CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105854649|105855007
Strand -
CircType exon
Host Gene ENSG00000211899.6;
Algorism CIRI2;
Sequence CAGGCACGTGATGGTGGCCGACTCCCGCAGGTTCAGCTGCTCCCGGGCTGGTGGCAGCAAGTAGACATCGGGCCTGTGCAGGGCCACCCCTGTGAACAGAGATGGTGGTGAGGGCGGGGCAGTGGGGGGACCAGCCTGTGGGCTGGGGTTGAGTCCCCTTTTCCCCAGTTGCCCAGACAACGGGGGAGTGAGGGGTGCTTTCCACCATGCCCCAGAGGCCAAGGGAGGTCCCAGGGAGTGCAGGAAGAGGGGCAAGAGTGGGGCCTACCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTGAACCTCTCCCCGGAATTCCAGTCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105854649|105855007 hsa-miR-27a-5p 0 0 1
chr14:105854649|105855007 hsa-miR-27a-3p 0 0 1
chr14:105854649|105855007 hsa-miR-197-5p 0 0 1
chr14:105854649|105855007 hsa-miR-197-3p 0 0 1
chr14:105854649|105855007 hsa-miR-27b-5p 0 0 1
chr14:105854649|105855007 hsa-miR-27b-3p 0 0 1
chr14:105854649|105855007 hsa-miR-328-5p 0 0 1
chr14:105854649|105855007 hsa-miR-328-3p 0 0 1
chr14:105854649|105855007 hsa-miR-326 0 1 1
chr14:105854649|105855007 hsa-miR-608 0 1 1
chr14:105854649|105855007 hsa-miR-612 0 0 1
chr14:105854649|105855007 hsa-miR-623 0 1 1
chr14:105854649|105855007 hsa-miR-632 0 0 1
chr14:105854649|105855007 hsa-miR-637 0 0 1
chr14:105854649|105855007 hsa-miR-646 0 1 1
chr14:105854649|105855007 hsa-miR-934 0 0 1
chr14:105854649|105855007 hsa-miR-1226-5p 0 0 1
chr14:105854649|105855007 hsa-miR-1226-3p 0 0 1
chr14:105854649|105855007 hsa-miR-1231 0 1 1
chr14:105854649|105855007 hsa-miR-1236-5p 0 0 1
chr14:105854649|105855007 hsa-miR-1236-3p 0 0 1
chr14:105854649|105855007 hsa-miR-663b 0 1 1
chr14:105854649|105855007 hsa-miR-1291 0 0 1
chr14:105854649|105855007 hsa-miR-486-3p 0 0 1
chr14:105854649|105855007 hsa-miR-513a-5p 0 0 1
chr14:105854649|105855007 hsa-miR-324-3p 1 1 1
chr14:105854649|105855007 hsa-miR-483-3p 0 1 1
chr14:105854649|105855007 hsa-miR-330-5p 0 0 1
chr14:105854649|105855007 hsa-miR-220b 0 0 1
chr14:105854649|105855007 hsa-miR-550 0 0 1
chr14:105854649|105855007 hsa-miR-220c 0 0 1
chr14:105854649|105855007 hsa-miR-1285 0 0 1
chr14:105854649|105855007 hsa-miR-661 0 1 0
chr14:105854649|105855007 hsa-miR-1299 0 1 0
chr14:105854649|105855007 hsa-miR-1538 1 1 0
chr14:105854649|105855007 hsa-miR-1913 1 1 0
chr14:105854649|105855007 hsa-miR-1976 1 0 0
chr14:105854649|105855007 hsa-miR-2110 0 1 0
chr14:105854649|105855007 hsa-miR-4252 0 1 0
chr14:105854649|105855007 hsa-miR-4286 0 1 0
chr14:105854649|105855007 hsa-miR-4292 0 1 0
chr14:105854649|105855007 hsa-miR-3978 0 1 0
chr14:105854649|105855007 hsa-miR-4734 0 1 0
chr14:105854649|105855007 hsa-miR-4785 0 1 0
chr14:105854649|105855007 hsa-miR-6860 0 1 0
chr14:105854649|105855007 hsa-miR-7703 0 1 0
chr14:105854649|105855007 hsa-miR-8089 0 1 0
chr14:105854649|105855007 hsa-miR-12127 0 1 0
chr14:105854649|105855007 hsa-miR-6749-3p 1 1 0
chr14:105854649|105855007 hsa-miR-4747-3p 0 1 0
chr14:105854649|105855007 hsa-miR-18a-3p 0 1 0
chr14:105854649|105855007 hsa-miR-1247-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6836-3p 1 0 0
chr14:105854649|105855007 hsa-miR-149-5p 1 0 0
chr14:105854649|105855007 hsa-miR-6720-5p 1 0 0
chr14:105854649|105855007 hsa-miR-766-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6875-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6842-3p 1 0 0
chr14:105854649|105855007 hsa-miR-3189-5p 1 0 0
chr14:105854649|105855007 hsa-miR-877-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6728-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6774-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4763-5p 1 0 0
chr14:105854649|105855007 hsa-miR-7108-3p 0 1 0
chr14:105854649|105855007 hsa-miR-4707-3p 1 0 0
chr14:105854649|105855007 hsa-miR-3944-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6803-3p 1 0 0
chr14:105854649|105855007 hsa-miR-7113-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6861-3p 1 1 0
chr14:105854649|105855007 hsa-miR-4787-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6769a-3p 1 1 0
chr14:105854649|105855007 hsa-miR-6825-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4646-3p 1 1 0
chr14:105854649|105855007 hsa-miR-4707-5p 0 1 0
chr14:105854649|105855007 hsa-miR-1237-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6785-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4758-3p 1 0 0
chr14:105854649|105855007 hsa-miR-1180-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6871-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6814-5p 0 1 0
chr14:105854649|105855007 hsa-miR-4632-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6826-3p 0 1 0
chr14:105854649|105855007 hsa-miR-5088-3p 0 1 0
chr14:105854649|105855007 hsa-miR-4749-3p 1 1 0
chr14:105854649|105855007 hsa-miR-4649-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6777-3p 0 1 0
chr14:105854649|105855007 hsa-miR-1292-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6760-3p 1 1 0
chr14:105854649|105855007 hsa-miR-130b-5p 1 0 0
chr14:105854649|105855007 hsa-miR-4433a-5p 1 0 0
chr14:105854649|105855007 hsa-miR-1229-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4433b-5p 1 0 0
chr14:105854649|105855007 hsa-miR-6812-3p 1 0 0
chr14:105854649|105855007 hsa-miR-1298-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6890-3p 1 1 0
chr14:105854649|105855007 hsa-miR-4787-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6502-3p 0 1 0
chr14:105854649|105855007 hsa-miR-3152-5p 0 1 0
chr14:105854649|105855007 hsa-miR-4763-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6775-5p 1 1 0
chr14:105854649|105855007 hsa-miR-4685-3p 0 1 0
chr14:105854649|105855007 hsa-miR-5189-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6862-5p 0 1 0
chr14:105854649|105855007 hsa-miR-10526-3p 0 1 0
chr14:105854649|105855007 hsa-miR-1909-3p 1 0 0
chr14:105854649|105855007 hsa-miR-3187-5p 0 1 0
chr14:105854649|105855007 hsa-miR-10396a-3p 1 0 0
chr14:105854649|105855007 hsa-miR-10396b-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6731-5p 0 1 0
chr14:105854649|105855007 hsa-miR-1285-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6799-3p 1 1 0
chr14:105854649|105855007 hsa-miR-1914-3p 0 1 0
chr14:105854649|105855007 hsa-miR-4700-5p 0 1 0
chr14:105854649|105855007 hsa-miR-4667-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6791-5p 1 0 0
chr14:105854649|105855007 hsa-miR-769-3p 0 1 0
chr14:105854649|105855007 hsa-miR-4757-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6511a-3p 0 1 0
chr14:105854649|105855007 hsa-miR-10401-3p 1 1 0
chr14:105854649|105855007 hsa-miR-6801-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6775-3p 1 0 0
chr14:105854649|105855007 hsa-miR-10392-3p 1 0 0
chr14:105854649|105855007 hsa-miR-6511b-3p 1 1 0
chr14:105854649|105855007 hsa-miR-6769b-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4690-3p 0 1 0
chr14:105854649|105855007 hsa-miR-6807-3p 1 0 0
chr14:105854649|105855007 hsa-miR-4524a-5p 0 1 0
chr14:105854649|105855007 hsa-miR-6835-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:105854649|105855007
ORF Type ORF1
Protein Length 74
Nucleotide Length 222
Protein Sequence MWAGVESPFPQLPRQRGSEGCFPPCPRGQGRSQGVQEEGQEWGLPLGREMVCFSGEGRSVWVTVHVNLSPEFQS
Nucleotide Sequence CTGTGGGCTGGGGTTGAGTCCCCTTTTCCCCAGTTGCCCAGACAACGGGGGAGTGAGGGGTGCTTTCCACCATGCCCCAGAGGCCAAGGGAGGTCCCAGGGAGTGCAGGAAGAGGGGCAAGAGTGGGGCCTACCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTGAACCTCTCCCCGGAATTCCAGTCA
CircID chr14:105854649|105855007
ORF Type ORF2
Protein Length 86
Nucleotide Length 261
Protein Sequence MCRATPVNRDGGEGGAVGGPACGLGLSPLFPSCPDNGGVRGAFHHAPEAKGGPRECRKRGKSGAYPWAGRWSASVARAGLCGSRCT
Nucleotide Sequence CTGTGCAGGGCCACCCCTGTGAACAGAGATGGTGGTGAGGGCGGGGCAGTGGGGGGACCAGCCTGTGGGCTGGGGTTGAGTCCCCTTTTCCCCAGTTGCCCAGACAACGGGGGAGTGAGGGGTGCTTTCCACCATGCCCCAGAGGCCAAGGGAGGTCCCAGGGAGTGCAGGAAGAGGGGCAAGAGTGGGGCCTACCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTGA
CircID chr14:105854649|105855007
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MPQRPREVPGSAGRGARVGPTLGPGDGLLQWRGQVCVGHGAREPLPGIPVI
Nucleotide Sequence ATGCCCCAGAGGCCAAGGGAGGTCCCAGGGAGTGCAGGAAGAGGGGCAAGAGTGGGGCCTACCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTGAACCTCTCCCCGGAATTCCAGTCATC
CircID chr14:105854649|105855007
ORF Type ORF4
Protein Length 91
Nucleotide Length 276
Protein Sequence MPSPLKQTISRPKGRPHSCPSSCTPWDLPWPLGHGGKHPSLPRCLGNWGKGDSTPAHRLVPPLPRPHHHLCSQGWPCTGPMSTCCHQPGSS
Nucleotide Sequence CTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGGGTAGGCCCCACTCTTGCCCCTCTTCCTGCACTCCCTGGGACCTCCCTTGGCCTCTGGGGCATGGTGGAAAGCACCCCTCACTCCCCCGTTGTCTGGGCAACTGGGGAAAAGGGGACTCAACCCCAGCCCACAGGCTGGTCCCCCCACTGCCCCGCCCTCACCACCATCTCTGTTCACAGGGGTGGCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGA
CircID chr14:105854649|105855007
ORF Type ORF5
Protein Length 69
Nucleotide Length 207
Protein Sequence MVESTPHSPVVWATGEKGTQPQPTGWSPHCPALTTISVHRGGPAQARCLLAATSPGAAEPAGVGHHHVP
Nucleotide Sequence ATGGTGGAAAGCACCCCTCACTCCCCCGTTGTCTGGGCAACTGGGGAAAAGGGGACTCAACCCCAGCCCACAGGCTGGTCCCCCCACTGCCCCGCCCTCACCACCATCTCTGTTCACAGGGGTGGCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACGTGCCT
CircID chr14:105854649|105855007
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MEFRGEVHVHRDPHRPALATEADHLPAQG
Nucleotide Sequence CTGGAATTCCGGGGAGAGGTTCACGTGCACCGTGACCCACACAGACCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGGGTAG
CircID chr14:105854649|105855007
ORF Type ORF7
Protein Length 85
Nucleotide Length 255
Protein Sequence MPLFLHSLGPPLASGAWWKAPLTPPLSGQLGKRGLNPSPQAGPPTAPPSPPSLFTGVALHRPDVYLLPPAREQLNLRESATITCL
Nucleotide Sequence TTGCCCCTCTTCCTGCACTCCCTGGGACCTCCCTTGGCCTCTGGGGCATGGTGGAAAGCACCCCTCACTCCCCCGTTGTCTGGGCAACTGGGGAAAAGGGGACTCAACCCCAGCCCACAGGCTGGTCCCCCCACTGCCCCGCCCTCACCACCATCTCTGTTCACAGGGGTGGCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACGTGCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab