CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105741491|105741780
Strand +
CircType exon
Host Gene ENSG00000211896.5;
Algorism CIRI2;
Sequence CACAGGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTTCTCATGCTCCGTGATGCATGAGGCTCTGCACAACCACTACACACAGAAGAGCCTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105741491|105741780 hsa-miR-150-5p 0 0 1
chr14:105741491|105741780 hsa-miR-150-3p 0 0 1
chr14:105741491|105741780 hsa-miR-370-5p 0 0 1
chr14:105741491|105741780 hsa-miR-370-3p 0 0 1
chr14:105741491|105741780 hsa-miR-484 0 0 1
chr14:105741491|105741780 hsa-miR-631 0 0 1
chr14:105741491|105741780 hsa-miR-643 0 0 1
chr14:105741491|105741780 hsa-miR-877-5p 0 0 1
chr14:105741491|105741780 hsa-miR-877-3p 0 0 1
chr14:105741491|105741780 hsa-miR-940 0 0 1
chr14:105741491|105741780 hsa-miR-1253 0 1 1
chr14:105741491|105741780 hsa-miR-140-5p 0 0 1
chr14:105741491|105741780 hsa-miR-486-3p 0 0 1
chr14:105741491|105741780 hsa-miR-532-3p 0 1 1
chr14:105741491|105741780 hsa-miR-1289 0 1 1
chr14:105741491|105741780 hsa-miR-331-3p 0 0 1
chr14:105741491|105741780 hsa-miR-338-3p 0 0 1
chr14:105741491|105741780 hsa-miR-1207-5p 1 0 1
chr14:105741491|105741780 hsa-miR-142-3p 0 0 1
chr14:105741491|105741780 hsa-miR-1300 0 0 1
chr14:105741491|105741780 hsa-miR-453 0 0 1
chr14:105741491|105741780 hsa-miR-608 1 0 0
chr14:105741491|105741780 hsa-miR-637 1 0 0
chr14:105741491|105741780 hsa-miR-762 1 0 0
chr14:105741491|105741780 hsa-miR-1268a 1 0 0
chr14:105741491|105741780 hsa-miR-3125 0 1 0
chr14:105741491|105741780 hsa-miR-3182 0 1 0
chr14:105741491|105741780 hsa-miR-3185 0 1 0
chr14:105741491|105741780 hsa-miR-3188 1 0 0
chr14:105741491|105741780 hsa-miR-4281 1 0 0
chr14:105741491|105741780 hsa-miR-3661 0 1 0
chr14:105741491|105741780 hsa-miR-3916 0 1 0
chr14:105741491|105741780 hsa-miR-1268b 1 0 0
chr14:105741491|105741780 hsa-miR-4443 1 0 0
chr14:105741491|105741780 hsa-miR-4460 0 1 0
chr14:105741491|105741780 hsa-miR-4478 0 1 0
chr14:105741491|105741780 hsa-miR-3689c 1 1 0
chr14:105741491|105741780 hsa-miR-4488 1 0 0
chr14:105741491|105741780 hsa-miR-2392 1 0 0
chr14:105741491|105741780 hsa-miR-4512 0 1 0
chr14:105741491|105741780 hsa-miR-4514 0 1 0
chr14:105741491|105741780 hsa-miR-4651 1 0 0
chr14:105741491|105741780 hsa-miR-4673 0 1 0
chr14:105741491|105741780 hsa-miR-4688 1 0 0
chr14:105741491|105741780 hsa-miR-4710 1 0 0
chr14:105741491|105741780 hsa-miR-4736 0 1 0
chr14:105741491|105741780 hsa-miR-5090 1 0 0
chr14:105741491|105741780 hsa-miR-5092 0 1 0
chr14:105741491|105741780 hsa-miR-5787 1 0 0
chr14:105741491|105741780 hsa-miR-6079 0 1 0
chr14:105741491|105741780 hsa-miR-7106-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6894-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6799-5p 1 0 0
chr14:105741491|105741780 hsa-miR-139-3p 0 1 0
chr14:105741491|105741780 hsa-miR-3622a-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6757-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6880-5p 1 0 0
chr14:105741491|105741780 hsa-miR-7847-3p 1 1 0
chr14:105741491|105741780 hsa-miR-6762-3p 0 1 0
chr14:105741491|105741780 hsa-miR-6727-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6871-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6805-5p 1 0 0
chr14:105741491|105741780 hsa-miR-2467-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6782-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6810-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6882-3p 0 1 0
chr14:105741491|105741780 hsa-miR-4713-5p 0 1 0
chr14:105741491|105741780 hsa-miR-6786-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6835-5p 1 0 0
chr14:105741491|105741780 hsa-miR-7109-5p 1 0 0
chr14:105741491|105741780 hsa-miR-3944-3p 0 1 0
chr14:105741491|105741780 hsa-miR-4783-3p 1 0 0
chr14:105741491|105741780 hsa-miR-6771-5p 1 0 0
chr14:105741491|105741780 hsa-miR-149-3p 1 0 0
chr14:105741491|105741780 hsa-miR-6717-5p 0 1 0
chr14:105741491|105741780 hsa-miR-7112-5p 0 1 0
chr14:105741491|105741780 hsa-miR-1911-3p 0 1 0
chr14:105741491|105741780 hsa-miR-208a-5p 0 1 0
chr14:105741491|105741780 hsa-miR-4703-3p 0 1 0
chr14:105741491|105741780 hsa-miR-2114-3p 0 1 0
chr14:105741491|105741780 hsa-miR-6773-3p 0 1 0
chr14:105741491|105741780 hsa-miR-2277-5p 1 0 0
chr14:105741491|105741780 hsa-miR-1273h-5p 1 0 0
chr14:105741491|105741780 hsa-miR-3689b-3p 1 1 0
chr14:105741491|105741780 hsa-miR-4763-3p 1 0 0
chr14:105741491|105741780 hsa-miR-6816-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6893-5p 0 1 0
chr14:105741491|105741780 hsa-miR-6743-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6756-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6803-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6842-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6751-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6779-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6808-5p 0 1 0
chr14:105741491|105741780 hsa-miR-5196-5p 1 0 0
chr14:105741491|105741780 hsa-miR-1237-5p 1 0 0
chr14:105741491|105741780 hsa-miR-328-5p 1 0 0
chr14:105741491|105741780 hsa-miR-3689a-3p 1 1 0
chr14:105741491|105741780 hsa-miR-4649-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6729-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6846-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6848-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6883-5p 1 0 0
chr14:105741491|105741780 hsa-miR-4697-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6885-5p 1 0 0
chr14:105741491|105741780 hsa-miR-939-5p 1 0 0
chr14:105741491|105741780 hsa-miR-4665-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6766-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6785-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6893-3p 0 1 0
chr14:105741491|105741780 hsa-miR-6810-3p 0 1 0
chr14:105741491|105741780 hsa-miR-4756-5p 1 0 0
chr14:105741491|105741780 hsa-miR-6859-5p 0 1 0
chr14:105741491|105741780 hsa-miR-619-5p 0 1 0
chr14:105741491|105741780 hsa-miR-7156-5p 0 1 0
chr14:105741491|105741780 hsa-miR-433-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:105741491|105741780
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MGSRRTTTRPRLPCWTPTAPSSSTASSPWTRAGGSRGTSSHAP
Nucleotide Sequence ATGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTTCTCATGCTCCGTGA
CircID chr14:105741491|105741780
ORF Type ORF2
Protein Length 63
Nucleotide Length 192
Protein Sequence MPGQRLLSQRHRRGVGEQWAAGEQLQDHASRAGLRRLLLPLQQAHRGQEQVAAGERLLMLRDA
Nucleotide Sequence CTGCCTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTTCTCATGCTCCGTGATGCATGA
CircID chr14:105741491|105741780
ORF Type ORF3
Protein Length 92
Nucleotide Length 276
Protein Sequence MPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLS
Nucleotide Sequence CTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTTCTCATGCTCCGTGATGCATGAGGCTCTGCACAACCACTACACACAGAAGAGCCTCTCC
CircID chr14:105741491|105741780
ORF Type ORF4
Protein Length 73
Nucleotide Length 219
Protein Sequence MLPPALVHGELAVEEEGAVGVQHGRRGLVVVLRLPIALPLHGDVAGIEAFDQAGQADLVLGQLIPGWGQGVHL
Nucleotide Sequence CTGCTGCCACCTGCTCTTGTCCACGGTGAGCTTGCTGTAGAGGAAGAAGGAGCCGTCGGAGTCCAGCACGGGAGGCGTGGTCTTGTAGTTGTTCTCCGGCTGCCCATTGCTCTCCCACTCCACGGCGATGTCGCTGGGATAGAAGCCTTTGACCAGGCAGGTCAGGCTGACCTGGTTCTTGGTCAGCTCATCCCGGGATGGGGGCAGGGTGTACACCTG
CircID chr14:105741491|105741780
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MCRASCITEHEKTFPCCHLLLSTVSLL
Nucleotide Sequence TTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACGTTCCCCTGCTGCCACCTGCTCTTGTCCACGGTGAGCTTGCTGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab