CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105587306|105587596
Strand +
CircType exon
Host Gene ENSG00000211890.3;
Algorism CIRI2;
Sequence CCCGAGTTGAAGACCCCACTAACCGCCAACATCACAAAATCCGGTGGGTCCAGACCCTGCTCGGGGCCCTGCTCAGTGCTCTGGTTTGCAAAGCATATTCCCGGCCTGCCTCCTCCCTCCCAATCCTGGGCTCCAGTGCTCATGCCAAGTACAGAGGGAAACTGAGGCAGGCTGAGGGGCCAGGACACAGCCCAGGGTGCCCACCAGAGCAGAGGGGCTCTCTCATCCCCTGCCCAGCCCCCTGACCTGGCTCTCTACCCTCCAGGAAACACATTCCGGCCCGAGGTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105587306|105587596 hsa-miR-206 0 0 1
chr14:105587306|105587596 hsa-miR-422a 0 0 1
chr14:105587306|105587596 hsa-miR-492 0 0 1
chr14:105587306|105587596 hsa-miR-527 0 0 1
chr14:105587306|105587596 hsa-miR-596 0 1 1
chr14:105587306|105587596 hsa-miR-612 1 1 1
chr14:105587306|105587596 hsa-miR-613 0 0 1
chr14:105587306|105587596 hsa-miR-650 0 0 1
chr14:105587306|105587596 hsa-miR-758-5p 0 0 1
chr14:105587306|105587596 hsa-miR-758-3p 0 0 1
chr14:105587306|105587596 hsa-miR-765 0 1 1
chr14:105587306|105587596 hsa-miR-890 0 0 1
chr14:105587306|105587596 hsa-miR-541-5p 0 0 1
chr14:105587306|105587596 hsa-miR-541-3p 0 0 1
chr14:105587306|105587596 hsa-miR-940 1 0 1
chr14:105587306|105587596 hsa-miR-1182 0 0 1
chr14:105587306|105587596 hsa-miR-1290 0 0 1
chr14:105587306|105587596 hsa-miR-1255a 0 0 1
chr14:105587306|105587596 hsa-miR-1321 0 0 1
chr14:105587306|105587596 hsa-miR-1827 0 0 1
chr14:105587306|105587596 hsa-miR-1225-3p 1 1 1
chr14:105587306|105587596 hsa-miR-296-5p 0 0 1
chr14:105587306|105587596 hsa-miR-615-5p 0 0 1
chr14:105587306|105587596 hsa-miR-193a-5p 0 0 1
chr14:105587306|105587596 hsa-miR-654-5p 0 0 1
chr14:105587306|105587596 hsa-miR-767-3p 0 0 1
chr14:105587306|105587596 hsa-miR-1207-5p 1 1 1
chr14:105587306|105587596 hsa-miR-518a-5p 0 0 1
chr14:105587306|105587596 hsa-miR-450b-5p 0 0 1
chr14:105587306|105587596 hsa-miR-1280 0 0 1
chr14:105587306|105587596 hsa-miR-642 0 0 1
chr14:105587306|105587596 hsa-miR-1255b 0 0 1
chr14:105587306|105587596 hsa-miR-378 0 0 1
chr14:105587306|105587596 hsa-miR-1285 0 0 1
chr14:105587306|105587596 hsa-miR-1 0 0 1
chr14:105587306|105587596 hsa-miR-637 1 0 0
chr14:105587306|105587596 hsa-miR-762 1 1 0
chr14:105587306|105587596 hsa-miR-3132 0 1 0
chr14:105587306|105587596 hsa-miR-3147 0 1 0
chr14:105587306|105587596 hsa-miR-4309 0 1 0
chr14:105587306|105587596 hsa-miR-4292 1 1 0
chr14:105587306|105587596 hsa-miR-3612 0 1 0
chr14:105587306|105587596 hsa-miR-3621 1 0 0
chr14:105587306|105587596 hsa-miR-4456 0 1 0
chr14:105587306|105587596 hsa-miR-4492 0 1 0
chr14:105587306|105587596 hsa-miR-4498 0 1 0
chr14:105587306|105587596 hsa-miR-4505 0 1 0
chr14:105587306|105587596 hsa-miR-4510 0 1 0
chr14:105587306|105587596 hsa-miR-4535 1 1 0
chr14:105587306|105587596 hsa-miR-1587 1 1 0
chr14:105587306|105587596 hsa-miR-4658 1 0 0
chr14:105587306|105587596 hsa-miR-4675 0 1 0
chr14:105587306|105587596 hsa-miR-4734 1 0 0
chr14:105587306|105587596 hsa-miR-4739 0 1 0
chr14:105587306|105587596 hsa-miR-4767 1 0 0
chr14:105587306|105587596 hsa-miR-5787 0 1 0
chr14:105587306|105587596 hsa-miR-6085 1 0 0
chr14:105587306|105587596 hsa-miR-6127 0 1 0
chr14:105587306|105587596 hsa-miR-6133 0 1 0
chr14:105587306|105587596 hsa-miR-6860 1 1 0
chr14:105587306|105587596 hsa-miR-7974 0 1 0
chr14:105587306|105587596 hsa-miR-9899 1 0 0
chr14:105587306|105587596 hsa-miR-12115 1 0 0
chr14:105587306|105587596 hsa-miR-6840-3p 0 1 0
chr14:105587306|105587596 hsa-miR-7106-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6894-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6510-5p 1 1 0
chr14:105587306|105587596 hsa-miR-5187-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6515-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6089 1 0 0
chr14:105587306|105587596 hsa-miR-4695-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6721-5p 1 1 0
chr14:105587306|105587596 hsa-miR-197-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6716-5p 1 0 0
chr14:105587306|105587596 hsa-miR-3180-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6732-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6805-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6798-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6728-3p 0 1 0
chr14:105587306|105587596 hsa-miR-5008-5p 1 0 0
chr14:105587306|105587596 hsa-miR-5006-5p 0 1 0
chr14:105587306|105587596 hsa-miR-7109-5p 0 1 0
chr14:105587306|105587596 hsa-miR-4763-5p 0 1 0
chr14:105587306|105587596 hsa-miR-3944-3p 1 0 0
chr14:105587306|105587596 hsa-miR-1229-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6753-5p 1 1 0
chr14:105587306|105587596 hsa-miR-296-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6823-5p 0 1 0
chr14:105587306|105587596 hsa-miR-3677-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6749-5p 1 0 0
chr14:105587306|105587596 hsa-miR-4743-5p 1 1 0
chr14:105587306|105587596 hsa-miR-149-3p 0 1 0
chr14:105587306|105587596 hsa-miR-937-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6781-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6769a-3p 0 1 0
chr14:105587306|105587596 hsa-miR-6877-5p 1 0 0
chr14:105587306|105587596 hsa-miR-5010-5p 0 1 0
chr14:105587306|105587596 hsa-miR-3189-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6828-3p 0 1 0
chr14:105587306|105587596 hsa-miR-1251-3p 0 1 0
chr14:105587306|105587596 hsa-miR-6832-5p 0 1 0
chr14:105587306|105587596 hsa-miR-2276-5p 0 1 0
chr14:105587306|105587596 hsa-miR-1296-5p 1 0 0
chr14:105587306|105587596 hsa-miR-5088-3p 1 0 0
chr14:105587306|105587596 hsa-miR-4749-3p 0 1 0
chr14:105587306|105587596 hsa-miR-1296-3p 0 1 0
chr14:105587306|105587596 hsa-miR-4712-3p 0 1 0
chr14:105587306|105587596 hsa-miR-4763-3p 1 1 0
chr14:105587306|105587596 hsa-miR-6778-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6787-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6812-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6816-5p 1 0 0
chr14:105587306|105587596 hsa-miR-5001-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6752-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6803-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6813-5p 1 0 0
chr14:105587306|105587596 hsa-miR-11181-3p 0 1 0
chr14:105587306|105587596 hsa-miR-1249-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6722-3p 1 1 0
chr14:105587306|105587596 hsa-miR-6774-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6779-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6780a-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6797-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6808-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6879-5p 1 1 0
chr14:105587306|105587596 hsa-miR-7111-5p 0 1 0
chr14:105587306|105587596 hsa-miR-3620-5p 1 1 0
chr14:105587306|105587596 hsa-miR-4728-5p 0 1 0
chr14:105587306|105587596 hsa-miR-5189-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6836-5p 1 1 0
chr14:105587306|105587596 hsa-miR-10396a-5p 1 0 0
chr14:105587306|105587596 hsa-miR-1909-3p 1 0 0
chr14:105587306|105587596 hsa-miR-328-5p 1 1 0
chr14:105587306|105587596 hsa-miR-4685-5p 0 1 0
chr14:105587306|105587596 hsa-miR-4726-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6738-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6794-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6846-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6848-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6858-5p 1 0 0
chr14:105587306|105587596 hsa-miR-3187-5p 0 1 0
chr14:105587306|105587596 hsa-miR-6885-5p 1 0 0
chr14:105587306|105587596 hsa-miR-939-5p 1 0 0
chr14:105587306|105587596 hsa-miR-10394-3p 1 0 0
chr14:105587306|105587596 hsa-miR-10396a-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6731-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6724-5p 1 0 0
chr14:105587306|105587596 hsa-miR-6791-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6805-3p 1 0 0
chr14:105587306|105587596 hsa-miR-6837-5p 1 1 0
chr14:105587306|105587596 hsa-miR-330-5p 1 1 0
chr14:105587306|105587596 hsa-miR-6824-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:105587306|105587596
ORF Type ORF1
Protein Length 52
Nucleotide Length 159
Protein Sequence MKTPLTANITKSGGSRPCSGPCSVLWFAKHIPGLPPPSQSWAPVLMPSTEGN
Nucleotide Sequence TTGAAGACCCCACTAACCGCCAACATCACAAAATCCGGTGGGTCCAGACCCTGCTCGGGGCCCTGCTCAGTGCTCTGGTTTGCAAAGCATATTCCCGGCCTGCCTCCTCCCTCCCAATCCTGGGCTCCAGTGCTCATGCCAAGTACAGAGGGAAACTGA
CircID chr14:105587306|105587596
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MRGQDTAQGAHQSRGALSSPAQPPDLALYPPGNTFRPEVH
Nucleotide Sequence CTGAGGGGCCAGGACACAGCCCAGGGTGCCCACCAGAGCAGAGGGGCTCTCTCATCCCCTGCCCAGCCCCCTGACCTGGCTCTCTACCCTCCAGGAAACACATTCCGGCCCGAGGTCCAC
CircID chr14:105587306|105587596
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MQSIFPACLLPPNPGLQCSCQVQRETEAG
Nucleotide Sequence TTGCAAAGCATATTCCCGGCCTGCCTCCTCCCTCCCAATCCTGGGCTCCAGTGCTCATGCCAAGTACAGAGGGAAACTGAGGCAGGCTGA
CircID chr14:105587306|105587596
ORF Type ORF4
Protein Length 62
Nucleotide Length 189
Protein Sequence MLGALLSALVCKAYSRPASSLPILGSSAHAKYRGKLRQAEGPGHSPGCPPEQRGSLIPCPAP
Nucleotide Sequence CTGCTCGGGGCCCTGCTCAGTGCTCTGGTTTGCAAAGCATATTCCCGGCCTGCCTCCTCCCTCCCAATCCTGGGCTCCAGTGCTCATGCCAAGTACAGAGGGAAACTGAGGCAGGCTGAGGGGCCAGGACACAGCCCAGGGTGCCCACCAGAGCAGAGGGGCTCTCTCATCCCCTGCCCAGCCCCCTGA
CircID chr14:105587306|105587596
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MVGTLGCVLAPQPASVSLCTWHEHWSPGLGGRRQAGNMLCKPEH
Nucleotide Sequence CTGGTGGGCACCCTGGGCTGTGTCCTGGCCCCTCAGCCTGCCTCAGTTTCCCTCTGTACTTGGCATGAGCACTGGAGCCCAGGATTGGGAGGGAGGAGGCAGGCCGGGAATATGCTTTGCAAACCAGAGCACTGA
CircID chr14:105587306|105587596
ORF Type ORF6
Protein Length 70
Nucleotide Length 210
Protein Sequence MLWWAPWAVSWPLSLPQFPSVLGMSTGAQDWEGGGRPGICFANQSTEQGPEQGLDPPDFVMLAVSGVFNS
Nucleotide Sequence CTGCTCTGGTGGGCACCCTGGGCTGTGTCCTGGCCCCTCAGCCTGCCTCAGTTTCCCTCTGTACTTGGCATGAGCACTGGAGCCCAGGATTGGGAGGGAGGAGGCAGGCCGGGAATATGCTTTGCAAACCAGAGCACTGAGCAGGGCCCCGAGCAGGGTCTGGACCCACCGGATTTTGTGATGTTGGCGGTTAGTGGGGTCTTCAACTCG
CircID chr14:105587306|105587596
ORF Type ORF7
Protein Length 44
Nucleotide Length 135
Protein Sequence MCFLEGREPGQGAGQGMREPLCSGGHPGLCPGPSACLSFPLYLA
Nucleotide Sequence ATGTGTTTCCTGGAGGGTAGAGAGCCAGGTCAGGGGGCTGGGCAGGGGATGAGAGAGCCCCTCTGCTCTGGTGGGCACCCTGGGCTGTGTCCTGGCCCCTCAGCCTGCCTCAGTTTCCCTCTGTACTTGGCATGA
CircID chr14:105587306|105587596
ORF Type ORF8
Protein Length 34
Nucleotide Length 105
Protein Sequence MEPRIGREEAGREYALQTRALSRAPSRVWTHRIL
Nucleotide Sequence CTGGAGCCCAGGATTGGGAGGGAGGAGGCAGGCCGGGAATATGCTTTGCAAACCAGAGCACTGAGCAGGGCCCCGAGCAGGGTCTGGACCCACCGGATTTTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab