CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105707832|105708101
Strand +
CircType exon
Host Gene ENSG00000211895.4;
Algorism CIRI2;
Sequence CCCATCTCCCTCATGCTGCCACCCCCGACTGTCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105707832|105708101 hsa-miR-15a-5p 0 0 1
chr14:105707832|105708101 hsa-miR-15a-3p 0 0 1
chr14:105707832|105708101 hsa-miR-107 0 0 1
chr14:105707832|105708101 hsa-miR-148a-5p 0 0 1
chr14:105707832|105708101 hsa-miR-148a-3p 0 0 1
chr14:105707832|105708101 hsa-miR-15b-5p 0 0 1
chr14:105707832|105708101 hsa-miR-15b-3p 0 0 1
chr14:105707832|105708101 hsa-miR-130a-5p 0 0 1
chr14:105707832|105708101 hsa-miR-130a-3p 0 0 1
chr14:105707832|105708101 hsa-miR-152-5p 0 0 1
chr14:105707832|105708101 hsa-miR-152-3p 0 0 1
chr14:105707832|105708101 hsa-miR-195-5p 0 0 1
chr14:105707832|105708101 hsa-miR-195-3p 0 0 1
chr14:105707832|105708101 hsa-miR-301a-5p 0 0 1
chr14:105707832|105708101 hsa-miR-301a-3p 0 0 1
chr14:105707832|105708101 hsa-miR-130b-5p 0 0 1
chr14:105707832|105708101 hsa-miR-130b-3p 0 0 1
chr14:105707832|105708101 hsa-miR-148b-5p 0 0 1
chr14:105707832|105708101 hsa-miR-148b-3p 0 0 1
chr14:105707832|105708101 hsa-miR-424-5p 0 0 1
chr14:105707832|105708101 hsa-miR-424-3p 0 0 1
chr14:105707832|105708101 hsa-miR-493-5p 0 0 1
chr14:105707832|105708101 hsa-miR-493-3p 0 0 1
chr14:105707832|105708101 hsa-miR-497-5p 0 0 1
chr14:105707832|105708101 hsa-miR-497-3p 0 0 1
chr14:105707832|105708101 hsa-miR-503-5p 0 0 1
chr14:105707832|105708101 hsa-miR-503-3p 0 0 1
chr14:105707832|105708101 hsa-miR-608 1 1 1
chr14:105707832|105708101 hsa-miR-646 0 0 1
chr14:105707832|105708101 hsa-miR-648 0 0 1
chr14:105707832|105708101 hsa-miR-454-5p 0 0 1
chr14:105707832|105708101 hsa-miR-454-3p 0 0 1
chr14:105707832|105708101 hsa-miR-301b-5p 0 0 1
chr14:105707832|105708101 hsa-miR-301b-3p 0 0 1
chr14:105707832|105708101 hsa-miR-1236-5p 0 0 1
chr14:105707832|105708101 hsa-miR-1236-3p 0 0 1
chr14:105707832|105708101 hsa-miR-1286 0 0 1
chr14:105707832|105708101 hsa-miR-1294 0 1 1
chr14:105707832|105708101 hsa-miR-1250-5p 0 0 1
chr14:105707832|105708101 hsa-miR-1250-3p 0 0 1
chr14:105707832|105708101 hsa-miR-1266-5p 0 0 1
chr14:105707832|105708101 hsa-miR-1266-3p 0 0 1
chr14:105707832|105708101 hsa-miR-1197 0 0 1
chr14:105707832|105708101 hsa-miR-1827 0 0 1
chr14:105707832|105708101 hsa-miR-125a-3p 0 0 1
chr14:105707832|105708101 hsa-miR-885-3p 0 0 1
chr14:105707832|105708101 hsa-miR-188-3p 0 0 1
chr14:105707832|105708101 hsa-miR-574-3p 0 0 1
chr14:105707832|105708101 hsa-miR-542-3p 0 0 1
chr14:105707832|105708101 hsa-miR-1260 0 0 1
chr14:105707832|105708101 hsa-miR-323-5p 0 0 1
chr14:105707832|105708101 hsa-miR-103 0 0 1
chr14:105707832|105708101 hsa-miR-16 0 0 1
chr14:105707832|105708101 hsa-miR-650 1 0 0
chr14:105707832|105708101 hsa-miR-762 1 0 0
chr14:105707832|105708101 hsa-miR-1293 1 0 0
chr14:105707832|105708101 hsa-miR-1268a 1 0 0
chr14:105707832|105708101 hsa-miR-1469 1 0 0
chr14:105707832|105708101 hsa-miR-1471 1 0 0
chr14:105707832|105708101 hsa-miR-3196 1 0 0
chr14:105707832|105708101 hsa-miR-4253 1 0 0
chr14:105707832|105708101 hsa-miR-3621 1 0 0
chr14:105707832|105708101 hsa-miR-3654 0 1 0
chr14:105707832|105708101 hsa-miR-3666 0 1 0
chr14:105707832|105708101 hsa-miR-3909 1 0 0
chr14:105707832|105708101 hsa-miR-1268b 1 0 0
chr14:105707832|105708101 hsa-miR-4440 1 0 0
chr14:105707832|105708101 hsa-miR-4466 1 0 0
chr14:105707832|105708101 hsa-miR-4467 1 0 0
chr14:105707832|105708101 hsa-miR-4488 1 0 0
chr14:105707832|105708101 hsa-miR-4498 1 0 0
chr14:105707832|105708101 hsa-miR-4508 1 0 0
chr14:105707832|105708101 hsa-miR-1587 1 0 0
chr14:105707832|105708101 hsa-miR-3960 1 0 0
chr14:105707832|105708101 hsa-miR-4651 1 0 0
chr14:105707832|105708101 hsa-miR-4721 1 1 0
chr14:105707832|105708101 hsa-miR-5572 1 0 0
chr14:105707832|105708101 hsa-miR-6081 1 0 0
chr14:105707832|105708101 hsa-miR-6127 0 1 0
chr14:105707832|105708101 hsa-miR-6129 0 1 0
chr14:105707832|105708101 hsa-miR-9900 0 1 0
chr14:105707832|105708101 hsa-miR-203a-5p 0 1 0
chr14:105707832|105708101 hsa-miR-4731-5p 1 0 0
chr14:105707832|105708101 hsa-miR-323a-5p 1 1 0
chr14:105707832|105708101 hsa-miR-6747-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6765-5p 1 0 0
chr14:105707832|105708101 hsa-miR-218-2-3p 0 1 0
chr14:105707832|105708101 hsa-miR-6804-5p 1 1 0
chr14:105707832|105708101 hsa-miR-6089 1 0 0
chr14:105707832|105708101 hsa-miR-6880-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6727-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6748-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6772-5p 1 0 0
chr14:105707832|105708101 hsa-miR-185-3p 1 0 0
chr14:105707832|105708101 hsa-miR-6732-5p 1 1 0
chr14:105707832|105708101 hsa-miR-6782-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6786-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6835-5p 1 0 0
chr14:105707832|105708101 hsa-miR-1226-5p 1 1 0
chr14:105707832|105708101 hsa-miR-4691-3p 0 1 0
chr14:105707832|105708101 hsa-miR-4743-5p 1 0 0
chr14:105707832|105708101 hsa-miR-4787-5p 1 1 0
chr14:105707832|105708101 hsa-miR-4638-3p 1 1 0
chr14:105707832|105708101 hsa-miR-4446-3p 1 0 0
chr14:105707832|105708101 hsa-miR-6789-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6781-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6877-5p 1 0 0
chr14:105707832|105708101 hsa-miR-103b 0 1 0
chr14:105707832|105708101 hsa-miR-5000-3p 0 1 0
chr14:105707832|105708101 hsa-miR-6868-5p 0 1 0
chr14:105707832|105708101 hsa-miR-4649-3p 0 1 0
chr14:105707832|105708101 hsa-miR-3177-3p 0 1 0
chr14:105707832|105708101 hsa-miR-6812-3p 0 1 0
chr14:105707832|105708101 hsa-miR-3680-3p 1 0 0
chr14:105707832|105708101 hsa-miR-10400-5p 1 0 0
chr14:105707832|105708101 hsa-miR-4763-3p 1 0 0
chr14:105707832|105708101 hsa-miR-6787-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6812-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6865-5p 1 1 0
chr14:105707832|105708101 hsa-miR-5001-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6737-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6743-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6752-5p 1 1 0
chr14:105707832|105708101 hsa-miR-6756-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6803-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6815-5p 0 1 0
chr14:105707832|105708101 hsa-miR-6819-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6842-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6851-5p 1 1 0
chr14:105707832|105708101 hsa-miR-7110-5p 1 1 0
chr14:105707832|105708101 hsa-miR-6751-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6879-5p 1 0 0
chr14:105707832|105708101 hsa-miR-7111-5p 1 0 0
chr14:105707832|105708101 hsa-miR-3620-5p 1 0 0
chr14:105707832|105708101 hsa-miR-5189-5p 1 0 0
chr14:105707832|105708101 hsa-miR-6836-5p 0 1 0
chr14:105707832|105708101 hsa-miR-1237-5p 1 0 0
chr14:105707832|105708101 hsa-miR-328-5p 1 0 0
chr14:105707832|105708101 hsa-miR-449c-5p 1 0 0
chr14:105707832|105708101 hsa-miR-4632-5p 1 0 0
chr14:105707832|105708101 hsa-miR-4472 1 0 0
chr14:105707832|105708101 hsa-miR-6766-5p 1 0 0
chr14:105707832|105708101 hsa-miR-3622a-3p 0 1 0
chr14:105707832|105708101 hsa-miR-3619-5p 1 0 0
chr14:105707832|105708101 hsa-miR-3622b-3p 0 1 0
chr14:105707832|105708101 hsa-miR-370-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:105707832|105708101
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MLPPPTVTAPTGPRGPALRFRSEPHVHTDRPERCLRCHLHLDALKWEERCSRTT
Nucleotide Sequence ATGCTGCCACCCCCGACTGTCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGA
CircID chr14:105707832|105708101
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MWLLQRVQCPAGLCRAMEPWEDLHLHCC
Nucleotide Sequence CTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTGC
CircID chr14:105707832|105708101
ORF Type ORF3
Protein Length 80
Nucleotide Length 240
Protein Sequence MSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA
Nucleotide Sequence CTGTCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCT
CircID chr14:105707832|105708101
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MPQVSPSPGRPQVGRALFKDHLSVTSVAATACPVSCRAVPSHGTMGRPSLALL
Nucleotide Sequence ATGCCTCAGGTGTCACCTTCACCTGGACGCCCTCAAGTGGGAAGAGCGCTGTTCAAGGACCACCTGAGCGTGACCTCTGTGGCTGCTACAGCGTGTCCAGTGTCCTGCCGGGCTGTGCCGAGCCATGGAACCATGGGAAGACCTTCACTTGCACTGCTG
CircID chr14:105707832|105708101
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MARHSPAGHWTRCSSHRGHAQVVLEQRSSHLRASR
Nucleotide Sequence ATGGCTCGGCACAGCCCGGCAGGACACTGGACACGCTGTAGCAGCCACAGAGGTCACGCTCAGGTGGTCCTTGAACAGCGCTCTTCCCACTTGAGGGCGTCCAGGTGA
CircID chr14:105707832|105708101
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MVPWLGTARQDTGHAVAATEVTLRWSLNSALPT
Nucleotide Sequence ATGGTTCCATGGCTCGGCACAGCCCGGCAGGACACTGGACACGCTGTAGCAGCCACAGAGGTCACGCTCAGGTGGTCCTTGAACAGCGCTCTTCCCACTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab