CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105854463|105854601
Strand -
CircType exon
Host Gene ENSG00000211899.6;
Algorism CIRI2;
Sequence CACGCAGGTGTAGGTCTCCCCCGTGTTCCATTCCTCTTCGGACACGGTCAGGATGCTGTGGGCGAAGTACCGGCCTGGGGCCTGGGGCTCAGGCATTGGGGCGCTGGTCACATACTTCTCCGGGGACAAGGGCTGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105854463|105854601 hsa-miR-602 0 1 1
chr14:105854463|105854601 hsa-miR-1225-3p 0 1 1
chr14:105854463|105854601 hsa-miR-769-5p 0 0 1
chr14:105854463|105854601 hsa-miR-486-3p 0 1 1
chr14:105854463|105854601 hsa-miR-1233 0 0 1
chr14:105854463|105854601 hsa-miR-129-3p 0 0 1
chr14:105854463|105854601 hsa-miR-1201 0 0 1
chr14:105854463|105854601 hsa-miR-661 0 1 0
chr14:105854463|105854601 hsa-miR-663b 1 0 0
chr14:105854463|105854601 hsa-miR-4298 1 0 0
chr14:105854463|105854601 hsa-miR-4323 0 1 0
chr14:105854463|105854601 hsa-miR-3916 0 1 0
chr14:105854463|105854601 hsa-miR-4449 1 0 0
chr14:105854463|105854601 hsa-miR-4501 0 1 0
chr14:105854463|105854601 hsa-miR-4669 0 1 0
chr14:105854463|105854601 hsa-miR-4433b-3p 1 0 0
chr14:105854463|105854601 hsa-miR-3677-5p 1 0 0
chr14:105854463|105854601 hsa-miR-874-5p 0 1 0
chr14:105854463|105854601 hsa-miR-3189-5p 1 0 0
chr14:105854463|105854601 hsa-miR-7108-5p 1 0 0
chr14:105854463|105854601 hsa-miR-939-3p 0 1 0
chr14:105854463|105854601 hsa-miR-6763-3p 1 0 0
chr14:105854463|105854601 hsa-miR-2277-3p 1 0 0
chr14:105854463|105854601 hsa-miR-4646-3p 1 0 0
chr14:105854463|105854601 hsa-miR-339-3p 0 1 0
chr14:105854463|105854601 hsa-miR-501-5p 1 0 0
chr14:105854463|105854601 hsa-miR-4433b-5p 1 0 0
chr14:105854463|105854601 hsa-miR-6780b-3p 0 1 0
chr14:105854463|105854601 hsa-miR-6505-5p 0 1 0
chr14:105854463|105854601 hsa-miR-6808-3p 0 1 0
chr14:105854463|105854601 hsa-miR-6787-5p 1 0 0
chr14:105854463|105854601 hsa-miR-6885-5p 1 0 0
chr14:105854463|105854601 hsa-miR-10396a-3p 1 1 0
chr14:105854463|105854601 hsa-miR-10396b-3p 1 1 0
chr14:105854463|105854601 hsa-miR-1199-5p 0 1 0
chr14:105854463|105854601 hsa-miR-10398-3p 0 1 0
chr14:105854463|105854601 hsa-miR-6819-3p 1 0 0
chr14:105854463|105854601 hsa-miR-129-1-3p 0 1 0
chr14:105854463|105854601 hsa-miR-129-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:105854463|105854601
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MLWAKYRPGAWGSGIGALVTYFSGDKGCP
Nucleotide Sequence ATGCTGTGGGCGAAGTACCGGCCTGGGGCCTGGGGCTCAGGCATTGGGGCGCTGGTCACATACTTCTCCGGGGACAAGGGCTGCCCC

CircID chr14:105854463|105854601
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCV
Nucleotide Sequence TTGTCCCCGGAGAAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCGAAGAGGAATGGAACACGGGGGAGACCTACACCTGCGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites