CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105488216|105488516
Strand +
CircType exon
Host Gene ENSG00000213145.8;
Algorism CIRI2;
Sequence CTGGTTTACTTGAAAGTGTGGCTCTCGGCTCCGCCCCGCCCAAAGCCTGCAGAGAAGGTGGAAAAAGTCAACAGGCTGGGGTGGAGGAGGCTGTGGGGTGGGGTGGGGTGGGGATGACGGGAGCATACCTTTAGGCCCAAACATGGCTGCGTAGCAGGGGTGGTTGCAGTAGGGTTTGCCTTCGTGCTGCAAAGAGAAGGGCCGTGAGGGGGTGCCATCACCCCTGGCCCCTGCCACCAGGGTGGGTCCCACCTACCTCAGCGTGGCCCCCAGAGGTCAGCGTCTTCCCACATTTCTCGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105488216|105488516 hsa-let-7b-5p 0 0 1
chr14:105488216|105488516 hsa-let-7b-3p 0 0 1
chr14:105488216|105488516 hsa-let-7c-5p 0 0 1
chr14:105488216|105488516 hsa-let-7c-3p 0 0 1
chr14:105488216|105488516 hsa-let-7d-5p 0 0 1
chr14:105488216|105488516 hsa-let-7d-3p 0 0 1
chr14:105488216|105488516 hsa-let-7e-5p 0 0 1
chr14:105488216|105488516 hsa-let-7e-3p 0 0 1
chr14:105488216|105488516 hsa-miR-26b-5p 0 0 1
chr14:105488216|105488516 hsa-miR-26b-3p 0 0 1
chr14:105488216|105488516 hsa-miR-98-5p 0 0 1
chr14:105488216|105488516 hsa-miR-98-3p 0 0 1
chr14:105488216|105488516 hsa-miR-107 0 0 1
chr14:105488216|105488516 hsa-miR-183-5p 0 0 1
chr14:105488216|105488516 hsa-miR-183-3p 0 0 1
chr14:105488216|105488516 hsa-miR-217-5p 0 0 1
chr14:105488216|105488516 hsa-miR-217-3p 0 0 1
chr14:105488216|105488516 hsa-let-7g-5p 0 0 1
chr14:105488216|105488516 hsa-let-7g-3p 0 0 1
chr14:105488216|105488516 hsa-let-7i-5p 0 0 1
chr14:105488216|105488516 hsa-let-7i-3p 0 0 1
chr14:105488216|105488516 hsa-miR-326 0 0 1
chr14:105488216|105488516 hsa-miR-202-5p 0 0 1
chr14:105488216|105488516 hsa-miR-202-3p 0 0 1
chr14:105488216|105488516 hsa-miR-498-5p 0 0 1
chr14:105488216|105488516 hsa-miR-498-3p 0 0 1
chr14:105488216|105488516 hsa-miR-539-5p 0 0 1
chr14:105488216|105488516 hsa-miR-539-3p 0 0 1
chr14:105488216|105488516 hsa-miR-637 0 0 1
chr14:105488216|105488516 hsa-miR-1301-5p 0 0 1
chr14:105488216|105488516 hsa-miR-1301-3p 0 0 1
chr14:105488216|105488516 hsa-miR-744-5p 0 0 1
chr14:105488216|105488516 hsa-miR-744-3p 0 0 1
chr14:105488216|105488516 hsa-miR-942-5p 0 0 1
chr14:105488216|105488516 hsa-miR-942-3p 0 0 1
chr14:105488216|105488516 hsa-miR-1205 0 1 1
chr14:105488216|105488516 hsa-miR-1297 0 0 1
chr14:105488216|105488516 hsa-miR-1247-5p 0 0 1
chr14:105488216|105488516 hsa-miR-1247-3p 0 0 1
chr14:105488216|105488516 hsa-miR-548m 0 0 1
chr14:105488216|105488516 hsa-miR-1267 0 0 1
chr14:105488216|105488516 hsa-miR-299-3p 0 1 1
chr14:105488216|105488516 hsa-miR-1184 0 0 1
chr14:105488216|105488516 hsa-miR-1207-5p 0 1 1
chr14:105488216|105488516 hsa-miR-330-5p 0 0 1
chr14:105488216|105488516 hsa-miR-509-3-5p 0 0 1
chr14:105488216|105488516 hsa-miR-509-5p 0 0 1
chr14:105488216|105488516 hsa-miR-103 0 0 1
chr14:105488216|105488516 hsa-miR-7 0 0 1
chr14:105488216|105488516 hsa-miR-26a 0 0 1
chr14:105488216|105488516 hsa-let-7a 0 0 1
chr14:105488216|105488516 hsa-let-7f 0 0 1
chr14:105488216|105488516 hsa-miR-663 0 0 1
chr14:105488216|105488516 hsa-miR-663a 0 1 0
chr14:105488216|105488516 hsa-miR-1281 1 0 0
chr14:105488216|105488516 hsa-miR-1470 1 0 0
chr14:105488216|105488516 hsa-miR-2110 1 0 0
chr14:105488216|105488516 hsa-miR-4322 1 0 0
chr14:105488216|105488516 hsa-miR-4323 1 0 0
chr14:105488216|105488516 hsa-miR-4265 1 0 0
chr14:105488216|105488516 hsa-miR-4268 1 0 0
chr14:105488216|105488516 hsa-miR-4458 0 1 0
chr14:105488216|105488516 hsa-miR-4489 0 1 0
chr14:105488216|105488516 hsa-miR-4537 0 1 0
chr14:105488216|105488516 hsa-miR-4648 1 0 0
chr14:105488216|105488516 hsa-miR-4654 1 0 0
chr14:105488216|105488516 hsa-miR-4689 1 0 0
chr14:105488216|105488516 hsa-miR-4706 1 0 0
chr14:105488216|105488516 hsa-miR-4734 0 1 0
chr14:105488216|105488516 hsa-miR-4739 1 0 0
chr14:105488216|105488516 hsa-miR-5193 1 1 0
chr14:105488216|105488516 hsa-miR-5680 0 1 0
chr14:105488216|105488516 hsa-miR-6133 1 0 0
chr14:105488216|105488516 hsa-miR-7150 0 1 0
chr14:105488216|105488516 hsa-miR-9500 1 1 0
chr14:105488216|105488516 hsa-miR-9718 1 0 0
chr14:105488216|105488516 hsa-miR-6749-3p 1 0 0
chr14:105488216|105488516 hsa-miR-6734-5p 1 0 0
chr14:105488216|105488516 hsa-miR-4731-5p 1 1 0
chr14:105488216|105488516 hsa-miR-3150a-3p 1 0 0
chr14:105488216|105488516 hsa-miR-7106-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6720-5p 1 0 0
chr14:105488216|105488516 hsa-miR-766-3p 1 0 0
chr14:105488216|105488516 hsa-miR-25-5p 0 1 0
chr14:105488216|105488516 hsa-miR-139-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6759-5p 1 0 0
chr14:105488216|105488516 hsa-miR-3189-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6849-3p 1 1 0
chr14:105488216|105488516 hsa-miR-4728-3p 1 0 0
chr14:105488216|105488516 hsa-miR-491-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6796-3p 1 0 0
chr14:105488216|105488516 hsa-miR-3180-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6796-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6782-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6735-3p 1 0 0
chr14:105488216|105488516 hsa-miR-6882-3p 1 0 0
chr14:105488216|105488516 hsa-miR-7109-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6763-3p 1 0 0
chr14:105488216|105488516 hsa-miR-1908-3p 1 0 0
chr14:105488216|105488516 hsa-miR-4640-5p 0 1 0
chr14:105488216|105488516 hsa-miR-1228-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6749-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6821-3p 0 1 0
chr14:105488216|105488516 hsa-miR-5196-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6776-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6870-3p 0 1 0
chr14:105488216|105488516 hsa-miR-4707-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6811-3p 1 0 0
chr14:105488216|105488516 hsa-miR-7106-3p 1 0 0
chr14:105488216|105488516 hsa-miR-4772-3p 0 1 0
chr14:105488216|105488516 hsa-miR-4758-3p 1 1 0
chr14:105488216|105488516 hsa-miR-1224-3p 0 1 0
chr14:105488216|105488516 hsa-miR-1180-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6886-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6729-3p 0 1 0
chr14:105488216|105488516 hsa-miR-3162-3p 1 1 0
chr14:105488216|105488516 hsa-miR-1233-5p 1 0 0
chr14:105488216|105488516 hsa-miR-4763-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6778-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6787-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6816-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6870-5p 1 0 0
chr14:105488216|105488516 hsa-miR-3180 0 1 0
chr14:105488216|105488516 hsa-miR-6756-5p 1 1 0
chr14:105488216|105488516 hsa-miR-6803-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6851-5p 1 0 0
chr14:105488216|105488516 hsa-miR-10401-5p 1 1 0
chr14:105488216|105488516 hsa-miR-6722-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6751-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6779-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6780a-5p 1 0 0
chr14:105488216|105488516 hsa-miR-7111-5p 1 0 0
chr14:105488216|105488516 hsa-miR-320a-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6754-3p 1 0 0
chr14:105488216|105488516 hsa-miR-10396a-5p 0 1 0
chr14:105488216|105488516 hsa-miR-10396b-5p 0 1 0
chr14:105488216|105488516 hsa-miR-1237-5p 0 1 0
chr14:105488216|105488516 hsa-miR-1909-3p 1 1 0
chr14:105488216|105488516 hsa-miR-328-5p 1 0 0
chr14:105488216|105488516 hsa-miR-4726-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6846-5p 1 1 0
chr14:105488216|105488516 hsa-miR-6848-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6845-5p 0 1 0
chr14:105488216|105488516 hsa-miR-4758-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6511b-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6791-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6877-3p 1 0 0
chr14:105488216|105488516 hsa-miR-4646-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6762-5p 0 1 0
chr14:105488216|105488516 hsa-miR-6893-3p 1 0 0
chr14:105488216|105488516 hsa-miR-6784-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6792-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6801-3p 0 1 0
chr14:105488216|105488516 hsa-miR-6829-3p 1 1 0
chr14:105488216|105488516 hsa-miR-6819-3p 1 0 0
chr14:105488216|105488516 hsa-miR-7114-3p 0 1 0
chr14:105488216|105488516 hsa-miR-10394-5p 0 1 0
chr14:105488216|105488516 hsa-miR-4691-5p 1 0 0
chr14:105488216|105488516 hsa-miR-1234-3p 1 0 0
chr14:105488216|105488516 hsa-miR-6781-3p 0 1 0
chr14:105488216|105488516 hsa-miR-4690-3p 1 0 0
chr14:105488216|105488516 hsa-miR-128-2-5p 1 0 0
chr14:105488216|105488516 hsa-miR-6824-3p 1 0 0
chr14:105488216|105488516 hsa-miR-524-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:105488216|105488516
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence LVYLKVWLSAPPRPKPAEKVEKVNRLGWRRLWGGVGWG
Nucleotide Sequence CTGGTTTACTTGAAAGTGTGGCTCTCGGCTCCGCCCCGCCCAAAGCCTGCAGAGAAGGTGGAAAAAGTCAACAGGCTGGGGTGGAGGAGGCTGTGGGGTGGGGTGGGGTGGGGATGA
CircID chr14:105488216|105488516
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MQRRWKKSTGWGGGGCGVGWGGDDGSIPLGPNMAA
Nucleotide Sequence CTGCAGAGAAGGTGGAAAAAGTCAACAGGCTGGGGTGGAGGAGGCTGTGGGGTGGGGTGGGGTGGGGATGACGGGAGCATACCTTTAGGCCCAAACATGGCTGCGTAG
CircID chr14:105488216|105488516
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MPSCCKEKGREGVPSPLAPATRVGPTYLSVAPRGQRLPTFLA
Nucleotide Sequence TTGCCTTCGTGCTGCAAAGAGAAGGGCCGTGAGGGGGTGCCATCACCCCTGGCCCCTGCCACCAGGGTGGGTCCCACCTACCTCAGCGTGGCCCCCAGAGGTCAGCGTCTTCCCACATTTCTCGCA
CircID chr14:105488216|105488516
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MRSRGGCSRVCLRAAKRRAVRGCHHPWPLPPGWVPPTSAWPPEVSVFPHFS
Nucleotide Sequence CTGCGTAGCAGGGGTGGTTGCAGTAGGGTTTGCCTTCGTGCTGCAAAGAGAAGGGCCGTGAGGGGGTGCCATCACCCCTGGCCCCTGCCACCAGGGTGGGTCCCACCTACCTCAGCGTGGCCCCCAGAGGTCAGCGTCTTCCCACATTTCTCG
CircID chr14:105488216|105488516
ORF Type ORF5
Protein Length 80
Nucleotide Length 240
Protein Sequence MVAGARGDGTPSRPFSLQHEGKPYCNHPCYAAMFGPKGMLPSSPPHPTPQPPPPQPVDFFHLLCRLWAGRSREPHFQVNQ
Nucleotide Sequence CTGGTGGCAGGGGCCAGGGGTGATGGCACCCCCTCACGGCCCTTCTCTTTGCAGCACGAAGGCAAACCCTACTGCAACCACCCCTGCTACGCAGCCATGTTTGGGCCTAAAGGTATGCTCCCGTCATCCCCACCCCACCCCACCCCACAGCCTCCTCCACCCCAGCCTGTTGACTTTTTCCACCTTCTCTGCAGGCTTTGGGCGGGGCGGAGCCGAGAGCCACACTTTCAAGTAAACCAG
CircID chr14:105488216|105488516
ORF Type ORF6
Protein Length 70
Nucleotide Length 213
Protein Sequence MAPPHGPSLCSTKANPTATTPATQPCLGLKVCSRHPHPTPPHSLLHPSLLTFSTFSAGFGRGGAESHTFK
Nucleotide Sequence ATGGCACCCCCTCACGGCCCTTCTCTTTGCAGCACGAAGGCAAACCCTACTGCAACCACCCCTGCTACGCAGCCATGTTTGGGCCTAAAGGTATGCTCCCGTCATCCCCACCCCACCCCACCCCACAGCCTCCTCCACCCCAGCCTGTTGACTTTTTCCACCTTCTCTGCAGGCTTTGGGCGGGGCGGAGCCGAGAGCCACACTTTCAAGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab