CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105250553|105250695
Strand +
CircType exon
Host Gene ENSG00000184887.12;
Algorism CIRI2;
Sequence CTGCTGCAGCCTCCCCGGGCACCTCAGGCATAGAAAATGAGCTCAGGGATCTGCCCACCCTGGACCCCAGTCCCGTTGGTGCTGTCCGAGGAGCACTGGAACTGGAAGGCCACCTTTCCACACTGCACTTCCGTCATCCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105250553|105250695 hsa-miR-29a-5p 0 0 1
chr14:105250553|105250695 hsa-miR-29a-3p 0 0 1
chr14:105250553|105250695 hsa-miR-107 0 0 1
chr14:105250553|105250695 hsa-miR-29c-5p 0 0 1
chr14:105250553|105250695 hsa-miR-29c-3p 0 0 1
chr14:105250553|105250695 hsa-miR-541-5p 0 0 1
chr14:105250553|105250695 hsa-miR-541-3p 0 0 1
chr14:105250553|105250695 hsa-miR-1825 0 1 1
chr14:105250553|105250695 hsa-miR-145-5p 0 0 1
chr14:105250553|105250695 hsa-miR-615-5p 1 1 1
chr14:105250553|105250695 hsa-miR-485-5p 0 0 1
chr14:105250553|105250695 hsa-miR-199a-5p 0 0 1
chr14:105250553|105250695 hsa-miR-1184 0 0 1
chr14:105250553|105250695 hsa-miR-654-5p 0 0 1
chr14:105250553|105250695 hsa-miR-532-5p 0 0 1
chr14:105250553|105250695 hsa-miR-199b-5p 0 0 1
chr14:105250553|105250695 hsa-miR-125a-5p 0 1 1
chr14:105250553|105250695 hsa-miR-519b-3p 0 0 1
chr14:105250553|105250695 hsa-miR-519c-3p 0 0 1
chr14:105250553|105250695 hsa-miR-125b 0 0 1
chr14:105250553|105250695 hsa-miR-103 0 0 1
chr14:105250553|105250695 hsa-miR-1201 0 0 1
chr14:105250553|105250695 hsa-miR-29b 0 0 1
chr14:105250553|105250695 hsa-miR-519a 0 0 1
chr14:105250553|105250695 hsa-miR-612 1 1 0
chr14:105250553|105250695 hsa-miR-638 1 0 0
chr14:105250553|105250695 hsa-miR-762 1 1 0
chr14:105250553|105250695 hsa-miR-1200 0 1 0
chr14:105250553|105250695 hsa-miR-2861 1 0 0
chr14:105250553|105250695 hsa-miR-3132 1 0 0
chr14:105250553|105250695 hsa-miR-3197 1 0 0
chr14:105250553|105250695 hsa-miR-3917 0 1 0
chr14:105250553|105250695 hsa-miR-4450 1 0 0
chr14:105250553|105250695 hsa-miR-4515 1 1 0
chr14:105250553|105250695 hsa-miR-1587 1 0 0
chr14:105250553|105250695 hsa-miR-3978 0 1 0
chr14:105250553|105250695 hsa-miR-4651 1 0 0
chr14:105250553|105250695 hsa-miR-4674 1 0 0
chr14:105250553|105250695 hsa-miR-4683 1 0 0
chr14:105250553|105250695 hsa-miR-5100 1 0 0
chr14:105250553|105250695 hsa-miR-5787 1 0 0
chr14:105250553|105250695 hsa-miR-6085 1 0 0
chr14:105250553|105250695 hsa-miR-8089 1 0 0
chr14:105250553|105250695 hsa-miR-7155-5p 0 1 0
chr14:105250553|105250695 hsa-miR-6747-5p 1 0 0
chr14:105250553|105250695 hsa-miR-3150a-3p 1 0 0
chr14:105250553|105250695 hsa-miR-6825-5p 0 1 0
chr14:105250553|105250695 hsa-miR-5187-5p 1 1 0
chr14:105250553|105250695 hsa-miR-3192-5p 0 1 0
chr14:105250553|105250695 hsa-miR-6744-5p 0 1 0
chr14:105250553|105250695 hsa-miR-6730-5p 0 1 0
chr14:105250553|105250695 hsa-miR-7160-5p 1 0 0
chr14:105250553|105250695 hsa-miR-197-5p 1 0 0
chr14:105250553|105250695 hsa-miR-3180-3p 1 0 0
chr14:105250553|105250695 hsa-miR-6732-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6805-5p 1 0 0
chr14:105250553|105250695 hsa-miR-4633-5p 0 1 0
chr14:105250553|105250695 hsa-miR-2277-3p 1 0 0
chr14:105250553|105250695 hsa-miR-1229-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6749-5p 1 0 0
chr14:105250553|105250695 hsa-miR-4787-5p 1 0 0
chr14:105250553|105250695 hsa-miR-3925-3p 0 1 0
chr14:105250553|105250695 hsa-miR-5010-5p 1 0 0
chr14:105250553|105250695 hsa-miR-3065-3p 0 1 0
chr14:105250553|105250695 hsa-miR-584-3p 0 1 0
chr14:105250553|105250695 hsa-miR-671-3p 0 1 0
chr14:105250553|105250695 hsa-miR-670-5p 0 1 0
chr14:105250553|105250695 hsa-miR-556-5p 0 1 0
chr14:105250553|105250695 hsa-miR-4763-3p 1 0 0
chr14:105250553|105250695 hsa-miR-6812-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6816-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6870-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6743-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6752-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6756-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6769a-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6803-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6813-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6851-5p 1 0 0
chr14:105250553|105250695 hsa-miR-7110-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6722-3p 1 0 0
chr14:105250553|105250695 hsa-miR-6751-5p 1 0 0
chr14:105250553|105250695 hsa-miR-7111-5p 1 0 0
chr14:105250553|105250695 hsa-miR-3620-5p 1 0 0
chr14:105250553|105250695 hsa-miR-328-5p 1 0 0
chr14:105250553|105250695 hsa-miR-4632-5p 1 0 0
chr14:105250553|105250695 hsa-miR-4745-5p 1 0 0
chr14:105250553|105250695 hsa-miR-675-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6777-5p 0 1 0
chr14:105250553|105250695 hsa-miR-6889-5p 0 1 0
chr14:105250553|105250695 hsa-miR-365a-5p 1 0 0
chr14:105250553|105250695 hsa-miR-7843-5p 1 0 0
chr14:105250553|105250695 hsa-miR-6855-5p 1 1 0
chr14:105250553|105250695 hsa-miR-6766-5p 1 1 0
chr14:105250553|105250695 hsa-miR-302c-3p 1 0 0
chr14:105250553|105250695 hsa-miR-6791-5p 1 0 0
chr14:105250553|105250695 hsa-miR-5581-5p 0 1 0
chr14:105250553|105250695 hsa-miR-99b-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:105250553|105250695
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MSSGICPPWTPVPLVLSEEHWNWKATFPHCTSVIP
Nucleotide Sequence ATGAGCTCAGGGATCTGCCCACCCTGGACCCCAGTCCCGTTGGTGCTGTCCGAGGAGCACTGGAACTGGAAGGCCACCTTTCCACACTGCACTTCCGTCATCCCC
CircID chr14:105250553|105250695
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPTLDPSPVGAVRGALELEGHLSTLHFRHPL
Nucleotide Sequence CTGCCCACCCTGGACCCCAGTCCCGTTGGTGCTGTCCGAGGAGCACTGGAACTGGAAGGCCACCTTTCCACACTGCACTTCCGTCATCCCCTC
CircID chr14:105250553|105250695
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MTEVQCGKVAFQFQCSSDSTNGTGVQGGQIPELIFYA
Nucleotide Sequence ATGACGGAAGTGCAGTGTGGAAAGGTGGCCTTCCAGTTCCAGTGCTCCTCGGACAGCACCAACGGGACTGGGGTCCAGGGTGGGCAGATCCCTGAGCTCATTTTCTATGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab