CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105741975|105742219
Strand +
CircType exon
Host Gene ENSG00000211896.5;
Algorism CIRI2;
Sequence CTGAACTCCTGGGGGGACCGTCAGTCTTCCTCTTCCCCCCAAAACCCAAGGACACCCTCATGATCTCCCGGACCCCTGAGGTCACATGCGTGGTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGTGGACGGCGTGGAGGTGCATAATGCCAAGACAAAGCCGCGGGAGGAGCAGTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGGACTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105741975|105742219 hsa-miR-192-5p 0 0 1
chr14:105741975|105742219 hsa-miR-192-3p 0 0 1
chr14:105741975|105742219 hsa-miR-215-5p 0 0 1
chr14:105741975|105742219 hsa-miR-215-3p 0 0 1
chr14:105741975|105742219 hsa-miR-431-5p 0 0 1
chr14:105741975|105742219 hsa-miR-431-3p 0 0 1
chr14:105741975|105742219 hsa-miR-511-5p 0 0 1
chr14:105741975|105742219 hsa-miR-511-3p 0 0 1
chr14:105741975|105742219 hsa-miR-625-5p 0 0 1
chr14:105741975|105742219 hsa-miR-625-3p 0 0 1
chr14:105741975|105742219 hsa-miR-629-5p 0 0 1
chr14:105741975|105742219 hsa-miR-629-3p 0 0 1
chr14:105741975|105742219 hsa-miR-665 0 0 1
chr14:105741975|105742219 hsa-miR-1182 0 0 1
chr14:105741975|105742219 hsa-miR-1204 0 0 1
chr14:105741975|105742219 hsa-miR-1286 0 0 1
chr14:105741975|105742219 hsa-miR-1256 0 0 1
chr14:105741975|105742219 hsa-miR-1266-5p 0 0 1
chr14:105741975|105742219 hsa-miR-1266-3p 0 0 1
chr14:105741975|105742219 hsa-miR-1275 0 0 1
chr14:105741975|105742219 hsa-miR-1224-5p 0 0 1
chr14:105741975|105742219 hsa-miR-615-5p 0 0 1
chr14:105741975|105742219 hsa-miR-193a-5p 0 1 1
chr14:105741975|105742219 hsa-miR-361-3p 0 1 1
chr14:105741975|105742219 hsa-miR-502-3p 0 0 1
chr14:105741975|105742219 hsa-miR-501-3p 0 0 1
chr14:105741975|105742219 hsa-miR-491-3p 0 0 1
chr14:105741975|105742219 hsa-miR-220b 0 0 1
chr14:105741975|105742219 hsa-miR-7 0 0 1
chr14:105741975|105742219 hsa-miR-24 0 0 1
chr14:105741975|105742219 hsa-miR-1976 1 0 0
chr14:105741975|105742219 hsa-miR-548q 0 1 0
chr14:105741975|105742219 hsa-miR-3125 0 1 0
chr14:105741975|105742219 hsa-miR-4271 0 1 0
chr14:105741975|105742219 hsa-miR-4284 0 1 0
chr14:105741975|105742219 hsa-miR-3916 0 1 0
chr14:105741975|105742219 hsa-miR-4501 0 1 0
chr14:105741975|105742219 hsa-miR-4513 0 1 0
chr14:105741975|105742219 hsa-miR-4518 0 1 0
chr14:105741975|105742219 hsa-miR-4669 1 0 0
chr14:105741975|105742219 hsa-miR-4710 0 1 0
chr14:105741975|105742219 hsa-miR-4739 1 0 0
chr14:105741975|105742219 hsa-miR-5694 0 1 0
chr14:105741975|105742219 hsa-miR-12119 1 0 0
chr14:105741975|105742219 hsa-miR-6749-3p 0 1 0
chr14:105741975|105742219 hsa-miR-132-5p 0 1 0
chr14:105741975|105742219 hsa-miR-6836-3p 1 0 0
chr14:105741975|105742219 hsa-miR-6804-5p 0 1 0
chr14:105741975|105742219 hsa-miR-6746-5p 0 1 0
chr14:105741975|105742219 hsa-miR-770-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6798-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6782-5p 1 0 0
chr14:105741975|105742219 hsa-miR-7109-5p 1 1 0
chr14:105741975|105742219 hsa-miR-193b-5p 0 1 0
chr14:105741975|105742219 hsa-miR-6825-3p 1 0 0
chr14:105741975|105742219 hsa-miR-3189-3p 0 1 0
chr14:105741975|105742219 hsa-miR-873-3p 0 1 0
chr14:105741975|105742219 hsa-miR-1910-5p 0 1 0
chr14:105741975|105742219 hsa-miR-4749-3p 1 0 0
chr14:105741975|105742219 hsa-miR-6767-3p 1 0 0
chr14:105741975|105742219 hsa-miR-4750-3p 1 0 0
chr14:105741975|105742219 hsa-miR-3613-5p 0 1 0
chr14:105741975|105742219 hsa-miR-6870-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6775-5p 1 0 0
chr14:105741975|105742219 hsa-miR-1343-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6803-5p 1 0 0
chr14:105741975|105742219 hsa-miR-7110-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6751-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6797-5p 1 0 0
chr14:105741975|105742219 hsa-miR-7111-5p 1 1 0
chr14:105741975|105742219 hsa-miR-1909-3p 0 1 0
chr14:105741975|105742219 hsa-miR-328-5p 1 0 0
chr14:105741975|105742219 hsa-miR-4649-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6795-5p 1 1 0
chr14:105741975|105742219 hsa-miR-6887-5p 1 1 0
chr14:105741975|105742219 hsa-miR-769-3p 1 0 0
chr14:105741975|105742219 hsa-miR-11181-5p 1 0 0
chr14:105741975|105742219 hsa-miR-6859-5p 0 1 0
chr14:105741975|105742219 hsa-miR-433-5p 0 1 0
chr14:105741975|105742219 hsa-miR-6855-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:105741975|105742219
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MRSSSTGTWTAWRCIMPRQSRGRSSTTARTVWSASSPSCTRT
Nucleotide Sequence CTGAGGTCAAGTTCAACTGGTACGTGGACGGCGTGGAGGTGCATAATGCCAAGACAAAGCCGCGGGAGGAGCAGTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGGACT
CircID chr14:105741975|105742219
ORF Type ORF2
Protein Length 79
Nucleotide Length 237
Protein Sequence MGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW
Nucleotide Sequence CTGGGGGGACCGTCAGTCTTCCTCTTCCCCCCAAAACCCAAGGACACCCTCATGATCTCCCGGACCCCTGAGGTCACATGCGTGGTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGTGGACGGCGTGGAGGTGCATAATGCCAAGACAAAGCCGCGGGAGGAGCAGTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGGACTGG
CircID chr14:105741975|105742219
ORF Type ORF3
Protein Length 72
Nucleotide Length 219
Protein Sequence MVQDGEDADHTVRAVVLLLPRLCLGIMHLHAVHVPVELDLRVFVAHVHHHACDLRGPGDHEGVLGFWGEEED
Nucleotide Sequence CTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGGCTCACGTCCACCACCACGCATGTGACCTCAGGGGTCCGGGAGATCATGAGGGTGTCCTTGGGTTTTGGGGGGAAGAGGAAGACTGA
CircID chr14:105741975|105742219
ORF Type ORF4
Protein Length 72
Nucleotide Length 216
Protein Sequence MTTRYVLLYCSSRGFVLALCTSTPSTYQLNLTSGSSWLTSTTTHVTSGVREIMRVSLGFGGKRKTDGPPRSS
Nucleotide Sequence CTGACCACACGGTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGGCTCACGTCCACCACCACGCATGTGACCTCAGGGGTCCGGGAGATCATGAGGGTGTCCTTGGGTTTTGGGGGGAAGAGGAAGACTGACGGTCCCCCCAGGAGTTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab