CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105707796|105707917
Strand +
CircType exon
Host Gene ENSG00000211895.4;
Algorism CIRI2;
Sequence CTCTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTGCCTACCCCGAGTCCAAGACCCCGCTAACCGCCACCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105707796|105707917 hsa-miR-15a-5p 0 0 1
chr14:105707796|105707917 hsa-miR-15a-3p 0 0 1
chr14:105707796|105707917 hsa-miR-148a-5p 0 0 1
chr14:105707796|105707917 hsa-miR-148a-3p 0 0 1
chr14:105707796|105707917 hsa-miR-15b-5p 0 0 1
chr14:105707796|105707917 hsa-miR-15b-3p 0 0 1
chr14:105707796|105707917 hsa-miR-130a-5p 0 0 1
chr14:105707796|105707917 hsa-miR-130a-3p 0 0 1
chr14:105707796|105707917 hsa-miR-152-5p 0 0 1
chr14:105707796|105707917 hsa-miR-152-3p 0 0 1
chr14:105707796|105707917 hsa-miR-195-5p 0 0 1
chr14:105707796|105707917 hsa-miR-195-3p 0 0 1
chr14:105707796|105707917 hsa-miR-301a-5p 0 0 1
chr14:105707796|105707917 hsa-miR-301a-3p 0 0 1
chr14:105707796|105707917 hsa-miR-130b-5p 0 0 1
chr14:105707796|105707917 hsa-miR-130b-3p 0 0 1
chr14:105707796|105707917 hsa-miR-148b-5p 0 0 1
chr14:105707796|105707917 hsa-miR-148b-3p 0 0 1
chr14:105707796|105707917 hsa-miR-424-5p 0 0 1
chr14:105707796|105707917 hsa-miR-424-3p 0 0 1
chr14:105707796|105707917 hsa-miR-493-5p 0 0 1
chr14:105707796|105707917 hsa-miR-493-3p 0 0 1
chr14:105707796|105707917 hsa-miR-432-5p 0 0 1
chr14:105707796|105707917 hsa-miR-432-3p 0 0 1
chr14:105707796|105707917 hsa-miR-497-5p 0 0 1
chr14:105707796|105707917 hsa-miR-497-3p 0 0 1
chr14:105707796|105707917 hsa-miR-503-5p 0 0 1
chr14:105707796|105707917 hsa-miR-503-3p 0 0 1
chr14:105707796|105707917 hsa-miR-646 0 0 1
chr14:105707796|105707917 hsa-miR-454-5p 0 0 1
chr14:105707796|105707917 hsa-miR-454-3p 0 0 1
chr14:105707796|105707917 hsa-miR-301b-5p 0 0 1
chr14:105707796|105707917 hsa-miR-301b-3p 0 0 1
chr14:105707796|105707917 hsa-miR-940 0 0 1
chr14:105707796|105707917 hsa-miR-1286 0 0 1
chr14:105707796|105707917 hsa-miR-1197 0 0 1
chr14:105707796|105707917 hsa-miR-193a-5p 1 0 1
chr14:105707796|105707917 hsa-miR-16 0 0 1
chr14:105707796|105707917 hsa-miR-1269 0 0 1
chr14:105707796|105707917 hsa-miR-608 1 0 0
chr14:105707796|105707917 hsa-miR-663a 1 0 0
chr14:105707796|105707917 hsa-miR-762 1 0 0
chr14:105707796|105707917 hsa-miR-1182 1 0 0
chr14:105707796|105707917 hsa-miR-1469 1 0 0
chr14:105707796|105707917 hsa-miR-3147 1 0 0
chr14:105707796|105707917 hsa-miR-378c 0 1 0
chr14:105707796|105707917 hsa-miR-4259 1 0 0
chr14:105707796|105707917 hsa-miR-3651 1 0 0
chr14:105707796|105707917 hsa-miR-3654 0 1 0
chr14:105707796|105707917 hsa-miR-3666 0 1 0
chr14:105707796|105707917 hsa-miR-3714 1 1 0
chr14:105707796|105707917 hsa-miR-3937 1 0 0
chr14:105707796|105707917 hsa-miR-4450 1 0 0
chr14:105707796|105707917 hsa-miR-4467 1 0 0
chr14:105707796|105707917 hsa-miR-4651 1 0 0
chr14:105707796|105707917 hsa-miR-4674 1 0 0
chr14:105707796|105707917 hsa-miR-4706 1 0 0
chr14:105707796|105707917 hsa-miR-6081 1 0 0
chr14:105707796|105707917 hsa-miR-6745 1 0 0
chr14:105707796|105707917 hsa-miR-7704 1 0 0
chr14:105707796|105707917 hsa-miR-7155-5p 1 0 0
chr14:105707796|105707917 hsa-miR-218-2-3p 0 1 0
chr14:105707796|105707917 hsa-miR-6861-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6720-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6799-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6880-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6890-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6820-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6727-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6806-5p 1 1 0
chr14:105707796|105707917 hsa-miR-197-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6742-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6793-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6796-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6881-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6782-5p 1 0 0
chr14:105707796|105707917 hsa-miR-615-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6835-5p 1 0 0
chr14:105707796|105707917 hsa-miR-193b-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4691-3p 0 1 0
chr14:105707796|105707917 hsa-miR-885-3p 1 1 0
chr14:105707796|105707917 hsa-miR-1228-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4638-3p 1 1 0
chr14:105707796|105707917 hsa-miR-103b 0 1 0
chr14:105707796|105707917 hsa-miR-7112-5p 1 0 0
chr14:105707796|105707917 hsa-miR-654-5p 1 1 0
chr14:105707796|105707917 hsa-miR-5000-3p 0 1 0
chr14:105707796|105707917 hsa-miR-744-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6868-5p 1 1 0
chr14:105707796|105707917 hsa-miR-3177-3p 1 1 0
chr14:105707796|105707917 hsa-miR-10400-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4763-3p 1 0 0
chr14:105707796|105707917 hsa-miR-6787-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6816-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6893-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6756-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6815-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6851-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6808-5p 1 0 0
chr14:105707796|105707917 hsa-miR-5189-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6780b-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6836-5p 1 1 0
chr14:105707796|105707917 hsa-miR-10396a-5p 1 0 0
chr14:105707796|105707917 hsa-miR-10396b-5p 1 0 0
chr14:105707796|105707917 hsa-miR-1237-5p 1 0 0
chr14:105707796|105707917 hsa-miR-328-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4632-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4725-3p 1 0 0
chr14:105707796|105707917 hsa-miR-4745-5p 1 0 0
chr14:105707796|105707917 hsa-miR-4749-5p 1 0 0
chr14:105707796|105707917 hsa-miR-3187-5p 1 1 0
chr14:105707796|105707917 hsa-miR-4758-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6511a-5p 1 0 0
chr14:105707796|105707917 hsa-miR-1914-3p 1 0 0
chr14:105707796|105707917 hsa-miR-6766-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6724-5p 1 0 0
chr14:105707796|105707917 hsa-miR-10400-3p 1 0 0
chr14:105707796|105707917 hsa-miR-3619-5p 1 0 0
chr14:105707796|105707917 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:105707796|105707917
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPGCAEPWNHGKTFTCTAAYPESKTPLTAT
Nucleotide Sequence CTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTGCCTACCCCGAGTCCAAGACCCCGCTAACCGCCACC
CircID chr14:105707796|105707917
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence LWLLQRVQCPAGLCRAMEPWEDLHLHCCLPRVQDPANRHP
Nucleotide Sequence CTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTGCCTACCCCGAGTCCAAGACCCCGCTAACCGCCACCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab