CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105492711|105492903
Strand +
CircType exon
Host Gene ENSG00000185347.16;
Algorism CIRI2;
Sequence AAGGACCACCGGGAACCACGGGCTCAGGCTTTGGGTAAGCCAGGGCAGGAAGGCCCACATCCAGCCAAAAGCCTGTGCCAGGCCTCACGGGACGGGCTGCAGGGACTGGCAGCTGGCGGCCTGCAGCACGGGACACAGCCCCTGAGTGGAAGCCCTGTGCCAGCTCTACCTTGCTCAGGAGGGCGCACTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105492711|105492903 hsa-miR-22-5p 0 0 1
chr14:105492711|105492903 hsa-miR-22-3p 0 0 1
chr14:105492711|105492903 hsa-miR-510-5p 0 0 1
chr14:105492711|105492903 hsa-miR-510-3p 0 0 1
chr14:105492711|105492903 hsa-miR-647 0 0 1
chr14:105492711|105492903 hsa-miR-874-5p 0 0 1
chr14:105492711|105492903 hsa-miR-874-3p 0 0 1
chr14:105492711|105492903 hsa-miR-1200 0 1 1
chr14:105492711|105492903 hsa-miR-1205 0 0 1
chr14:105492711|105492903 hsa-miR-1287-5p 0 0 1
chr14:105492711|105492903 hsa-miR-1287-3p 0 0 1
chr14:105492711|105492903 hsa-miR-1247-5p 0 0 1
chr14:105492711|105492903 hsa-miR-1247-3p 0 0 1
chr14:105492711|105492903 hsa-miR-1266-5p 0 0 1
chr14:105492711|105492903 hsa-miR-1266-3p 0 0 1
chr14:105492711|105492903 hsa-miR-1225-3p 0 0 1
chr14:105492711|105492903 hsa-miR-299-3p 0 0 1
chr14:105492711|105492903 hsa-miR-146b-3p 0 0 1
chr14:105492711|105492903 hsa-miR-1184 0 0 1
chr14:105492711|105492903 hsa-miR-1233 0 0 1
chr14:105492711|105492903 hsa-miR-323-5p 0 0 1
chr14:105492711|105492903 hsa-miR-220c 0 0 1
chr14:105492711|105492903 hsa-miR-572 1 0 0
chr14:105492711|105492903 hsa-miR-608 1 0 0
chr14:105492711|105492903 hsa-miR-612 1 0 0
chr14:105492711|105492903 hsa-miR-762 1 0 0
chr14:105492711|105492903 hsa-miR-2861 1 0 0
chr14:105492711|105492903 hsa-miR-3132 1 0 0
chr14:105492711|105492903 hsa-miR-4297 0 1 0
chr14:105492711|105492903 hsa-miR-4265 1 1 0
chr14:105492711|105492903 hsa-miR-3652 0 1 0
chr14:105492711|105492903 hsa-miR-4430 0 1 0
chr14:105492711|105492903 hsa-miR-4451 0 1 0
chr14:105492711|105492903 hsa-miR-4487 1 1 0
chr14:105492711|105492903 hsa-miR-4498 1 0 0
chr14:105492711|105492903 hsa-miR-4518 1 1 0
chr14:105492711|105492903 hsa-miR-4519 1 1 0
chr14:105492711|105492903 hsa-miR-4656 1 0 0
chr14:105492711|105492903 hsa-miR-4675 0 1 0
chr14:105492711|105492903 hsa-miR-4741 1 0 0
chr14:105492711|105492903 hsa-miR-7974 1 1 0
chr14:105492711|105492903 hsa-miR-8073 0 1 0
chr14:105492711|105492903 hsa-miR-12115 1 0 0
chr14:105492711|105492903 hsa-miR-150-3p 0 1 0
chr14:105492711|105492903 hsa-miR-6749-3p 1 0 0
chr14:105492711|105492903 hsa-miR-4665-3p 1 0 0
chr14:105492711|105492903 hsa-miR-6765-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6089 1 0 0
chr14:105492711|105492903 hsa-miR-3677-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6875-3p 1 1 0
chr14:105492711|105492903 hsa-miR-197-5p 1 1 0
chr14:105492711|105492903 hsa-miR-4725-5p 1 0 0
chr14:105492711|105492903 hsa-miR-185-3p 0 1 0
chr14:105492711|105492903 hsa-miR-6782-5p 1 0 0
chr14:105492711|105492903 hsa-miR-4436b-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6786-5p 1 0 0
chr14:105492711|105492903 hsa-miR-939-3p 0 1 0
chr14:105492711|105492903 hsa-miR-1908-3p 1 0 0
chr14:105492711|105492903 hsa-miR-3667-3p 0 1 0
chr14:105492711|105492903 hsa-let-7d-5p 0 1 0
chr14:105492711|105492903 hsa-miR-4732-5p 0 1 0
chr14:105492711|105492903 hsa-miR-6789-5p 1 0 0
chr14:105492711|105492903 hsa-miR-7156-3p 1 0 0
chr14:105492711|105492903 hsa-let-7g-5p 0 1 0
chr14:105492711|105492903 hsa-miR-6811-3p 1 0 0
chr14:105492711|105492903 hsa-miR-3158-3p 1 1 0
chr14:105492711|105492903 hsa-miR-4763-3p 1 0 0
chr14:105492711|105492903 hsa-miR-6775-5p 1 0 0
chr14:105492711|105492903 hsa-miR-5001-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6813-5p 0 1 0
chr14:105492711|105492903 hsa-miR-3620-5p 1 0 0
chr14:105492711|105492903 hsa-miR-5189-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6836-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6735-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6848-5p 1 0 0
chr14:105492711|105492903 hsa-miR-3187-5p 0 1 0
chr14:105492711|105492903 hsa-miR-6831-5p 0 1 0
chr14:105492711|105492903 hsa-miR-1199-5p 0 1 0
chr14:105492711|105492903 hsa-miR-6791-5p 1 0 0
chr14:105492711|105492903 hsa-miR-6753-3p 1 0 0
chr14:105492711|105492903 hsa-miR-10394-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:105492711|105492903
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MGKPGQEGPHPAKSLCQASRDGLQGLAAGGLQHGTQPLSGSPVPALPCSGGRTA
Nucleotide Sequence TTGGGTAAGCCAGGGCAGGAAGGCCCACATCCAGCCAAAAGCCTGTGCCAGGCCTCACGGGACGGGCTGCAGGGACTGGCAGCTGGCGGCCTGCAGCACGGGACACAGCCCCTGAGTGGAAGCCCTGTGCCAGCTCTACCTTGCTCAGGAGGGCGCACTGCT
CircID chr14:105492711|105492903
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MSKVELAQGFHSGAVSRAAGRQLPVPAARPVRPGTGFWLDVGLPALAYPKPEPVVPGGP
Nucleotide Sequence CTGAGCAAGGTAGAGCTGGCACAGGGCTTCCACTCAGGGGCTGTGTCCCGTGCTGCAGGCCGCCAGCTGCCAGTCCCTGCAGCCCGTCCCGTGAGGCCTGGCACAGGCTTTTGGCTGGATGTGGGCCTTCCTGCCCTGGCTTACCCAAAGCCTGAGCCCGTGGTTCCCGGTGGTCCT
CircID chr14:105492711|105492903
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MAQAFGWMWAFLPWLTQSLSPWFPVVL
Nucleotide Sequence CTGGCACAGGCTTTTGGCTGGATGTGGGCCTTCCTGCCCTGGCTTACCCAAAGCCTGAGCCCGTGGTTCCCGGTGGTCCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab