CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105468854|105469002
Strand -
CircType exon
Host Gene ENSG00000182979.16;
Algorism CIRI2;
Sequence CAGGAGCATGGACCCCGCTTCTTGGCCCAACTCCCGCAGTGCCCCTTGGGCTCCTCACCCTGCACTGTGGGAAGTCAGAGGCCTCTGGCACCCCATCCCCAAGCACATGCCAGGGTGGCTGGGGCCCAGCCAGGGCAGTGGGTGGTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105468854|105469002 hsa-miR-197-5p 0 0 1
chr14:105468854|105469002 hsa-miR-197-3p 0 0 1
chr14:105468854|105469002 hsa-miR-148a-5p 0 0 1
chr14:105468854|105469002 hsa-miR-148a-3p 0 0 1
chr14:105468854|105469002 hsa-miR-152-5p 0 0 1
chr14:105468854|105469002 hsa-miR-152-3p 0 0 1
chr14:105468854|105469002 hsa-miR-148b-5p 0 0 1
chr14:105468854|105469002 hsa-miR-148b-3p 0 0 1
chr14:105468854|105469002 hsa-miR-345-5p 0 0 1
chr14:105468854|105469002 hsa-miR-345-3p 0 0 1
chr14:105468854|105469002 hsa-miR-571 0 0 1
chr14:105468854|105469002 hsa-miR-608 0 0 1
chr14:105468854|105469002 hsa-miR-617 0 1 1
chr14:105468854|105469002 hsa-miR-636 0 0 1
chr14:105468854|105469002 hsa-miR-874-5p 0 0 1
chr14:105468854|105469002 hsa-miR-874-3p 0 0 1
chr14:105468854|105469002 hsa-miR-296-5p 0 0 1
chr14:105468854|105469002 hsa-miR-615-5p 0 0 1
chr14:105468854|105469002 hsa-miR-146b-3p 0 0 1
chr14:105468854|105469002 hsa-miR-188-3p 0 1 1
chr14:105468854|105469002 hsa-miR-342-5p 0 1 1
chr14:105468854|105469002 hsa-miR-220b 0 0 1
chr14:105468854|105469002 hsa-miR-1260 0 0 1
chr14:105468854|105469002 hsa-miR-128 0 0 1
chr14:105468854|105469002 hsa-miR-218 0 0 1
chr14:105468854|105469002 hsa-miR-762 1 0 0
chr14:105468854|105469002 hsa-miR-2861 1 0 0
chr14:105468854|105469002 hsa-miR-3122 1 0 0
chr14:105468854|105469002 hsa-miR-3147 1 1 0
chr14:105468854|105469002 hsa-miR-4259 1 1 0
chr14:105468854|105469002 hsa-miR-2392 1 0 0
chr14:105468854|105469002 hsa-miR-4706 1 0 0
chr14:105468854|105469002 hsa-miR-4734 0 1 0
chr14:105468854|105469002 hsa-miR-5572 1 1 0
chr14:105468854|105469002 hsa-miR-5787 0 1 0
chr14:105468854|105469002 hsa-miR-6765-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6857-5p 0 1 0
chr14:105468854|105469002 hsa-miR-1227-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6089 1 0 0
chr14:105468854|105469002 hsa-miR-6757-5p 1 1 0
chr14:105468854|105469002 hsa-miR-6890-5p 0 1 0
chr14:105468854|105469002 hsa-miR-6842-3p 0 1 0
chr14:105468854|105469002 hsa-miR-659-3p 1 0 0
chr14:105468854|105469002 hsa-miR-6732-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6798-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6782-5p 1 0 0
chr14:105468854|105469002 hsa-miR-7855-5p 0 1 0
chr14:105468854|105469002 hsa-miR-939-3p 0 1 0
chr14:105468854|105469002 hsa-miR-4640-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6877-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6814-5p 0 1 0
chr14:105468854|105469002 hsa-miR-6812-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6775-5p 0 1 0
chr14:105468854|105469002 hsa-miR-6737-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6743-5p 1 1 0
chr14:105468854|105469002 hsa-miR-6752-5p 1 1 0
chr14:105468854|105469002 hsa-miR-6756-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6803-5p 1 1 0
chr14:105468854|105469002 hsa-miR-6819-5p 1 1 0
chr14:105468854|105469002 hsa-miR-6722-3p 1 0 0
chr14:105468854|105469002 hsa-miR-4649-5p 1 0 0
chr14:105468854|105469002 hsa-miR-4726-5p 1 0 0
chr14:105468854|105469002 hsa-miR-6848-5p 1 0 0
chr14:105468854|105469002 hsa-miR-324-3p 0 1 0
chr14:105468854|105469002 hsa-miR-6724-5p 1 1 0
chr14:105468854|105469002 hsa-miR-4757-5p 0 1 0
chr14:105468854|105469002 hsa-miR-6511b-3p 0 1 0
chr14:105468854|105469002 hsa-miR-3085-3p 0 1 0
chr14:105468854|105469002 hsa-miR-6744-3p 0 1 0
chr14:105468854|105469002 hsa-miR-6504-5p 0 1 0
chr14:105468854|105469002 hsa-miR-4799-3p 0 1 0
chr14:105468854|105469002 hsa-miR-301a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:105468854|105469002
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MAQLPQCPLGSSPCTVGSQRPLAPHPQAHARVAGAQPGQWVV
Nucleotide Sequence TTGGCCCAACTCCCGCAGTGCCCCTTGGGCTCCTCACCCTGCACTGTGGGAAGTCAGAGGCCTCTGGCACCCCATCCCCAAGCACATGCCAGGGTGGCTGGGGCCCAGCCAGGGCAGTGGGTGGTG
CircID chr14:105468854|105469002
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MDPASWPNSRSAPWAPHPALWEVRGLWHPIPKHMPGWLGPSQGSGW
Nucleotide Sequence ATGGACCCCGCTTCTTGGCCCAACTCCCGCAGTGCCCCTTGGGCTCCTCACCCTGCACTGTGGGAAGTCAGAGGCCTCTGGCACCCCATCCCCAAGCACATGCCAGGGTGGCTGGGGCCCAGCCAGGGCAGTGGGTGGTGA
CircID chr14:105468854|105469002
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MHCGKSEASGTPSPSTCQGGWGPARAVGGD
Nucleotide Sequence CTGCACTGTGGGAAGTCAGAGGCCTCTGGCACCCCATCCCCAAGCACATGCCAGGGTGGCTGGGGCCCAGCCAGGGCAGTGGGTGGTGAC
CircID chr14:105468854|105469002
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MAGPQPPWHVLGDGVPEASDFPQCRVRSPRGTAGVGPRSGVHAP
Nucleotide Sequence CTGGCTGGGCCCCAGCCACCCTGGCATGTGCTTGGGGATGGGGTGCCAGAGGCCTCTGACTTCCCACAGTGCAGGGTGAGGAGCCCAAGGGGCACTGCGGGAGTTGGGCCAAGAAGCGGGGTCCATGCTCCT
CircID chr14:105468854|105469002
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MPWLGPSHPGMCLGMGCQRPLTSHSAG
Nucleotide Sequence CTGCCCTGGCTGGGCCCCAGCCACCCTGGCATGTGCTTGGGGATGGGGTGCCAGAGGCCTCTGACTTCCCACAGTGCAGGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab