr14:104891851|104892001 hsa-miR-5189-5p 1 1 0
chr14:104891851|104892001 hsa-miR-5196-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6836-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1237-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1909-3p 1 0 0
chr14:104891851|104892001 hsa-miR-4632-5p 1 1 0
chr14:104891851|104892001 hsa-miR-4649-5p 1 0 0
chr14:104891851|104892001 hsa-miR-4685-5p 1 1 0
chr14:104891851|104892001 hsa-miR-4726-5p 1 1 0
chr14:104891851|104892001 hsa-miR-4745-5p 1 0 0
chr14:104891851|104892001 hsa-miR-4749-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6729-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6735-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6846-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6848-5p 1 0 0
chr14:104891851|104892001 hsa-miR-3187-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6831-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6845-5p 1 1 0
chr14:104891851|104892001 hsa-miR-939-5p 1 0 0
chr14:104891851|104892001 hsa-miR-1238-5p 1 0 0
chr14:104891851|104892001 hsa-miR-4758-5p 1 1 0
chr14:104891851|104892001 hsa-miR-4769-5p 0 1 0
chr14:104891851|104892001 hsa-miR-4646-5p 1 0 0
chr14:104891851|104892001 hsa-miR-6762-5p 1 1 0
chr14:104891851|104892001 hsa-miR-6837-5p 1 1 0
chr14:104891851|104892001 hsa-miR-3130-5p 1 1 0
chr14:104891851|104892001 hsa-miR-4676-5p 0 1 0
chr14:104891851|104892001 hsa-miR-6824-3p 0 1 0
chr14:104891851|104892001 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:104891851|104892001
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MARPEKHPQHPLPRWPCTSHWLPWPHSGLGPSWVHHSTSRQNMEAL
Nucleotide Sequence CTGGCACGACCAGAGAAACACCCCCAGCACCCTCTGCCCAGATGGCCTTGCACATCCCACTGGCTGCCCTGGCCCCATTCAGGACTGGGTCCTAGCTGGGTCCACCATTCCACATCAAGACAAAACATGGAAGCCCTC
CircID chr14:104891851|104892001
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MNGARAASGMCKAIWAEGAGGVSLVVPVSGE
Nucleotide Sequence CTGAATGGGGCCAGGGCAGCCAGTGGGATGTGCAAGGCCATCTGGGCAGAGGGTGCTGGGGGTGTTTCTCTGGTCGTGCCAGTGTCTGGCGAG
CircID chr14:104891851|104892001
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MGPGQPVGCARPSGQRVLGVFLWSCQCLAR
Nucleotide Sequence ATGGGGCCAGGGCAGCCAGTGGGATGTGCAAGGCCATCTGGGCAGAGGGTGCTGGGGGTGTTTCTCTGGTCGTGCCAGTGTCTGGCGAGG
CircID chr14:104891851|104892001
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MFCLDVEWWTQLGPSPEWGQGSQWDVQGHLGRGCWGCFSGRASVWR
Nucleotide Sequence ATGTTTTGTCTTGATGTGGAATGGTGGACCCAGCTAGGACCCAGTCCTGAATGGGGCCAGGGCAGCCAGTGGGATGTGCAAGGCCATCTGGGCAGAGGGTGCTGGGGGTGTTTCTCTGGTCGTGCCAGTGTCTGGCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab